Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00819 ATGAATGACCAGCTCTCGAAGCAGACCTCAATTTTTGGCCTGAGATTGTGGGTCGTTGTTGGGGTTTGTGTTGGAGCTGCATTTGTGCTCTTCCTATTTGTTCTTTCGATTTGGCTGGCCTCGAAACGCTCCAAGAGGAAGATCTGTAAGAAATCCACTATCCCAATTGTTTCAAAGGAAATCCAGGAAATCAGAGTCGGCAATGGCGGATTTTCAAATCAACAGTACCAAGAAAACAAGCCGACTCGAGCCCAAATTCCGGCCGATCACCATCGGGAATCCGATTTATTACCCGTTGTCGAATGGCAATCATTGCTTTCGGTTCGGGAAGACGAAGAACGGCCTAGCGGTTACAACAAAATCCACATTGAAATCGGGAAGGATCATAGAATTTCTTACCCAGAATGCGTTGCTGGTTCTTCATCTTCACACGGTAGCGGAGAAGGTCGATGTGGTACCGATCAAGTTCCTGTGGTGATTCCTGAAGTTTCGCATTTAGGCTGGGGACATTGGTATACTCTCAGAGAGCTTGAAGCTTCAACAAATAGCTTTGCAGACGAGAAGGTAATTGGTGAAGGCGGATATGGAATCGTTTACCATGGCGTGTTGGAGGATGGCACTCAGATTGCCGTAAAAAATTTGCTGAACAACAAGGGACAAGCTGAGAGAGAGTTTAAAGTTGAAGTGGAAGCAATTGGACGAGTTCGACATAAAAATTTAGTTAGATTGCTTGGTTACTGTGCTGAAGGAGCTCATAGGATGCTTGTATATGAGTACATCGACAATGGAAACTTAGAGCAATGGCTTCACGGGGATGTGGGTTCAGTCAGCCCATTAACCTGGGAGATTCGAATGAATATCATCTTAGGAACAGCAAAAGGTTTAGCTTACCTCCACGAGGGATTGGAGCCCAAAGTGGTTCATCGGGACATTAAATCAAGCAATGTTTTACTTGATAAACAGTGGAATCCTAAGGTATCAGACTTCGGCCTTGCCAAGCTCCTTGCCTCGGATCATAGCTATGTTACAACTCGAGTGATGGGGACATTTGGCTATGTAGCTCCTGAATATGCAAGCACGGGTTTGTTGAATGAAAGAAGTGATGTGTATAGTTTTGGAATTCTCATTATGGAGATTATTTCAGGAAGAAACCCTGTTGATTATGGTAGACCCGCAGAGGAGGTGAATTTGGTAGATTGGCTTAAGAGAATGGTTTCGGAACGGAAGCCAGAGGAAGTATTGGATCCAAAGCTCAAGGAAACGCCTACTACAAGGGCGTTAAAACGAGCTCTTCTTGTAGCTTTACGATGCATTGATCCAAATGCGCAAAAGCGGCCAAAAATGGGATATGTGATTCACATGCTCGAGGCGGAAGGGGCTGCCCCAAGAAACGATCAAAAAGGCGGGAGGGAGTCAAGGGCGATAAATTCCATCAGCAAAAATGACGGCGTCAAAGAGGAAGAGTCGAGTGGCGTGAAAACGGCAGGCATGCACGAGTCGTAG 1503 45.51 MNDQLSKQTSIFGLRLWVVVGVCVGAAFVLFLFVLSIWLASKRSKRKICKKSTIPIVSKEIQEIRVGNGGFSNQQYQENKPTRAQIPADHHRESDLLPVVEWQSLLSVREDEERPSGYNKIHIEIGKDHRISYPECVAGSSSSHGSGEGRCGTDQVPVVIPEVSHLGWGHWYTLRELEASTNSFADEKVIGEGGYGIVYHGVLEDGTQIAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCAEGAHRMLVYEYIDNGNLEQWLHGDVGSVSPLTWEIRMNIILGTAKGLAYLHEGLEPKVVHRDIKSSNVLLDKQWNPKVSDFGLAKLLASDHSYVTTRVMGTFGYVAPEYASTGLLNERSDVYSFGILIMEIISGRNPVDYGRPAEEVNLVDWLKRMVSERKPEEVLDPKLKETPTTRALKRALLVALRCIDPNAQKRPKMGYVIHMLEAEGAAPRNDQKGGRESRAINSISKNDGVKEEESSGVKTAGMHES 500
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25499778 25501897 - Bma006471.1 Bma11g00819 91221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00819 500 Gene3D Transferase(Phosphotransferase) domain 1 260 471 - -
Bma11g00819 500 ProSitePatterns Serine/Threonine protein kinases active-site signature. 306 318 IPR008271 GO:0004672|GO:0006468
Bma11g00819 500 ProSitePatterns Protein kinases ATP-binding region signature. 190 212 IPR017441 GO:0005524
Bma11g00819 500 SMART serkin_6 184 455 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00819 500 MobiDBLite consensus disorder prediction 460 500 - -
Bma11g00819 500 Gene3D Phosphorylase Kinase; domain 1 164 259 - -
Bma11g00819 500 SUPERFAMILY Protein kinase-like (PK-like) 165 456 IPR011009 -
Bma11g00819 500 MobiDBLite consensus disorder prediction 480 500 - -
Bma11g00819 500 PANTHER OS01G0323000 PROTEIN 1 490 - -
Bma11g00819 500 PANTHER RECEPTOR-LIKE KINASE PLANT 1 490 - -
Bma11g00819 500 Pfam Protein kinase domain 185 448 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00819 500 CDD STKc_IRAK 190 456 - -
Bma11g00819 500 ProSiteProfiles Protein kinase domain profile. 184 456 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00040 Bma-Chr5:2169428 Bma11g00819 Bma-Chr11:25499778 0 dispersed
Bma05g00240 Bma-Chr5:6529823 Bma11g00819 Bma-Chr11:25499778 3.98E-174 dispersed
Bma11g00819 Bma-Chr11:25499778 Bma15g00105 Bma-Chr15:1126644 2.03E-91 dispersed
Bma11g00819 Bma-Chr11:25499778 Bma15g00184 Bma-Chr15:1925429 4.34E-91 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66796 PF00069 Pkinase 6.60E-46 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00819 - - cmax:111497422 748.429