Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00823 ATGAAGGATAACGAGTATGAGGAAGAGTTCGTCGACTACAAGGAAGAAGAAGACAGCGTCCTCGACTCTGATGGAGCTAAACTCAATGGCGAAATGGGCAAGAAGGGCTATGTTAGGATTCATAGTTCAGGATTTAGAGACTTCCTTTTGAAGCCAGAACTTCTTCGTGCTATTGTGGATTGTGGATTTGAGCATCCTTCTGAAGGCAATTTCCTACTTTTTTCTGCGAGACTAGAGTTTTTATCCACCATTCAACACGAATGTATTCCTCAAGCCATCCTGGGCATGGATGTTATTTGTCAAGCAAAATCTGGAATGGGCAAAACTGCTGTTTTTGTTCTTTCATCTCTGCAACAAATTGATCCTGTACCAGGTCAAGTGTCTGCGCTTGTTTTGTGTCATACAAGGGAGTTGGCATATACTCGTCATGAGTTTGAAAGGTTCAGCACGTACCTGGTTGATCTTAGGGTTGCTATCTTCTACGGTGACGTCAGTATCAAAATTCACAAGGATTTACTAAAGAATGAATGCCCACATATTGTCGTTGGAACACCAGGAAGAATATTGGCACTAGCAAGAGATAAGGATCTTTCTTTAAAGAATGTTAGGCATTTTATCCTGGATGAGTGTGACAAAATGCTTGAGTCCCTTGACATGAAAAGAGATGTTCAGGAAATGTTTAAGATGACTCCTCATGATAAACAAGTAATGATGTTTTCTACCACCCTCAGCAAAGAGATCCGTCCAGTTTATCAAAAGTTTATGCAAGATCCAATGGAAATTTATGTTGACGATGAGGCAAAGTTGACCTTGCATGGTCTTCACTACATCAAATTAATGGAGTCGGAGAAAAATCGCAAGTTGGATGATCTCCTTGATGCATTGGACTTTAATCAAGTCGTTATTTTTGTCAAAAGTTTAAGTAGAGCTGCCGAGCTGGATAAATTGCTTGTGGAGTGTAATTTCCCTTCTGTATGCAAGAGGATTCTTGTTGCCACAGATTTGGTTGGTAGAGGTATTGATATTGAGCGTGCCAACATTGTCATCAACTATGACATGCCAGATTCTGCTGATACTTACCTGCAATTGCATAGGGTTGGGAGGGCGTGTAGGTTTGGTACCAAAGGCCTAGCGATAACATTCGTTTCATCTGCTGTTGATTCTGCTATTCTCAATGATGTAAGGCAATGTTGGTATTCGGACGGTCCCTTTATAATTCACTGGGTGATACTTAAAACTTTTTATTTCATAAAATAG 1257 40.33 MKDNEYEEEFVDYKEEEDSVLDSDGAKLNGEMGKKGYVRIHSSGFRDFLLKPELLRAIVDCGFEHPSEGNFLLFSARLEFLSTIQHECIPQAILGMDVICQAKSGMGKTAVFVLSSLQQIDPVPGQVSALVLCHTRELAYTRHEFERFSTYLVDLRVAIFYGDVSIKIHKDLLKNECPHIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMKRDVQEMFKMTPHDKQVMMFSTTLSKEIRPVYQKFMQDPMEIYVDDEAKLTLHGLHYIKLMESEKNRKLDDLLDALDFNQVVIFVKSLSRAAELDKLLVECNFPSVCKRILVATDLVGRGIDIERANIVINYDMPDSADTYLQLHRVGRACRFGTKGLAITFVSSAVDSAILNDVRQCWYSDGPFIIHWVILKTFYFIK 418
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 25648476 25656312 - Bma006476.1 Bma11g00823 91225

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00823 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 40 264 IPR027417 -
Bma11g00823 418 SMART ultradead3 77 277 IPR014001 -
Bma11g00823 418 Gene3D - 326 400 IPR027417 -
Bma11g00823 418 Gene3D - 38 269 IPR027417 -
Bma11g00823 418 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 26 326 - -
Bma11g00823 418 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 327 397 - -
Bma11g00823 418 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 262 410 IPR001650 -
Bma11g00823 418 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE ISOFORM X1 26 326 - -
Bma11g00823 418 CDD DEADc_DDX39 42 263 - -
Bma11g00823 418 PANTHER DEAD-BOX ATP-DEPENDENT RNA HELICASE 56-LIKE ISOFORM X1 327 397 - -
Bma11g00823 418 SMART helicmild6 286 373 IPR001650 -
Bma11g00823 418 Pfam Helicase conserved C-terminal domain 315 373 IPR001650 -
Bma11g00823 418 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 89 261 IPR014001 -
Bma11g00823 418 Pfam DEAD/DEAH box helicase 83 247 IPR011545 GO:0003676|GO:0005524
Bma11g00823 418 CDD SF2_C_DEAD 275 382 - -
Bma11g00823 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 199 391 IPR027417 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00823 K12812 DDX39B, UAP56, SUB2; ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13] - csv:101217346 628.246
