Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00807 ATGGAGGATTTCCATGTGGCTGAATACAGACCAACGAAAAATCACGAGCTGGGATTGTTTGCGATATTTGACGGTCACCTTGGGGATCGAGTCCCATCCTTCTTGAAAGAGAACCTCTTCAACAACATTCTTGAAGAGCCAAATTTCTTCAAAGACCAAGAGGAGGCAATCAAGAATGCATATCACTCCACTAATAAGTTTATCTTGGAAAACTCTATGCAATTTGGTCCTGGTGGCTCTACTGCAGTAACTGCCATAGTCATCGACGGCAAAGACTTATGGGTAGCTAACATTGGTGACTCGAGAGCTGTTGTGTGTGAGAGGGGTTCTGCCAATCAACTTTCAGTAGACCATGAGCCACATAATGAACGCCCAAGGATAGAGAAGCATGGGGGCTTCGTGACGACCTTACCTGGAGATGTACCTCGAGTTAATGGACAACTAGCAGTTGCTCGGGCTTTTGGGGATCAAAATCTTAAAGAACATTTAAGTGCAGATCCCGATGTAAGACACGTTCCTATAGACCCCACCATTGAGTTTGTTATTTTGGCAAGTGATGGACTATGGAAGGTTATGAAGAATCAAGAGGCAGTTGATCTGATTAAGCCCATTAAAGATCCTCAAGCAGCAGCTAAGCGATTAGCGAACGAGGCATTGGCAAGAAAAAGCAAAGACGACATATCATGCATTGTGATTCGGTTTGGATAA 708 44.07 MEDFHVAEYRPTKNHELGLFAIFDGHLGDRVPSFLKENLFNNILEEPNFFKDQEEAIKNAYHSTNKFILENSMQFGPGGSTAVTAIVIDGKDLWVANIGDSRAVVCERGSANQLSVDHEPHNERPRIEKHGGFVTTLPGDVPRVNGQLAVARAFGDQNLKEHLSADPDVRHVPIDPTIEFVILASDGLWKVMKNQEAVDLIKPIKDPQAAAKRLANEALARKSKDDISCIVIRFG 235
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
11 24502658 24508703 - Bma006450.1 Bma11g00807 91209
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00807 235 CDD PP2Cc 1 234 IPR001932 -
Bma11g00807 235 Gene3D - 1 235 IPR036457 -
Bma11g00807 235 PANTHER PROTEIN PHOSPHATASE 2C 44-RELATED 1 235 - -
Bma11g00807 235 ProSiteProfiles PPM-type phosphatase domain profile. 1 234 IPR001932 -
Bma11g00807 235 SMART PP2C_4 1 232 IPR001932 -
Bma11g00807 235 Pfam Protein phosphatase 2C 1 227 IPR001932 -
Bma11g00807 235 SUPERFAMILY PP2C-like 1 235 IPR036457 -
Bma11g00807 235 PANTHER ALPHABET, ISOFORM E-RELATED 1 235 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g02182 Bma-Chr1:78713791 Bma11g00807 Bma-Chr11:24502658 1.06E-71 dispersed
Bma11g00807 Bma-Chr11:24502658 Bma12g00365 Bma-Chr12:6487620 2.34E-102 dispersed
Bma05g00955 Bma-Chr5:47744658 Bma11g00807 Bma-Chr11:24502658 6.50E-34 transposed
Bma11g00807 Bma-Chr11:24502658 Bma07g00627 Bma-Chr7:9974271 1.02E-156 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00807 K17506 - cpap:110811361 414.461