Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00619 | ATGGCAACAGCTCAGCTTACTGCATCTACCATCTCAGCCAGGAGTCTGCCTTCGTTTGAGGGTCTTCGTCCTTCCGCTAACAAGTTTTCTCCCTTCTTTGAAAATGTGAGGATGGTTGGACTCGCCAATCGTCCTTTCCGAAGTCTGGTGGTTAAAGCTGCCACTATCATTACTCCCAAGTACACTTCGGTTAAGCCTTTGGGTGATAGAGTACTTGTTAAGACAAAAAATGCAGAAGAAAAGACTCAGGGAGGTATTTTGCTTCCAACTGCAGCTCAGTCTAAACCTCAAGGGGGTGAAGTGGTTGCTGTTGGTGAAGGCAAAACCATTGGAAAGACCAAAGTGGATATTTGTGTTAAGACTGGTGCTCAAGTTGTTTATTCCAAATATGCGGGGACAGAGTTGGAGTTCAATGGCTCAAAGCATCTTATCTTGAAGGAGGACGACGTTGTTGGCATACTAGAAACAGATGATGTGAAGGATCTAAAGCCCTTGAATGACAGAGTTCTGATCAAGGTTGCCGAAGCTGAGGAGAAAACAGCTGGAGGATTGTTGCTGACAGAAGCAACCAAGGAGAAGCCTTCCATTGGCACGGTGGTGGCTGTTGGGCCTGGATCACTGGATGAGGAAGGGAACAGGAAGGCATTATCTGTGGCCGCCGGCAGCACCGTGATGTACTCCAAGTATGCCGGCAATGACTTCAAGGGCAAGGACGGTTTGGAATATATAGTTTTACGGGTTTCAGATGTCATGGCTGTGCTTTCTTAG | 768 | 47.14 | MATAQLTASTISARSLPSFEGLRPSANKFSPFFENVRMVGLANRPFRSLVVKAATIITPKYTSVKPLGDRVLVKTKNAEEKTQGGILLPTAAQSKPQGGEVVAVGEGKTIGKTKVDICVKTGAQVVYSKYAGTELEFNGSKHLILKEDDVVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVVAVGPGSLDEEGNRKALSVAAGSTVMYSKYAGNDFKGKDGLEYIVLRVSDVMAVLS | 255 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9417553 | 9686952 | + | Bma030463 | Bma11g00619 | 91021 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00619 | 255 | PANTHER | GROES CHAPERONIN | 1 | 255 | - | - | |
Bma11g00619 | 255 | SUPERFAMILY | GroES-like | 62 | 155 | IPR011032 | - | |
Bma11g00619 | 255 | ProSitePatterns | Chaperonins cpn10 signature. | 64 | 88 | IPR018369 | GO:0005524|GO:0006457 | |
Bma11g00619 | 255 | PIRSF | Cpn21 | 1 | 255 | IPR017416 | GO:0006457|GO:0046914|GO:1901671 | |
Bma11g00619 | 255 | Hamap | Co-chaperonin GroES [groES]. | 161 | 255 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | SUPERFAMILY | GroES-like | 161 | 254 | IPR011032 | - | |
Bma11g00619 | 255 | CDD | cpn10 | 162 | 254 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | PRINTS | 10kDa chaperonin signature | 241 | 254 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | PRINTS | 10kDa chaperonin signature | 219 | 231 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | PRINTS | 10kDa chaperonin signature | 162 | 177 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | PRINTS | 10kDa chaperonin signature | 184 | 205 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | SMART | Cpn10_2 | 63 | 154 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | SMART | Cpn10_2 | 161 | 254 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | PANTHER | 10 KDA HEAT SHOCK PROTEIN | 1 | 255 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | CDD | cpn10 | 63 | 154 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | Hamap | Co-chaperonin GroES [groES]. | 63 | 155 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | ProSitePatterns | Chaperonins cpn10 signature. | 162 | 186 | IPR018369 | GO:0005524|GO:0006457 | |
Bma11g00619 | 255 | Gene3D | GroES chaperonin | 157 | 255 | IPR037124 | GO:0006457 | |
Bma11g00619 | 255 | Gene3D | GroES chaperonin | 57 | 156 | IPR037124 | GO:0006457 | |
Bma11g00619 | 255 | Pfam | Chaperonin 10 Kd subunit | 162 | 253 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 | |
Bma11g00619 | 255 | Pfam | Chaperonin 10 Kd subunit | 64 | 153 | IPR020818 | GO:0005524|GO:0006457|GO:0140662 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00577 | Bma11g00619 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01109 | Bma-Chr6:47879048 | Bma11g00619 | Bma-Chr11:9417553 | 1.02E-07 | dispersed | |
Bma10g00240 | Bma-Chr10:2186031 | Bma11g00619 | Bma-Chr11:9417553 | 1.01E-08 | dispersed | |
Bma11g00619 | Bma-Chr11:9417553 | Bma07g00577 | Bma-Chr7:8136672 | 6.80E-98 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00619 | K04078 | - | mnt:21387593 | 404.06 |