Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00665 ATGGAACTGAAGAAGGAGAAGCTCGTTAGGTTTTATTCAGATCGAAGTAAAAAACAAAGAGAAGCATCGTCGAGAGAAATTGAACTTCTGTATCAGGAACAATCATTGTCGAACAAGGTTTCGTCATCTTCAATCCGGAAGAATGATTACGGGCCTGTGGGACACAAAAATCGATTCACCGAAACTAATCAAACTGGCAAGTTTAAGGTCTTTCCGGGAGATCAAGAGCCATTATGCAAGAGAATATTCGATCCGGGAAGCGAAATTGTCGTGCAATGGAACCAGGTTTTCATCGTCTCCTGCTTGGTGGCACTTTTTGTGGATCCGTTTTATTTTTACTTGCCTACTTTGGGAGGAAATATGAGTTCATCGTGTGTGAAGACTGACAAGAATCTACGAATAGTGGTGACATTATTTCGGACTTTGGCCGACATTTTCTATCTCCTCCATATGGTCATCAAGTTTCGGACTGCATATGTCTCTCCGTCCTCCCGTATTTTTGGAAGAGGTGAACTTGTGATGGACCCGAAGAAGATCGCGTGGAGGTATATTCGATCCGACTTTTTCATCGATCTCATTGCCACTCTGCCTCTTCCTCAGATGGTCATCTGGTCTATCATACCAGCGACGAGAAGCCCTCAAACGGATCATAATAACAACGCTCTTGCCCTCATCGTGCTCTTTCAATACGTTCCGAGATTATATTTAATTTTTCCGTTAAGTTCAGAGATAATTAAAGCAACAGGAGTTGTGACGAAAACAGCATGGGCCGGAGCAGCTTATAACCTGCTGCTCTACATGTTGGCTAGCCATGTATTAGGGGCGGCTTGGTATTTGCTATCTATTGACCGGTACACTTCTTGCTGGAAATCATTCTGCGGAAAGAATGAGTTTAACCGTATAAAATGTCTGCCTACTTACTTGGATTGTGATGTTTTCAATCTCGATGTCCGAAAAATTTGGGCGACTTCCACGACCGTGTTTAAGTACTGCAATCCTGATGTGGGAACTTTCAAGTATGGCATTTTTAAGGATGCATTGTCGAAAGAGGTTGTGTCGACAAACTTTATGAGGAAATATTTCTATTGCTTGTGGTGGGGTTTACAAAACCTGAGTTCGTATGGGCAAAATTTGGATACAAGCACTTTCATCGGAGAGACCTTATTCGCCATTCTCATCGCCATCTTGGGTCTTGTTTTATTTGCTCATCTCATAGGGAATATGCAGACTTATTTGCAATCCATCACGGTTAGGCTAGAGGAATGGCGACTCAAGCGAAGAGACACAGAGGAGTGGATGAGACACCGGCAACTTCCCGAGGATCTGAAACAACGAGTGCGGCGTTTTGTACAATATAAATGGCTCGCCACTCGAGGGGTCGATGAAGAAGCCATATTGCATAGCTTACCAGCTGATCTTCGTCGCGATATTCAGAGACACCTTTGCTTAGACCTCGTTCGACGAGTCCCTTTATTCTCACAAATGGACGATCAGCTGCTAGATGCGATATGCGAGCGGCTAGTATCCTCGCTAAGCACTCAAGGCACTTACATCGTCCGAGAGGGTGATACCGTCACGGAAATGCTTTTTATAATCCGGGGAAGGCTGGAGAGCTGGACAACCAACGGAGGTCGGACCGGTTTCTTCAATTCCATAACTTTACGGCCCGGAGATTTTTGCGGGGAGGAGCTTCTTTCATGGGCCCTACTGCCGAAATTGACCGTCAACTTGCCATCTTCAACTAGGACGGTCAAGGCTCTAAACGAAGTCGAAGCATTTGCACTTCGTGCGGAGGACCTGAAATTTGTGGCTAACCAATTTAGAAGGCTGCATAGCAAGAAATTACAGCATACGTTTCGGTTTTACTCGCACCATTGGAGGACATGGGCGGCCTGTTTTATTCAGGCTGCATGGCGCCGACACAAGAAGCGAATGATGATGAAAAGTCTCTCCATGAAGGAATCTTCGACTTTCTACGAGGAAGAGGAAGTAGACGATGGAAAACAATATGGTGAGGATGACCAAGTTCTCGATGGTTCAAATCCTTCGCAGCCGAAAATGAATATCCATACCACGAAACTTGCTTTGAGATTCGCTGCAAATGCAAGGAGGAACACCCAGAAGACAAACTTAGTGAAGCCTCATGAACCGGTTTTTTCTGACTATGCCGATGAGTGA 2178 45.0 MELKKEKLVRFYSDRSKKQREASSREIELLYQEQSLSNKVSSSSIRKNDYGPVGHKNRFTETNQTGKFKVFPGDQEPLCKRIFDPGSEIVVQWNQVFIVSCLVALFVDPFYFYLPTLGGNMSSSCVKTDKNLRIVVTLFRTLADIFYLLHMVIKFRTAYVSPSSRIFGRGELVMDPKKIAWRYIRSDFFIDLIATLPLPQMVIWSIIPATRSPQTDHNNNALALIVLFQYVPRLYLIFPLSSEIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYLLSIDRYTSCWKSFCGKNEFNRIKCLPTYLDCDVFNLDVRKIWATSTTVFKYCNPDVGTFKYGIFKDALSKEVVSTNFMRKYFYCLWWGLQNLSSYGQNLDTSTFIGETLFAILIAILGLVLFAHLIGNMQTYLQSITVRLEEWRLKRRDTEEWMRHRQLPEDLKQRVRRFVQYKWLATRGVDEEAILHSLPADLRRDIQRHLCLDLVRRVPLFSQMDDQLLDAICERLVSSLSTQGTYIVREGDTVTEMLFIIRGRLESWTTNGGRTGFFNSITLRPGDFCGEELLSWALLPKLTVNLPSSTRTVKALNEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRHKKRMMMKSLSMKESSTFYEEEEVDDGKQYGEDDQVLDGSNPSQPKMNIHTTKLALRFAANARRNTQKTNLVKPHEPVFSDYADE 725
