Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00703 | ATGGATAATATTGGAGGTGATCTCAATAACTACTGGGATGACGATACCTTTCTAACAGCCGAAGAGATTGACAGCTGGGGATTGGACGAGACTTTATCGAGTAATTATGATTCTAGCTCACCGGATGGTTCTGCGTTGAAAAATGTAGTTTCGGAGAGGAATAGGAGGAAGAAGCTAAACGAAAAACTGTACGCACTCAGAGCTATAGTTCCTAACATTACTAAGATGGACAAGGCGTCGATAATCAAAGACGCCATAGACTACATCCAAGAGCTTCAAGAGCAAGAAAGAATACTCCAAGGGGAAATAGAAGAGTTAGAGAGCGAAACGGTGTTGAAAGACGATGGAGGTTTCGGCTTCAAGAGAGATCTACCGATTCTACTCCGATCAAAGAAAAGGAAGACGGAACAGCTCAGTGATCCTGGAGGATCTGTAACTTCTCCCATTGAAGTCCTTGACCTGACTGTTACATTCATGGGAGAGAAAACAATGGCGGTGAGCTTGACGTGCACGAAGAGCAGGGAAACAATGGTGAAACTGTGTGAGGTGTTTGAAACGATAAAGCTGAAACTCATCTCTGCTAGCATCATTGAGGTGTCTGGAAGAGTTATCAAGACCCTTTTCATTGAGGCAGAGGAAGAAGAGAAAGATGTTATAAAGCTACAAATAGAGACGGCCATTGCAGTTTTCAATAGCCCACAGAGCCAATAA | 711 | 43.32 | MDNIGGDLNNYWDDDTFLTAEEIDSWGLDETLSSNYDSSSPDGSALKNVVSERNRRKKLNEKLYALRAIVPNITKMDKASIIKDAIDYIQELQEQERILQGEIEELESETVLKDDGGFGFKRDLPILLRSKKRKTEQLSDPGGSVTSPIEVLDLTVTFMGEKTMAVSLTCTKSRETMVKLCEVFETIKLKLISASIIEVSGRVIKTLFIEAEEEEKDVIKLQIETAIAVFNSPQSQ | 236 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16745683 | 16747426 | - | Bma006295.1 | Bma11g00703 | 91105 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00703 | 236 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 43 | 92 | IPR011598 | GO:0046983 | |
Bma11g00703 | 236 | Coils | Coil | 89 | 109 | - | - | |
Bma11g00703 | 236 | Coils | Coil | 204 | 224 | - | - | |
Bma11g00703 | 236 | Pfam | Helix-loop-helix DNA-binding domain | 51 | 93 | IPR011598 | GO:0046983 | |
Bma11g00703 | 236 | PANTHER | TRANSCRIPTION FACTOR BHLH35 | 6 | 232 | - | - | |
Bma11g00703 | 236 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 6 | 232 | - | - | |
Bma11g00703 | 236 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 43 | 109 | IPR036638 | GO:0046983 | |
Bma11g00703 | 236 | SMART | finulus | 49 | 98 | IPR011598 | GO:0046983 | |
Bma11g00703 | 236 | Gene3D | - | 41 | 110 | IPR036638 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma06g01028 | Bma11g00703 | CCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma06g01028 | Bma-Chr6:46986271 | Bma11g00703 | Bma-Chr11:16745683 | 5.20E-61 | dispersed | |
Bma07g00170 | Bma-Chr7:2274279 | Bma11g00703 | Bma-Chr11:16745683 | 1.07E-18 | dispersed | |
Bma07g01474 | Bma-Chr7:50374715 | Bma11g00703 | Bma-Chr11:16745683 | 7.83E-18 | dispersed | |
Bma11g00703 | Bma-Chr11:16745683 | Bma14g00153 | Bma-Chr14:2131378 | 3.99E-20 | dispersed | |
Bma14g01796 | Bma-Chr14:38542509 | Bma11g00703 | Bma-Chr11:16745683 | 9.43E-14 | dispersed | |
Bma11g00703 | Bma-Chr11:16745683 | Bma11g00704 | Bma-Chr11:16988076 | 8.79E-110 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58058 | PF00010 | HLH | 1.80E-11 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00703 | - | - | jre:109003087 | 282.722 |