Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00814 ATGAAGAGACGATCGAGAAAAGTTGGAAAGTATGAAGTTGGGCGAACTGTTGGCGAAGGAACATTCGCCAAGGTTAAGTTTGCACAAAATACAGAGACGGGAGAGAGTGTGGCCGTCAAAGTTATGGCCAAAAGCACCATTCTCAGGCACAGAATGGTCGATCAGATCAAAAGAGAGATATCTATAATGAAGATTGTGAGGCATCCAAATATCGTTAGATTGCACGAGGTGTTGGCGAGTCGGACAAAGATTTATATAATCCTCGAGTTTGTTAGTGGTGGAGAACTATACGATAAAATCGTTCATCGACGAAAACTTCCTGAACACGAGTGTCGAAAATATTTTCAACAGTTAATAGATGCAGTTTCTCATTGTCACAAAAAGGGTGTGTATCACAGGGATCTGAAGCCGGAAAACCTTCTTCTTGATGCTTATGGAAATTTAAAGGTTTCTGATTTTGGACTTAGCGCTTTGCCTCAACAGAGCGTTGGGCTGCTTCACACAACATGTGGAACTCCAAATTATGTTGCACCAGAGGTGCTTGGAGGGCAGGGCTATGATGGTGCAGCGGCTGATGTATGGTCGTGTGGAGTCATCCTTTATGTCCTTATGGCCGGATATCTTCCGTTTTCAGAGTCTGACCTACCAACCCTTTTTAGAAAGATCACTACTGCAGATTTTTCTTGTCCAAGTTTGTTTTCACCTGGTGCAAAGTCATTGATACAGAGAATTCTTACTTCGAATCCTAAAATGCGGATTCAAATAGAAGGAATTCGAAAAGACCCCTGGTTTAGGAAAGACTATATCCCAGTCAAACTAGGGGAAACCGAGGAAGTAAATTTTGATGATGTTCACGCTGTCTTTGATGAAATTGAGGAGCAATATGATGTGGCCGAAAAAGGAGAAACTAACGAGAGTGGTCCGTTAATCATGAATGCATTTGAGATGATTACACTATCTCAAGGGTTGAATCTATCTGCTTTGTTTGATCGACAACAGGATTATGTAAAGCGGCAAACTAGGTTTGTTTCACGCAAACCTGCCAAAGATATAATGTCGACGGTCGAATCAGCAGCAGAATCGATGAGTTTTAAGGTCCACACACGTAATTACAAGACTAGGCTGGAAGGAATATCTGAAAATAGAGCTGGACAATTTGCTGTTGTATTGGAGATTTACGAAGTTGCTCCTTCTCTTTTCATGGTGGATGTTCGTAAGGCTTCTGGCGACACTCTCGAATATCACAGGTTCTACAAAAATTTCTGTGCCAAGCTAGAAAATATAATCTGGAAGCCAACTGAGGGCATTGGAAATAACAATCTGCTAAGAACAGTCTCTTGCTGA 1344 41.67 MKRRSRKVGKYEVGRTVGEGTFAKVKFAQNTETGESVAVKVMAKSTILRHRMVDQIKREISIMKIVRHPNIVRLHEVLASRTKIYIILEFVSGGELYDKIVHRRKLPEHECRKYFQQLIDAVSHCHKKGVYHRDLKPENLLLDAYGNLKVSDFGLSALPQQSVGLLHTTCGTPNYVAPEVLGGQGYDGAAADVWSCGVILYVLMAGYLPFSESDLPTLFRKITTADFSCPSLFSPGAKSLIQRILTSNPKMRIQIEGIRKDPWFRKDYIPVKLGETEEVNFDDVHAVFDEIEEQYDVAEKGETNESGPLIMNAFEMITLSQGLNLSALFDRQQDYVKRQTRFVSRKPAKDIMSTVESAAESMSFKVHTRNYKTRLEGISENRAGQFAVVLEIYEVAPSLFMVDVRKASGDTLEYHRFYKNFCAKLENIIWKPTEGIGNNNLLRTVSC 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25073133 25076736 - Bma006462.1 Bma11g00814 91216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00814 447 Gene3D Kinase associated domain 1, KA1 305 431 - -
Bma11g00814 447 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bma11g00814 447 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
Bma11g00814 447 Pfam NAF domain 308 367 IPR004041 GO:0007165
Bma11g00814 447 CDD CIPK_C 312 427 - -
Bma11g00814 447 ProSitePatterns Protein kinases ATP-binding region signature. 17 40 IPR017441 GO:0005524
Bma11g00814 447 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00814 447 SUPERFAMILY Protein kinase-like (PK-like) 8 279 IPR011009 -
Bma11g00814 447 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00814 447 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 6 441 - -
Bma11g00814 447 PANTHER - 6 441 - -
Bma11g00814 447 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00814 447 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Bma11g00814 447 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00103 Bma-Chr2:933229 Bma11g00814 Bma-Chr11:25073133 0 dispersed
Bma11g00814 Bma-Chr11:25073133 Bma11g00896 Bma-Chr11:34141643 0 dispersed
Bma11g00814 Bma-Chr11:25073133 Bma14g00807 Bma-Chr14:9006692 2.33E-179 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66795 PF00069 Pkinase 1.40E-70 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00814 - - mnt:21385825 746.503