Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00638 ATGTTGGAGAAAATGATTTCATCACGAGTGACCAATGGTGAATGTATGCCTGAATCAAATCGAAAGAATTCATCCAGCCTTAAATCAACCTCCGTATCCACATTGAAGACATCTGCTTCTGACGGTTTCAACTGGAGGAAGTACGGACAAAAACAAGTAAAGAGTCCGAGAGGTTCTCGAAGCTATTACAGGTGTACTTACTCGGAATGCTATGCTAAAAAAATCGAATGCTGTGACCACTCAGGCCATGTAGCAGAGATTGTTTACAAGAGCCAGCATAATCACGATCCCCCGAGGAAGATTAGCAGCATGAGGAAAAGTAAGCTACCCACATCTGCTGATCATATAGTCAGAGATATAGAAAACAGCAGGATCGTTGAAAGTTCAGATCCATCCACATCTTTTAAGGAACCTGACCAAGACAAATCTGTTTCTGGGTCTGAAAGTAAACAACAGAATTCAATCTGCTACACTAATGGGAATGGTGAAATTATTATCAGAGAGGAAGATGCTTATGAACCGGAACCAAAGCAAAGAGTGAAGAAAAGCAACCTAGAACATTCAGATTCTTTGTTCAAAACAGGGAAGAAACAAAAAATTGTTGTGCACACAGCTGATGTGGGGATTTCAGGCGATGGATACAGATGGCGAAAGTACGGACAGAAAATGGTGAAGGGAAATCCTTACCCCCGAAACTACTACAGATGCACTTCAGCCGGGTGTCCTGTCCGTAAGCACACCGAGACGGATGTTGAAAACACAAGTACTGTAATTATAATCTACAAGGGTGTACATGACCACGGCATGCCCGTGCCGAAGAAACGGCACAGCCCACCGAGTGAACAACTCGTGGCTGCTTCTGCCCCCGCTTCCATGACCACCATGCAAGCCAAGAAAGCTCAAAAATTACACAACCAAATGCCGTCAACGCAACTTTCTGTCGCCGCTGAAGGAGAATTAAATGGCGAGGCATTAGACCTTGGAGGTGAGAAGGCAATGGAATCGGCTCGAACTCTTTTGAGCATGGGATTTGAAATAAAACCGTGTTGA 1050 44.19 MLEKMISSRVTNGECMPESNRKNSSSLKSTSVSTLKTSASDGFNWRKYGQKQVKSPRGSRSYYRCTYSECYAKKIECCDHSGHVAEIVYKSQHNHDPPRKISSMRKSKLPTSADHIVRDIENSRIVESSDPSTSFKEPDQDKSVSGSESKQQNSICYTNGNGEIIIREEDAYEPEPKQRVKKSNLEHSDSLFKTGKKQKIVVHTADVGISGDGYRWRKYGQKMVKGNPYPRNYYRCTSAGCPVRKHTETDVENTSTVIIIYKGVHDHGMPVPKKRHSPPSEQLVAASAPASMTTMQAKKAQKLHNQMPSTQLSVAAEGELNGEALDLGGEKAMESARTLLSMGFEIKPC 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 11028394 11030794 + Bma006183.1 Bma11g00638 91040
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00638 349 MobiDBLite consensus disorder prediction 12 33 - -
Bma11g00638 349 Gene3D WRKY domain 195 271 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 Gene3D WRKY domain 23 99 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 ProSiteProfiles WRKY domain profile. 40 98 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 4 347 IPR044810 GO:0003700
Bma11g00638 349 SUPERFAMILY WRKY DNA-binding domain 203 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 4 347 - -
Bma11g00638 349 MobiDBLite consensus disorder prediction 1 33 - -
Bma11g00638 349 MobiDBLite consensus disorder prediction 116 155 - -
Bma11g00638 349 SMART WRKY_cls 39 97 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 SMART WRKY_cls 210 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 Pfam WRKY DNA -binding domain 41 96 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 Pfam WRKY DNA -binding domain 212 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 ProSiteProfiles WRKY domain profile. 205 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bma11g00638 349 SUPERFAMILY WRKY DNA-binding domain 38 98 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma01g00327 Bma11g00638 CCT
Bma07g00734 Bma11g00638 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00327 Bma-Chr1:2685807 Bma11g00638 Bma-Chr11:11028394 5.60E-84 dispersed
Bma11g00638 Bma-Chr11:11028394 Bma13g00171 Bma-Chr13:1999694 1.40E-15 dispersed
Bma11g00638 Bma-Chr11:11028394 Bma07g00734 Bma-Chr7:19462514 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58055 PF03106 WRKY 2.10E-22 CL0274 Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00638 - - zju:107426870 447.588