Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bma11g00807 | ATGGAGGATTTCCATGTGGCTGAATACAGACCAACGAAAAATCACGAGCTGGGATTGTTTGCGATATTTGACGGTCACCTTGGGGATCGAGTCCCATCCTTCTTGAAAGAGAACCTCTTCAACAACATTCTTGAAGAGCCAAATTTCTTCAAAGACCAAGAGGAGGCAATCAAGAATGCATATCACTCCACTAATAAGTTTATCTTGGAAAACTCTATGCAATTTGGTCCTGGTGGCTCTACTGCAGTAACTGCCATAGTCATCGACGGCAAAGACTTATGGGTAGCTAACATTGGTGACTCGAGAGCTGTTGTGTGTGAGAGGGGTTCTGCCAATCAACTTTCAGTAGACCATGAGCCACATAATGAACGCCCAAGGATAGAGAAGCATGGGGGCTTCGTGACGACCTTACCTGGAGATGTACCTCGAGTTAATGGACAACTAGCAGTTGCTCGGGCTTTTGGGGATCAAAATCTTAAAGAACATTTAAGTGCAGATCCCGATGTAAGACACGTTCCTATAGACCCCACCATTGAGTTTGTTATTTTGGCAAGTGATGGACTATGGAAGGTTATGAAGAATCAAGAGGCAGTTGATCTGATTAAGCCCATTAAAGATCCTCAAGCAGCAGCTAAGCGATTAGCGAACGAGGCATTGGCAAGAAAAAGCAAAGACGACATATCATGCATTGTGATTCGGTTTGGATAA | 708 | 44.07 | MEDFHVAEYRPTKNHELGLFAIFDGHLGDRVPSFLKENLFNNILEEPNFFKDQEEAIKNAYHSTNKFILENSMQFGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLSVDHEPHNERPRIEKHGGFVTTLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDVRHVPIDPTIEFVILASDGLWKVMKNQEAVDLIKPIKDPQAAAKRLANEALARKSKDDISCIVIRFG | 235 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 11 | 24502658 | 24508703 | - | Bma006450.1 | Bma11g00807 | 91209 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bma11g00807 | 235 | CDD | PP2Cc | 1 | 234 | IPR001932 | - | |
| Bma11g00807 | 235 | Gene3D | - | 1 | 235 | IPR036457 | - | |
| Bma11g00807 | 235 | PANTHER | PROTEIN PHOSPHATASE 2C 44-RELATED | 1 | 235 | - | - | |
| Bma11g00807 | 235 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 234 | IPR001932 | - | |
| Bma11g00807 | 235 | SMART | PP2C_4 | 1 | 232 | IPR001932 | - | |
| Bma11g00807 | 235 | Pfam | Protein phosphatase 2C | 1 | 227 | IPR001932 | - | |
| Bma11g00807 | 235 | SUPERFAMILY | PP2C-like | 1 | 235 | IPR036457 | - | |
| Bma11g00807 | 235 | PANTHER | ALPHABET, ISOFORM E-RELATED | 1 | 235 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Bma01g02182 | Bma-Chr1:78713791 | Bma11g00807 | Bma-Chr11:24502658 | 1.06E-71 | dispersed | |
| Bma11g00807 | Bma-Chr11:24502658 | Bma12g00365 | Bma-Chr12:6487620 | 2.34E-102 | dispersed | |
| Bma05g00955 | Bma-Chr5:47744658 | Bma11g00807 | Bma-Chr11:24502658 | 6.50E-34 | transposed | |
| Bma11g00807 | Bma-Chr11:24502658 | Bma07g00627 | Bma-Chr7:9974271 | 1.02E-156 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Bma11g00807 | K17506 | - | cpap:110811361 | 414.461 |