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 12624647 12628714 - Bma006228.1 Bma11g00665 91067
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00665 725 Gene3D Helix hairpin bin 419 482 - -
Bma11g00665 725 Pfam Cyclic nucleotide-binding domain 514 602 IPR000595 -
Bma11g00665 725 Pfam Ion transport protein 93 418 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bma11g00665 725 CDD CAP_ED 491 622 IPR000595 -
Bma11g00665 725 SUPERFAMILY Voltage-gated potassium channels 87 413 - -
Bma11g00665 725 SUPERFAMILY cAMP-binding domain-like 421 613 IPR018490 -
Bma11g00665 725 ProSiteProfiles IQ motif profile. 627 656 IPR000048 GO:0005515
Bma11g00665 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 45 722 - -
Bma11g00665 725 Gene3D Jelly Rolls 489 609 IPR014710 -
Bma11g00665 725 PRINTS EAG/ELK/ERG potassium channel family signature 454 461 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00665 725 PRINTS EAG/ELK/ERG potassium channel family signature 404 413 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00665 725 PRINTS EAG/ELK/ERG potassium channel family signature 268 278 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00665 725 PRINTS EAG/ELK/ERG potassium channel family signature 151 160 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00665 725 PRINTS EAG/ELK/ERG potassium channel family signature 386 397 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bma11g00665 725 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 45 722 - -
Bma11g00665 725 MobiDBLite consensus disorder prediction 705 725 - -
Bma11g00665 725 ProSiteProfiles cAMP/cGMP binding motif profile. 491 565 IPR000595 -
Bma11g00665 725 Gene3D - 96 417 - -
Bma11g00665 725 SMART cnmp_10 491 622 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02496 Bma-Chr1:82671441 Bma11g00665 Bma-Chr11:12624647 0 dispersed
Bma11g00180 Bma-Chr11:1621434 Bma11g00665 Bma-Chr11:12624647 0 dispersed
Bma11g00643 Bma-Chr11:11110782 Bma11g00665 Bma-Chr11:12624647 0 dispersed
Bma11g00665 Bma-Chr11:12624647 Bma13g00522 Bma-Chr13:10439032 0 dispersed
Bma15g00425 Bma-Chr15:4604835 Bma11g00665 Bma-Chr11:12624647 1.13E-154 dispersed
Bma11g00665 Bma-Chr11:12624647 Bma08g00382 Bma-Chr8:8627202 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00665 K05391 - mnt:21395192 1084.71