Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00704 | GGCGATTGCAGCTGGGGATTGGACGAAACTTTATCGAGTTATGATGATTCTAGCTCACCGGATGGTTCTGCGTCGAGAAACATAGTTACGGAGAGGAATAGGAGGAAGAAGCTAAACGAAAGACTGTTCGCACTCAGAGCTGTAGTTCCTAACATTACAAAGATGGATAAGGCATCGATAATCAAAGACGCCATAGACTACATCCAAGAGCTTCAAGAGCGAGAAATAACACTCCAAGCGGAAATAGAAGAGTTAGAGAGCGGAACGGTGTTGAAAGACGTTGGAGGGTTTGACTTGGAGCGAGATCTACCAAATTTACTCCGATCAAAGAAAAGGAAGTCGGAACAGCACTGTGATCCTGTAGGATCTGGAACTTCTCCCATTGAAGTCCTCGATCTGAGTGTTACATTCATGGGAGAGAAAACAGTGGTGGTGAGCTTGACGTGCACGAAGAGAACGGAAACAATGGTGAAACTGTGTGAGGTGTTTGAAACGATGAACCTGAAAGTCATCACTGCTAGCATCATTGCGGTGTCTGGAAAACTTACCAAGACCCTTTTCATCGAGGCAGAGGAAGAAGAGAAAGATGTTATAAAGCTACAAATAGAGACGGCCATTGCAGTTCTCAATGGCCCACACAGTCCAATGAGCATCTGA | 657 | 45.21 | GDCSWGLDETLSSYDDSSSPDGSASRNIVTERNRRKKLNERLFALRAVVPNITKMDKASIIKDAIDYIQELQEREITLQAEIEELESGTVLKDVGGFDLERDLPNLLRSKKRKSEQHCDPVGSGTSPIEVLDLSVTFMGEKTVVVSLTCTKRTETMVKLCEVFETMNLKVITASIIAVSGKLTKTLFIEAEEEEKDVIKLQIETAIAVLNGPHSPMSI | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 16988076 | 16990094 | + | Bma006302.1 | Bma11g00704 | 91106 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00704 | 218 | Gene3D | - | 16 | 88 | IPR036638 | GO:0046983 | |
Bma11g00704 | 218 | PANTHER | TRANSCRIPTION FACTOR SCREAM2-RELATED | 3 | 212 | - | - | |
Bma11g00704 | 218 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
Bma11g00704 | 218 | MobiDBLite | consensus disorder prediction | 10 | 27 | - | - | |
Bma11g00704 | 218 | PANTHER | TRANSCRIPTION FACTOR BHLH35 | 3 | 212 | - | - | |
Bma11g00704 | 218 | SMART | finulus | 28 | 77 | IPR011598 | GO:0046983 | |
Bma11g00704 | 218 | Coils | Coil | 68 | 88 | - | - | |
Bma11g00704 | 218 | Pfam | Helix-loop-helix DNA-binding domain | 28 | 72 | IPR011598 | GO:0046983 | |
Bma11g00704 | 218 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 24 | 88 | IPR036638 | GO:0046983 | |
Bma11g00704 | 218 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 22 | 71 | IPR011598 | GO:0046983 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00704 | Bma-Chr11:16988076 | Bma14g00153 | Bma-Chr14:2131378 | 2.30E-19 | dispersed | |
Bma11g00703 | Bma-Chr11:16745683 | Bma11g00704 | Bma-Chr11:16988076 | 8.79E-110 | tandem |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
58059 | PF00010 | HLH | 2.20E-12 | No_clan | Bma | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00704 | - | - | jre:109003087 | 283.493 |