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01278 Bma-Chr1:17309342 Bma11g00823 Bma-Chr11:25648476 2.76E-30 dispersed
Bma01g01279 Bma-Chr1:17310403 Bma11g00823 Bma-Chr11:25648476 0 dispersed
Bma04g00065 Bma-Chr4:587252 Bma11g00823 Bma-Chr11:25648476 6.02E-45 dispersed
Bma11g00823 Bma-Chr11:25648476 Bma02g01063 Bma-Chr2:52225895 8.44E-56 dispersed
Bma11g00823 Bma-Chr11:25648476 Bma02g00027 Bma-Chr2:313407 0 transposed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 8.4e-252 865.9
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 8.4e-252 865.9
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.2 1.2e-250 862.1
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT5G60390 94.4 4.6e-250 860.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.2 6.0e-250 859.8
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 8.4e-252 865.9
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 8.4e-252 865.9
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.2 1.2e-250 862.1
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT1G07920 94.4 4.6e-250 860.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.2 6.0e-250 859.8
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.5 2.1e-200 694.9
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 3.6e-200 694.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.1 6.8e-199 689.9
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT1G07930 79.0 2.0e-198 688.3
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 78.6 2.0e-198 688.3
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 8.4e-252 865.9
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 8.4e-252 865.9
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.2 1.2e-250 862.1
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT1G07940 94.4 4.6e-250 860.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.2 6.0e-250 859.8
Bma06g00403 . 1 720 Eukaryotic Initiation Factors Gene Family AT3G02270 55.7 2.0e-180 629.4
Bma14g01282 . 1 660 Eukaryotic Initiation Factors Gene Family AT3G02270 53.4 7.1e-162 567.8
Bma14g00004 . 14 490 Eukaryotic Initiation Factors Gene Family AT3G02270 59.4 2.1e-121 433.3
Bma10g00536 BCT 1 113 Eukaryotic Initiation Factors Gene Family AT4G27130 91.2 7.5e-56 213.0
Bma13g01033 BCT 10 110 Eukaryotic Initiation Factors Gene Family AT4G27130 91.1 1.5e-48 188.7
Bma07g01330 . 5 116 Eukaryotic Initiation Factors Gene Family AT4G27130 79.6 1.8e-46 181.8
Bma14g00335 BCT 11 122 Eukaryotic Initiation Factors Gene Family AT4G27130 79.6 2.4e-46 181.4
Bma07g01294 BCT 5 116 Eukaryotic Initiation Factors Gene Family AT4G27130 79.6 2.4e-46 181.4
Bma10g00536 BCT 1 113 Eukaryotic Initiation Factors Gene Family AT5G54760 90.3 1.7e-55 211.8
Bma13g01033 BCT 10 110 Eukaryotic Initiation Factors Gene Family AT5G54760 90.1 2.6e-48 188.0
Bma07g01330 . 5 116 Eukaryotic Initiation Factors Gene Family AT5G54760 79.6 1.8e-46 181.8
Bma14g00335 BCT 11 122 Eukaryotic Initiation Factors Gene Family AT5G54760 79.6 2.4e-46 181.4
Bma07g01294 BCT 5 116 Eukaryotic Initiation Factors Gene Family AT5G54760 79.6 2.4e-46 181.4
