Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00636 ATGGTAAATAAAGAAGGAAGAGACGGCCATTCTGGTTTACTTCACGGGAAATATGAACTGGGTCGGCTTCTCGGACATGGTACTTTCGCCAAGGTTTATCTTGCTCGGAATGTACAGTCCGGCAAGACCGTGGCTATGAAAGTTGTTGGAAAAGAAAAGGTAATAAAGGTAGGAATGATGGAGCAGATTAAAAGGGAAATCTCTCTGATGAAGATGGTGAAGCATCCGAATATCGTAGAGCTTCACGAGGTTATGGCGAGCAAATCCAAGATCTATTTCGCCATGGAGCTCGTCCGCGGCGGCGAGCTCTTCGCTAAGGTCGCCAAAGGACGCCTGAGGGAAGACGTCGCTAGAGTCTATTTCCAGCAGCTGATTTCGGCGATCGATTTTTGCCATAGTCGCGGCGTTTTCCACAGGGATTTGAAGCCCGAAAATCTCCTTCTCGACGAAGATGGAAATCTCAAAGTTACCGATTTTGGACTCAGTGCCTTCTCTGAGCAGTTGCAGAACGGATTGCTCCACACAAGCTGCGGAACTCCAGCGTATGTCGCGCCGGAAGTGATCGGAAAAATGGGCTACGACGGCGCAAAAGCCGATCTATGGTCCTGCGGCGTCATTCTCTACGTACTCCTTGCCGGATTTCTTCCTTTTCAGGATGATAATCTGGTCGCCATGTACAGAAAAATCTACAAGGGCGACTTCAAATGCCCGCCATGGTTCTCTCCTGATGCTCGTAGACTCATTATTAAGCTCTTGGACCCGAACCCATCGACCCGGATAACAACAGAAATGATTATGGAATCCTCCTGGTTTAAGAAATCCGTTCCGAAATCCATAATCACAAAAGAGGAGCAGGAATTCGAAAAATGCGAGAAAATTACGAAGGAGCGAGAGACCTTAAATGCATTTCACATAATTTCGTTATCGCAGGGTTTTGATTTATCGCCATTGTTCGAGGGGAAGAAGAGGGAGGAGAAAGAGGAGCTGAGATTCGCGACGACAAGGCCGGCGAGCAGTGTGATATCGAAGCTGGAGGAGGTTGCAGAGGCCGTGAAGTTCGAGGTTCAGAAGAGCGACTCCATGGTAAGGCTGAAAGGGAAGGAGAGAGGAAGAAAAGGGAAGCTGGCCATAGCGGCGGAGATATTCGCCATGACGCCTTCGTTTCTGGTGGTGGAGGTGAAGAAGGACCATGGCGATACGTTCGAATACAACCAGTTCTGCAACAAGGAGCTTCGCCCCGCTCTCAAAGACATTCTATGGAACTCCCCTTCTGAAAATTCCATGTCTGCTGCTTGA 1296 48.84 MVNKEGRDGHSGLLHGKYELGRLLGHGTFAKVYLARNVQSGKTVAMKVVGKEKVIKVGMMEQIKREISLMKMVKHPNIVELHEVMASKSKIYFAMELVRGGELFAKVAKGRLREDVARVYFQQLISAIDFCHSRGVFHRDLKPENLLLDEDGNLKVTDFGLSAFSEQLQNGLLHTSCGTPAYVAPEVIGKMGYDGAKADLWSCGVILYVLLAGFLPFQDDNLVAMYRKIYKGDFKCPPWFSPDARRLIIKLLDPNPSTRITTEMIMESSWFKKSVPKSIITKEEQEFEKCEKITKERETLNAFHIISLSQGFDLSPLFEGKKREEKEELRFATTRPASSVISKLEEVAEAVKFEVQKSDSMVRLKGKERGRKGKLAIAAEIFAMTPSFLVVEVKKDHGDTFEYNQFCNKELRPALKDILWNSPSENSMSAA 431
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 10971667 10972962 - Bma006180.2 Bma11g00636 91038
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00636 431 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 428 - -
Bma11g00636 431 SUPERFAMILY Protein kinase-like (PK-like) 15 285 IPR011009 -
Bma11g00636 431 Gene3D Kinase associated domain 1, KA1 299 421 - -
Bma11g00636 431 Pfam NAF domain 298 357 IPR004041 GO:0007165
Bma11g00636 431 CDD STKc_SnRK3 17 270 - -
Bma11g00636 431 Coils Coil 428 431 - -
Bma11g00636 431 SMART serkin_6 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00636 431 Gene3D Phosphorylase Kinase; domain 1 13 102 - -
Bma11g00636 431 PANTHER - 9 428 - -
Bma11g00636 431 ProSiteProfiles NAF domain profile. 295 319 IPR018451 GO:0007165
Bma11g00636 431 CDD CIPK_C 301 416 - -
Bma11g00636 431 ProSiteProfiles Protein kinase domain profile. 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00636 431 Pfam Protein kinase domain 18 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00636 431 Gene3D Transferase(Phosphotransferase) domain 1 103 298 - -
Bma11g00636 431 ProSitePatterns Serine/Threonine protein kinases active-site signature. 136 148 IPR008271 GO:0004672|GO:0006468
Bma11g00636 431 ProSitePatterns Protein kinases ATP-binding region signature. 24 51 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02707 Bma-Chr1:84475827 Bma11g00636 Bma-Chr11:10971667 4.54E-66 dispersed
Bma04g00755 Bma-Chr4:8119226 Bma11g00636 Bma-Chr11:10971667 5.44E-133 dispersed
Bma07g01020 Bma-Chr7:40790772 Bma11g00636 Bma-Chr11:10971667 0 dispersed
Bma11g00636 Bma-Chr11:10971667 Bma11g00993 Bma-Chr11:45126478 2.15E-170 dispersed
Bma14g01563 Bma-Chr14:32256749 Bma11g00636 Bma-Chr11:10971667 3.73E-136 dispersed
Bma11g00636 Bma-Chr11:10971667 Bma07g00833 Bma-Chr7:27670098 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66789 PF00069 Pkinase 1.80E-72 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00636 - K07198 csv:101211847 717.227