Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00622 | CTTGAAAGCATATCCGAGGAAACTGCAGTCATTGAAAGAAAACAGACCTTTTTAAATTTCGTCCCATACATTCGATCCGGAGAGTGGTCGGACATTGGAGGTCGTTCTCACATGGAGGATACTCACATCTGCATTGGGAATTTGGCTAAGAAATTTGGTTATAATCTCACTGACGAAGCTATCTCTTTCTATGGCGTAAGTTCTCTCTCTAATCCCTTCAGAACCATCATTGAGAACTTTTTATTGAACTTAAAAAATCGAACCGGGATTGCTTATTTTCAGGTATTTGATGGTCATGGAGGAAGCGGTGCTGCAAAATTCGTGCGTGATCACTTACCGAGAGTTATTGTCGAAGATGCAGACTTTCCTTTGGAGCTCGAGAAGGTGATCACAAGGTCGTTTATGGAGACGGATGCTGCCTTTGCAAAAACATGCTCTGTCGAATCTTCCTTGAATATCATTTCTCGCAGGTCGTTGGTGGTGGCAAATGCCGGAGATTGTCGGGCAGTGCTTTCCCGGCGTGGAGGTGCAGTCGAAATGTCTAGAGACCACAGACCATGTTGTTCAAAAGAGAGGATAAGAATCGAGGCCTTGGGAGGATACATCGATGACGATTATCTAAACGGACAATTAGGCGTAACTCGGGCATTGGGTGATTGGCATCTAGAAGGGATGAAGGAATCAAGCGGAAAGGGTGGCCCACTTAGTGCAGAACCCGAACTTAAACTCACGACATTGACGACGGATGACGAATTCTTGATCATAGGCAGCGATGGAATATGGGATGTTTTCACGAGCCAAAACGCAGTCGATTTTGCTCGGAGGAGACTTCAAGAGCACAACGACGTGAAGTTGTGCTGCAAAGAAGTTGTCGAGGAAGCTGTAAAGCGACGGGCAGTGGATAATCTGACAGTTGTCATAGTGAGCTTTCACTTGGAGCCGCCTCAATCTTTGGCGGTCCAGAGGGGGAGAGTGAGGAGAAGCATATCAGAAGAGGGGCTGCAGAACCTTAAATTTCTGTTGGAAGGATAG | 1032 | 46.22 | LESISEETAVIERKQTFLNFVPYIRSGEWSDIGGRSHMEDTHICIGNLAKKFGYNLTDEAISFYGVSSLSNPFRTIIENFLLNLKNRTGIAYFQVFDGHGGSGAAKFVRDHLPRVIVEDADFPLELEKVITRSFMETDAAFAKTCSVESSLNIISRRSLVVANAGDCRAVLSRRGGAVEMSRDHRPCCSKERIRIEALGGYIDDDYLNGQLGVTRALGDWHLEGMKESSGKGGPLSAEPELKLTTLTTDDEFLIIGSDGIWDVFTSQNAVDFARRRLQEHNDVKLCCKEVVEEAVKRRAVDNLTVVIVSFHLEPPQSLAVQRGRVRRSISEEGLQNLKFLLEG | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 9801234 | 9802828 | + | Bma006158.1 | Bma11g00622 | 91024 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00622 | 343 | SMART | PP2C_4 | 15 | 308 | IPR001932 | - | |
Bma11g00622 | 343 | Pfam | Protein phosphatase 2C | 85 | 302 | IPR001932 | - | |
Bma11g00622 | 343 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 1 | 66 | - | - | |
Bma11g00622 | 343 | PANTHER | PROTEIN PHOSPHATASE 2C 27-RELATED | 77 | 331 | - | - | |
Bma11g00622 | 343 | ProSiteProfiles | PPM-type phosphatase domain profile. | 25 | 310 | IPR001932 | - | |
Bma11g00622 | 343 | CDD | PP2Cc | 24 | 310 | IPR001932 | - | |
Bma11g00622 | 343 | PANTHER | PROTEIN PHOSPHATASE 2C | 1 | 66 | IPR015655 | GO:0004722|GO:0006470 | |
Bma11g00622 | 343 | PANTHER | PROTEIN PHOSPHATASE 2C | 77 | 331 | IPR015655 | GO:0004722|GO:0006470 | |
Bma11g00622 | 343 | SUPERFAMILY | PP2C-like | 13 | 311 | IPR036457 | - | |
Bma11g00622 | 343 | Gene3D | - | 8 | 313 | IPR036457 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma06g00999 | Bma11g00622 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00034 | Bma-Chr2:353468 | Bma11g00622 | Bma-Chr11:9801234 | 1.22E-119 | dispersed | |
Bma11g00622 | Bma-Chr11:9801234 | Bma13g00101 | Bma-Chr13:1054087 | 2.33E-72 | dispersed | |
Bma11g00622 | Bma-Chr11:9801234 | Bma04g00294 | Bma-Chr4:2356598 | 4.18E-103 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58053 | PF00481 | PP2C | 1.40E-57 | CL0238 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00622 | K14803 | - | fve:101296420 | 457.988 |