Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00683 ATGGATCCTCACCCGGAAAAGAAAGAACATATTTTTCGGTCAAAGCTGCCGGACATTTACATTCCTTCGCATCTTAATTTGCATACTTACTGCTTTGAATATGTTTCCAAATTTCGAGACCGTCCTTGCCTGATCGATGGAGTTTCCGACCAGGTTTACACCTACGCCGACGTGCATTTCACCGCCCGAAGAGTGGCCGCTGGCCTTAGTAAATTGGGCATTAAGAAAGGGGACGTTATAATGACGTTGCTTCAGAATAGTCCGCAATTCGTCTACGCCTTTCTTGGCGCATCGTACCTTGGCGCAGCCACCACTACGGCCAATCCCTTCTTTACTGCCGGAGAGATCATAAAGCAAGCAAAGTCGGCGAATGCTAAGCTCATCGTTACTCAGGTGGCCTATGTGGACAAAGTAAAGGATTTCTCCGAAGAAAACAACGTAAAAATCGTGTTTACCGACTCTTCTCCTGCAGAAATCGTAAACTTCTCAGACCTGACATCGGCTGACGAAACGGAAATTCCGGAAGTCGTCATCGACCCGGACGACACGGTCGCGCTCCCGTTTTCATCGGGCACGACGGGGCTTCCAAAAGGCGTCATGCTGACCCACAAATGCATGGTCACCGGCGTCGCTCAACAAGTCGACGGGGAAAATCCTTCGCTGAATTTCAGCAGTTCCGACGTGATTCTGTGTGTTCTTCCATTGTTTCATATCTACTGCCTTAGCTCGATCATGCTGTCCGGCCTACGAGTTGGGGCGGCAATATTGATAATGCAGAGATTCGAGATAAACAGATTGTTTGAACTTGTCGAGAAATATAAAGTGACAGTCGCTCCGTTCGTCCCTCCGATCATCTTGGCTATTGCGAAAAACAATGACACCGAAAATTACGATCTATCATCAGTAAAAGTGGTGATGTCCGGCGCTGCACCTCTGGGGAAGGAGCTTGAAGATGCAGTTAGGTCTAAGCTTCCCAATGCCAAGTTCGGACAGGGGTATGGAATGACAGAGTCTGCGTCAGCCATATCATTGTCTTTGGCTTTTGCCAAACAACCATTCGAGGTGAAACCAGGAGCATGCGGGACCGTCATAAGAAATGCAGAGATGAAGATCATAGACCCTGAAACTGGTGCTTCTCTTCCTAAAAATCACGCCGGAGAGATTTGCATCAGAGGCAACCAGATCATGAAAGGGTATTTGAATGACAAGGAGGCCACAGAGAAAACGATAGACGAGGAAGGATGGCTGCACACTGGTGACGTAGGCTACGTCGATGATGATGATGAGGTCTTCATCGTCGATAGACTGAAGGAAATGATCAAATACAAAGGCTTTCAAGTCGCTCCCGCCGAACTCGAAGCTATGCTCATCGCACACCCTCACATTTCCGACGGAGCAGTCGTTTCCATGAAAGATGAAGCTGCAGGAGAGGTTCCTGTTGCCTTTGTTGTCAGATCCAACGGTTCAAACGTCTCTGAAATTGAAATCAAGAACTATATTTCAAATCAGGTTGTATTTTATAAGAGAATTAACAGGGTGTTCTTCGTAGACTCTATTCCTAAATCTCCTGCTGGCAAGATCTTGCGTAAAGACCTAAGAGCCCGCTTTGCACCCCTTCCAAAGAACTAA 1629 47.33 MDPHPEKKEHIFRSKLPDIYIPSHLNLHTYCFEYVSKFRDRPCLIDGVSDQVYTYADVHFTARRVAAGLSKLGIKKGDVIMTLLQNSPQFVYAFLGASYLGAATTTANPFFTAGEIIKQAKSANAKLIVTQVAYVDKVKDFSEENNVKIVFTDSSPAEIVNFSDLTSADETEIPEVVIDPDDTVALPFSSGTTGLPKGVMLTHKCMVTGVAQQVDGENPSLNFSSSDVILCVLPLFHIYCLSSIMLSGLRVGAAILIMQRFEINRLFELVEKYKVTVAPFVPPIILAIAKNNDTENYDLSSVKVVMSGAAPLGKELEDAVRSKLPNAKFGQGYGMTESASAISLSLAFAKQPFEVKPGACGTVIRNAEMKIIDPETGASLPKNHAGEICIRGNQIMKGYLNDKEATEKTIDEEGWLHTGDVGYVDDDDEVFIVDRLKEMIKYKGFQVAPAELEAMLIAHPHISDGAVVSMKDEAAGEVPVAFVVRSNGSNVSEIEIKNYISNQVVFYKRINRVFFVDSIPKSPAGKILRKDLRARFAPLPKN 542
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 15241638 15244222 - Bma006257.1 Bma11g00683 91085
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00683 542 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 7 536 - -
Bma11g00683 542 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 7 536 - -
Bma11g00683 542 Pfam AMP-binding enzyme 34 442 IPR000873 -
Bma11g00683 542 Gene3D - 3 436 IPR042099 -
Bma11g00683 542 Gene3D - 437 537 IPR045851 -
Bma11g00683 542 ProSitePatterns Putative AMP-binding domain signature. 186 197 IPR020845 -
Bma11g00683 542 SUPERFAMILY Acetyl-CoA synthetase-like 10 539 - -
Bma11g00683 542 CDD 4CL 21 532 - -
Bma11g00683 542 Pfam AMP-binding enzyme C-terminal domain 451 526 IPR025110 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma04g01236 Bma-Chr4:36305446 Bma11g00683 Bma-Chr11:15241638 2.65E-98 dispersed
Bma11g00683 Bma-Chr11:15241638 Bma13g00643 Bma-Chr13:15570133 0 dispersed
Bma11g00683 Bma-Chr11:15241638 Bma14g00445 Bma-Chr14:5144008 1.79E-136 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00683 K01904 - jre:108998879 804.283