Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00638 | ATGTTGGAGAAAATGATTTCATCACGAGTGACCAATGGTGAATGTATGCCTGAATCAAATCGAAAGAATTCATCCAGCCTTAAATCAACCTCCGTATCCACATTGAAGACATCTGCTTCTGACGGTTTCAACTGGAGGAAGTACGGACAAAAACAAGTAAAGAGTCCGAGAGGTTCTCGAAGCTATTACAGGTGTACTTACTCGGAATGCTATGCTAAAAAAATCGAATGCTGTGACCACTCAGGCCATGTAGCAGAGATTGTTTACAAGAGCCAGCATAATCACGATCCCCCGAGGAAGATTAGCAGCATGAGGAAAAGTAAGCTACCCACATCTGCTGATCATATAGTCAGAGATATAGAAAACAGCAGGATCGTTGAAAGTTCAGATCCATCCACATCTTTTAAGGAACCTGACCAAGACAAATCTGTTTCTGGGTCTGAAAGTAAACAACAGAATTCAATCTGCTACACTAATGGGAATGGTGAAATTATTATCAGAGAGGAAGATGCTTATGAACCGGAACCAAAGCAAAGAGTGAAGAAAAGCAACCTAGAACATTCAGATTCTTTGTTCAAAACAGGGAAGAAACAAAAAATTGTTGTGCACACAGCTGATGTGGGGATTTCAGGCGATGGATACAGATGGCGAAAGTACGGACAGAAAATGGTGAAGGGAAATCCTTACCCCCGAAACTACTACAGATGCACTTCAGCCGGGTGTCCTGTCCGTAAGCACACCGAGACGGATGTTGAAAACACAAGTACTGTAATTATAATCTACAAGGGTGTACATGACCACGGCATGCCCGTGCCGAAGAAACGGCACAGCCCACCGAGTGAACAACTCGTGGCTGCTTCTGCCCCCGCTTCCATGACCACCATGCAAGCCAAGAAAGCTCAAAAATTACACAACCAAATGCCGTCAACGCAACTTTCTGTCGCCGCTGAAGGAGAATTAAATGGCGAGGCATTAGACCTTGGAGGTGAGAAGGCAATGGAATCGGCTCGAACTCTTTTGAGCATGGGATTTGAAATAAAACCGTGTTGA | 1050 | 44.19 | MLEKMISSRVTNGECMPESNRKNSSSLKSTSVSTLKTSASDGFNWRKYGQKQVKSPRGSRSYYRCTYSECYAKKIECCDHSGHVAEIVYKSQHNHDPPRKISSMRKSKLPTSADHIVRDIENSRIVESSDPSTSFKEPDQDKSVSGSESKQQNSICYTNGNGEIIIREEDAYEPEPKQRVKKSNLEHSDSLFKTGKKQKIVVHTADVGISGDGYRWRKYGQKMVKGNPYPRNYYRCTSAGCPVRKHTETDVENTSTVIIIYKGVHDHGMPVPKKRHSPPSEQLVAASAPASMTTMQAKKAQKLHNQMPSTQLSVAAEGELNGEALDLGGEKAMESARTLLSMGFEIKPC | 349 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 11028394 | 11030794 | + | Bma006183.1 | Bma11g00638 | 91040 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00638 | 349 | MobiDBLite | consensus disorder prediction | 12 | 33 | - | - | |
Bma11g00638 | 349 | Gene3D | WRKY domain | 195 | 271 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | Gene3D | WRKY domain | 23 | 99 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | ProSiteProfiles | WRKY domain profile. | 40 | 98 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 4 | 347 | IPR044810 | GO:0003700 | |
Bma11g00638 | 349 | SUPERFAMILY | WRKY DNA-binding domain | 203 | 270 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | PANTHER | WRKY TRANSCRIPTION FACTOR 32-RELATED | 4 | 347 | - | - | |
Bma11g00638 | 349 | MobiDBLite | consensus disorder prediction | 1 | 33 | - | - | |
Bma11g00638 | 349 | MobiDBLite | consensus disorder prediction | 116 | 155 | - | - | |
Bma11g00638 | 349 | SMART | WRKY_cls | 39 | 97 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | SMART | WRKY_cls | 210 | 269 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | Pfam | WRKY DNA -binding domain | 41 | 96 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | Pfam | WRKY DNA -binding domain | 212 | 267 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | ProSiteProfiles | WRKY domain profile. | 205 | 270 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Bma11g00638 | 349 | SUPERFAMILY | WRKY DNA-binding domain | 38 | 98 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma01g00327 | Bma11g00638 | CCT | |
Bma07g00734 | Bma11g00638 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g00327 | Bma-Chr1:2685807 | Bma11g00638 | Bma-Chr11:11028394 | 5.60E-84 | dispersed | |
Bma11g00638 | Bma-Chr11:11028394 | Bma13g00171 | Bma-Chr13:1999694 | 1.40E-15 | dispersed | |
Bma11g00638 | Bma-Chr11:11028394 | Bma07g00734 | Bma-Chr7:19462514 | 0 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58055 | PF03106 | WRKY | 2.10E-22 | CL0274 | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00638 | - | - | zju:107426870 | 447.588 |