Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00613 ATGGGATCCACGGCCGCCGTCTACTACTTCTTCTTCTTCCTCCTCCTTCTTCAATGTCTTTTCGGCTGTTCGAAGAATGTTTACATTGTTCACATGAAAAACCATGTGAAGCCGTCGCTCTATGCTACCCACCATGACTGGTACTCCGCTCAACTCCAATCTCTCTCCACCTCAGCCGAATCTGATTTTTTGTTATACTCCTACACCGCCGCGTATCATGGCTTTGCTGCCACTCTGGATCCAGATCAAGCAGAATTGCTACGCCAATCCGATGCTGTGGTTGGTGTTTATGAAGACACTCTTTATCACCTCCACACTACTCGAACTCCTCAGTTTCTTGGTCTGGACACTCAATCTGGTCTATGGCAAGGTCACGACGCTCAAGATTTTAACAGAGCCGCTCACGATGTTATCATTGGACTACTCGACACCGGGGTTTGGCCGGAGTCCAAAAGCTTCGACGATTCGAATTTGCCTCAGATCCCAAACAGGTGGCGCGGCAAATGCGAATCAGGACCAGATTTCAGCTCCTCCCTCTGCAACAAGAAACTCATTGGAGCGCGTAGCTTCTCGAAAGGATATCGTATGGCATCTGGTGGTGGTACTCTGTTAAAAAAACCCAGAGAAATTGAATCGCCCAGAGACCAAGAAGGCCACGGTACTCACACAGCAAGTACCGCCGCTGGATCGCACGTCGCCAACGCTAGTTTACTCGGCTACGCCAGCGGTACGGCTCGGGGGATGGCTATTGACGCTCGAGTCGCTAGCTACAAAGTGTGCTGGTCCACTGGTTGCTTTGGCTCGGACATACTCGCCGGTATAGATCAAGCAATAATGGACGGCGTCGATGTACTCTCCCTCTCTTTAGGCGGTGGGTCTGCTCCCTTCTACAGAGACACCATTGCCATTGGAGCATTTTCGGCAATGGAGAGAGGTATTTTTGTTTCGTGTTCGGCCGGAAATAGTGGGCCCAATAGAGCGTCGCTTACGAACTTGGCACCGTGGATCATGACGGTTGGAGCCGGAACTCTCGATAGGGATTTCCCGGCTTATGTCCAACTGGGAAACAGAAAACGGTTCACCGGAGAATCGCTATATAGCGGTAAAGGGATGGGAATACAGGGGGTGGCCTTGGTTTACGGGAAGGGGAGCAATAGCTCTAGCAACATGTGCTTACCCGGATCACTTGATCCGGACATTGTACGAGGAAAAGTGGTCGTCTGTGACAGAGGAATCAACGCTCGTGTGGAGAAGGGAGCTGTGGTGCGCGATGCAGGTGGAGTGGGAATGATTCTAGCCAATACAGCGGCTAATGGCGAGGAGATGGTGGCGGACAGCCACTTGTTACCGGCAGTTGCGGTGGGGAGAAAGGTTGGTGATTTGATCAGGGAGTATGTGCGGTCAGATCGACATCCTACGGCAGTGCTGAGTTTTGGTGGGACGGAACTGAATGTGCGCCCGTCGCCCGTGGTTGCGGCGTTTAGTTCTAGAGGGCCAAATCTAGTAACTCCCCAGATCTTGAAGCCGGACGTCATCGGGCCCGGCGTTAACATCATCGCCGCATGGTCGGAGGCAATCGGACCAACCGGATTAGAGAGCGACAAAAGGAAGACTCTCTTCAACATCATGTCTGGTACGTCCATGTCTTGCCCACACATCAGCGGATTGGCTGCGTTGCTGAAAGCGGCTCATCCGGAATGGAGCCCTAGCGCAATCAAATCAGCTCTAATGACCACAGCTTACACACTTGACAACACCAAATCCCCTCTCAGAGACGCCGCAGACGGCTCCTTCTCCAATCCGTGGGCGCACGGGGCTGGCCATGTGGACCCTCAGAAAGCCGTGTCGCCCGGCCTCGTCTACGACCTCTCTCCCAGCGATTACATTGCATTTCTGTGCTCTTTAGATTACTCCCTCGACCGCGTTCAATCAATCGTCAAACACCCGAATGTTACTTGCTCTAGAAAATTCTCCGACCCCGGAAATCTTAATTACCCTTCGTTCTCCGTTGTGTTTCGGAGTAAAAGAGTCGTCCGATATACCCGTGAATTGACCAATGTCGGGTCAGCACCCTCTGTGTACCGGGTCGCAGTTACGGCCCCATCGACCGTCTCTGTAACAGTGAGGCCGACGAGGCTGGCGTTTCAAAAGGTGGGCGAGAAGAAGCGGTACACGGTGACGTTCGTGGGGAGTAAAACCGGCGGTCCGACTACAAAGTTCGATTTCGGATCAATCATGTGGAGCAACCGGCAGCATCAAGTTAGAAGCCCAGTTGCTTTTGCGTGGACAATGCTATGA 2298 52.65 