Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00636 | ATGGTAAATAAAGAAGGAAGAGACGGCCATTCTGGTTTACTTCACGGGAAATATGAACTGGGTCGGCTTCTCGGACATGGTACTTTCGCCAAGGTTTATCTTGCTCGGAATGTACAGTCCGGCAAGACCGTGGCTATGAAAGTTGTTGGAAAAGAAAAGGTAATAAAGGTAGGAATGATGGAGCAGATTAAAAGGGAAATCTCTCTGATGAAGATGGTGAAGCATCCGAATATCGTAGAGCTTCACGAGGTTATGGCGAGCAAATCCAAGATCTATTTCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCGCTAAGGTCGCCAAAGGACGCCTGAGGGAAGACGTCGCTAGAGTCTATTTCCAGCAGCTGATTTCGGCGATCGATTTTTGCCATAGTCGCGGCGTTTTCCACAGGGATTTGAAGCCCGAAAATCTCCTTCTCGACGAAGATGGAAATCTCAAAGTTACCGATTTTGGACTCAGTGCCTTCTCTGAGCAGTTGCAGAACGGATTGCTCCACACAAGCTGCGGAACTCCAGCGTATGTCGCGCCGGAAGTGATCGGAAAAATGGGCTACGACGGCGCAAAAGCCGATCTATGGTCCTGCGGCGTCATTCTCTACGTACTCCTTGCCGGATTTCTTCCTTTTCAGGATGATAATCTGGTCGCCATGTACAGAAAAATCTACAAGGGCGACTTCAAATGCCCGCCATGGTTCTCTCCTGATGCTCGTAGACTCATTATTAAGCTCTTGGACCCGAACCCATCGACCCGGATAACAACAGAAATGATTATGGAATCCTCCTGGTTTAAGAAATCCGTTCCGAAATCCATAATCACAAAAGAGGAGCAGGAATTCGAAAAATGCGAGAAAATTACGAAGGAGCGAGAGACCTTAAATGCATTTCACATAATTTCGTTATCGCAGGGTTTTGATTTATCGCCATTGTTCGAGGGGAAGAAGAGGGAGGAGAAAGAGGAGCTGAGATTCGCGACGACAAGGCCGGCGAGCAGTGTGATATCGAAGCTGGAGGAGGTTGCAGAGGCCGTGAAGTTCGAGGTTCAGAAGAGCGACTCCATGGTAAGGCTGAAAGGGAAGGAGAGAGGAAGAAAAGGGAAGCTGGCCATAGCGGCGGAGATATTCGCCATGACGCCTTCGTTTCTGGTGGTGGAGGTGAAGAAGGACCATGGCGATACGTTCGAATACAACCAGTTCTGCAACAAGGAGCTTCGCCCCGCTCTCAAAGACATTCTATGGAACTCCCCTTCTGAAAATTCCATGTCTGCTGCTTGA | 1296 | 48.84 | MVNKEGRDGHSGLLHGKYELGRLLGHGTFAKVYLARNVQSGKTVAMKVVGKEKVIKVGMMEQIKREISLMKMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAKGRLREDVARVYFQQLISAIDFCHSRGVFHRDLKPENLLLDEDGNLKVTDFGLSAFSEQLQNGLLHTSCGTPAYVAPEVIGKMGYDGAKADLWSCGVILYVLLAGFLPFQDDNLVAMYRKIYKGDFKCPPWFSPDARRLIIKLLDPNPSTRITTEMIMESSWFKKSVPKSIITKEEQEFEKCEKITKERETLNAFHIISLSQGFDLSPLFEGKKREEKEELRFATTRPASSVISKLEEVAEAVKFEVQKSDSMVRLKGKERGRKGKLAIAAEIFAMTPSFLVVEVKKDHGDTFEYNQFCNKELRPALKDILWNSPSENSMSAA | 431 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 10971667 | 10972962 | - | Bma006180.2 | Bma11g00636 | 91038 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00636 | 431 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 9 | 428 | - | - | |
Bma11g00636 | 431 | SUPERFAMILY | Protein kinase-like (PK-like) | 15 | 285 | IPR011009 | - | |
Bma11g00636 | 431 | Gene3D | Kinase associated domain 1, KA1 | 299 | 421 | - | - | |
Bma11g00636 | 431 | Pfam | NAF domain | 298 | 357 | IPR004041 | GO:0007165 | |
Bma11g00636 | 431 | CDD | STKc_SnRK3 | 17 | 270 | - | - | |
Bma11g00636 | 431 | Coils | Coil | 428 | 431 | - | - | |
Bma11g00636 | 431 | SMART | serkin_6 | 18 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00636 | 431 | Gene3D | Phosphorylase Kinase; domain 1 | 13 | 102 | - | - | |
Bma11g00636 | 431 | PANTHER | - | 9 | 428 | - | - | |
Bma11g00636 | 431 | ProSiteProfiles | NAF domain profile. | 295 | 319 | IPR018451 | GO:0007165 | |
Bma11g00636 | 431 | CDD | CIPK_C | 301 | 416 | - | - | |
Bma11g00636 | 431 | ProSiteProfiles | Protein kinase domain profile. | 18 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00636 | 431 | Pfam | Protein kinase domain | 18 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00636 | 431 | Gene3D | Transferase(Phosphotransferase) domain 1 | 103 | 298 | - | - | |
Bma11g00636 | 431 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 136 | 148 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00636 | 431 | ProSitePatterns | Protein kinases ATP-binding region signature. | 24 | 51 | IPR017441 | GO:0005524 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g02707 | Bma-Chr1:84475827 | Bma11g00636 | Bma-Chr11:10971667 | 4.54E-66 | dispersed | |
Bma04g00755 | Bma-Chr4:8119226 | Bma11g00636 | Bma-Chr11:10971667 | 5.44E-133 | dispersed | |
Bma07g01020 | Bma-Chr7:40790772 | Bma11g00636 | Bma-Chr11:10971667 | 0 | dispersed | |
Bma11g00636 | Bma-Chr11:10971667 | Bma11g00993 | Bma-Chr11:45126478 | 2.15E-170 | dispersed | |
Bma14g01563 | Bma-Chr14:32256749 | Bma11g00636 | Bma-Chr11:10971667 | 3.73E-136 | dispersed | |
Bma11g00636 | Bma-Chr11:10971667 | Bma07g00833 | Bma-Chr7:27670098 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66789 | PF00069 | Pkinase | 1.80E-72 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00636 | - | K07198 | csv:101211847 | 717.227 |