Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00619 ATGGCAACAGCTCAGCTTACTGCATCTACCATCTCAGCCAGGAGTCTGCCTTCGTTTGAGGGTCTTCGTCCTTCCGCTAACAAGTTTTCTCCCTTCTTTGAAAATGTGAGGATGGTTGGACTCGCCAATCGTCCTTTCCGAAGTCTGGTGGTTAAAGCTGCCACTATCATTACTCCCAAGTACACTTCGGTTAAGCCTTTGGGTGATAGAGTACTTGTTAAGACAAAAAATGCAGAAGAAAAGACTCAGGGAGGTATTTTGCTTCCAACTGCAGCTCAGTCTAAACCTCAAGGGGGTGAAGTGGTTGCTGTTGGTGAAGGCAAAACCATTGGAAAGACCAAAGTGGATATTTGTGTTAAGACTGGTGCTCAAGTTGTTTATTCCAAATATGCGGGGACAGAGTTGGAGTTCAATGGCTCAAAGCATCTTATCTTGAAGGAGGACGACGTTGTTGGCATACTAGAAACAGATGATGTGAAGGATCTAAAGCCCTTGAATGACAGAGTTCTGATCAAGGTTGCCGAAGCTGAGGAGAAAACAGCTGGAGGATTGTTGCTGACAGAAGCAACCAAGGAGAAGCCTTCCATTGGCACGGTGGTGGCTGTTGGGCCTGGATCACTGGATGAGGAAGGGAACAGGAAGGCATTATCTGTGGCCGCCGGCAGCACCGTGATGTACTCCAAGTATGCCGGCAATGACTTCAAGGGCAAGGACGGTTTGGAATATATAGTTTTACGGGTTTCAGATGTCATGGCTGTGCTTTCTTAG 768 47.14 MATAQLTASTISARSLPSFEGLRPSANKFSPFFENVRMVGLANRPFRSLVVKAATIITPKYTSVKPLGDRVLVKTKNAEEKTQGGILLPTAAQSKPQGGEVVAVGEGKTIGKTKVDICVKTGAQVVYSKYAGTELEFNGSKHLILKEDDVVGILETDDVKDLKPLNDRVLIKVAEAEEKTAGGLLLTEATKEKPSIGTVVAVGPGSLDEEGNRKALSVAAGSTVMYSKYAGNDFKGKDGLEYIVLRVSDVMAVLS 255
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 9417553 9686952 + Bma030463 Bma11g00619 91021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00619 255 PANTHER GROES CHAPERONIN 1 255 - -
Bma11g00619 255 SUPERFAMILY GroES-like 62 155 IPR011032 -
Bma11g00619 255 ProSitePatterns Chaperonins cpn10 signature. 64 88 IPR018369 GO:0005524|GO:0006457
Bma11g00619 255 PIRSF Cpn21 1 255 IPR017416 GO:0006457|GO:0046914|GO:1901671
Bma11g00619 255 Hamap Co-chaperonin GroES [groES]. 161 255 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 SUPERFAMILY GroES-like 161 254 IPR011032 -
Bma11g00619 255 CDD cpn10 162 254 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 PRINTS 10kDa chaperonin signature 241 254 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 PRINTS 10kDa chaperonin signature 219 231 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 PRINTS 10kDa chaperonin signature 162 177 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 PRINTS 10kDa chaperonin signature 184 205 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 SMART Cpn10_2 63 154 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 SMART Cpn10_2 161 254 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 PANTHER 10 KDA HEAT SHOCK PROTEIN 1 255 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 CDD cpn10 63 154 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 Hamap Co-chaperonin GroES [groES]. 63 155 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 ProSitePatterns Chaperonins cpn10 signature. 162 186 IPR018369 GO:0005524|GO:0006457
Bma11g00619 255 Gene3D GroES chaperonin 157 255 IPR037124 GO:0006457
Bma11g00619 255 Gene3D GroES chaperonin 57 156 IPR037124 GO:0006457
Bma11g00619 255 Pfam Chaperonin 10 Kd subunit 162 253 IPR020818 GO:0005524|GO:0006457|GO:0140662
Bma11g00619 255 Pfam Chaperonin 10 Kd subunit 64 153 IPR020818 GO:0005524|GO:0006457|GO:0140662
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00577 Bma11g00619 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g01109 Bma-Chr6:47879048 Bma11g00619 Bma-Chr11:9417553 1.02E-07 dispersed
Bma10g00240 Bma-Chr10:2186031 Bma11g00619 Bma-Chr11:9417553 1.01E-08 dispersed
Bma11g00619 Bma-Chr11:9417553 Bma07g00577 Bma-Chr7:8136672 6.80E-98 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00619 K04078 - mnt:21387593 404.06