MGSTAAVYYFFFFLLLLQCLFGCSKNVYIVHMKNHVKPSLYATHHDWYSAQLQSLSTSAESDFLLYSYTAAYHGFAATLDPDQAELLRQSDAVVGVYEDTLYHLHTTRTPQFLGLDTQSGLWQGHDAQDFNRAAHDVIIGLLDTGVWPESKSFDDSNLPQIPNRWRGKCESGPDFSSSLCNKKLIGARSFSKGYRMASGGGTLLKKPREIESPRDQEGHGTHTASTAAGSHVANASLLGYASGTARGMAIDARVASYKVCWSTGCFGSDILAGIDQAIMDGVDVLSLSLGGGSAPFYRDTIAIGAFSAMERGIFVSCSAGNSGPNRASLTNLAPWIMTVGAGTLDRDFPAYVQLGNRKRFTGESLYSGKGMGIQGVALVYGKGSNSSSNMCLPGSLDPDIVRGKVVVCDRGINARVEKGAVVRDAGGVGMILANTAANGEEMVADSHLLPAVAVGRKVGDLIREYVRSDRHPTAVLSFGGTELNVRPSPVVAAFSSRGPNLVTPQILKPDVIGPGVNIIAAWSEAIGPTGLESDKRKTLFNIMSGTSMSCPHISGLAALLKAAHPEWSPSAIKSALMTTAYTLDNTKSPLRDAADGSFSNPWAHGAGHVDPQKAVSPGLVYDLSPSDYIAFLCSLDYSLDRVQSIVKHPNVTCSRKFSDPGNLNYPSFSVVFRSKRVVRYTRELTNVGSAPSVYRVAVTAPSTVSVTVRPTRLAFQKVGEKKRYTVTFVGSKTGGPTTKFDFGSIMWSNRQHQVRSPVAFAWTML 765
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9271603 9273900 + Bma006133.1 Bma11g00613 91015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00613 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Bma11g00613 765 PANTHER CUCUMISIN-RELATED 17 762 - -
Bma11g00613 765 SUPERFAMILY Subtilisin-like 104 619 IPR036852 GO:0004252|GO:0006508
Bma11g00613 765 Pfam Subtilase family 136 588 IPR000209 GO:0006508|GO:0008236
Bma11g00613 765 Pfam PA domain 388 461 IPR003137 -
Bma11g00613 765 Pfam Fibronectin type-III domain 662 759 IPR041469 -
Bma11g00613 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 22 105 IPR037045 -
Bma11g00613 765 Gene3D Peptidase S8/S53 domain 136 628 IPR036852 GO:0004252|GO:0006508
Bma11g00613 765 MobiDBLite consensus disorder prediction 201 226 - -
Bma11g00613 765 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Bma11g00613 765 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
Bma11g00613 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
Bma11g00613 765 Pfam Peptidase inhibitor I9 27 105 IPR010259 -
Bma11g00613 765 Gene3D - 632 762 - -
Bma11g00613 765 SUPERFAMILY Protease propeptides/inhibitors 26 104 - -
Bma11g00613 765 CDD PA_subtilisin_like 351 474 - -
Bma11g00613 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 17 762 IPR045051 -
Bma11g00613 765 Gene3D - 345 483 - -
Bma11g00613 765 CDD Peptidases_S8_3 102 581 IPR034197 -
Bma11g00613 765 ProSiteProfiles Serine proteases, subtilase domain profile. 118 615 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00357 Bma-Chr6:8683487 Bma11g00613 Bma-Chr11:9271603 0 dispersed
Bma06g01023 Bma-Chr6:46887749 Bma11g00613 Bma-Chr11:9271603 1.85E-111 dispersed
Bma11g00613 Bma-Chr11:9271603 Bma14g02104 Bma-Chr14:44538335 0 dispersed
Bma07g01618 Bma-Chr7:51708611 Bma11g00613 Bma-Chr11:9271603 0 transposed
Bma13g00716 Bma-Chr13:21112042 Bma11g00613 Bma-Chr11:9271603 0 transposed
Bma01g00262 Bma-Chr1:2206754 Bma11g00613 Bma-Chr11:9271603 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00613 - - csv:101209781 1221.07