Bma07g01330 . 5 116 Eukaryotic Initiation Factors Gene Family AT5G54940 83.9 5.0e-52 200.3
Bma14g00335 BCT 11 122 Eukaryotic Initiation Factors Gene Family AT5G54940 83.9 6.5e-52 199.9
Bma07g01294 BCT 5 116 Eukaryotic Initiation Factors Gene Family AT5G54940 83.0 1.9e-51 198.4
Bma10g00536 BCT 1 113 Eukaryotic Initiation Factors Gene Family AT5G54940 74.3 3.2e-43 171.0
Bma13g01033 BCT 3 110 Eukaryotic Initiation Factors Gene Family AT5G54940 72.2 1.4e-38 155.6
Bma10g00536 BCT 1 113 Eukaryotic Initiation Factors Gene Family AT1G54290 89.4 4.8e-55 210.3
Bma13g01033 BCT 10 110 Eukaryotic Initiation Factors Gene Family AT1G54290 91.1 5.2e-49 190.3
Bma07g01330 . 5 116 Eukaryotic Initiation Factors Gene Family AT1G54290 82.3 2.6e-48 188.0
Bma07g01294 BCT 5 116 Eukaryotic Initiation Factors Gene Family AT1G54290 82.3 3.4e-48 187.6
Bma14g00335 BCT 11 122 Eukaryotic Initiation Factors Gene Family AT1G54290 80.5 2.2e-47 184.9
Bma12g00845 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 91.4 8.9e-65 243.0
Bma12g00837 . 1 128 Eukaryotic Initiation Factors Gene Family AT5G35680 91.4 8.9e-65 243.0
Bma08g00659 . 3 130 Eukaryotic Initiation Factors Gene Family AT5G35680 90.6 3.4e-64 241.1
Bma12g00808 . 6 128 Eukaryotic Initiation Factors Gene Family AT5G35680 87.8 5.1e-60 227.3
Bma12g00836 . 1 124 Eukaryotic Initiation Factors Gene Family AT5G35680 83.9 4.9e-55 210.7
Bma12g00845 . 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 3.1e-70 261.2
Bma12g00837 . 1 145 Eukaryotic Initiation Factors Gene Family AT2G04520 88.3 3.1e-70 261.2
Bma08g00659 . 3 147 Eukaryotic Initiation Factors Gene Family AT2G04520 87.6 1.2e-69 259.2
Bma12g00808 . 6 145 Eukaryotic Initiation Factors Gene Family AT2G04520 85.0 1.7e-65 245.4
Bma12g00836 . 1 139 Eukaryotic Initiation Factors Gene Family AT2G04520 79.4 1.3e-57 219.2
Bma03g00233 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 89.8 3.6e-116 414.5
Bma08g01028 . 1 225 Eukaryotic Initiation Factors Gene Family AT2G40290 88.4 6.8e-115 410.2
Bma08g01028 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 82.0 1.9e-158 555.4
Bma03g00233 . 1 344 Eukaryotic Initiation Factors Gene Family AT5G05470 81.7 2.4e-158 555.1
Bma05g00195 . 9 266 Eukaryotic Initiation Factors Gene Family AT5G20920 78.5 3.6e-109 391.3
Bma11g00051 . 12 259 Eukaryotic Initiation Factors Gene Family AT5G20920 78.3 3.9e-103 371.3
Bma11g00051 . 108 248 Eukaryotic Initiation Factors Gene Family AT5G01940 56.3 6.8e-38 154.5
Bma05g00195 . 115 255 Eukaryotic Initiation Factors Gene Family AT5G01940 55.6 3.4e-37 152.1
Bma11g00051 . 112 255 Eukaryotic Initiation Factors Gene Family AT3G07920 70.9 6.3e-56 213.8
Bma05g00195 . 119 262 Eukaryotic Initiation Factors Gene Family AT3G07920 70.3 3.1e-55 211.5
Bma05g01032 . 1 464 Eukaryotic Initiation Factors Gene Family AT1G04170 89.9 8.1e-242 832.8
Bma04g01103 . 1 477 Eukaryotic Initiation Factors Gene Family AT1G04170 87.7 9.3e-238 819.3
Bma05g01032 . 4 464 Eukaryotic Initiation Factors Gene Family AT4G18330 81.1 2.3e-215 745.0
Bma04g01103 . 4 477 Eukaryotic Initiation Factors Gene Family AT4G18330 78.9 3.7e-210 727.6
Bma05g01032 . 91 463 Eukaryotic Initiation Factors Gene Family AT2G18720 74.5 2.0e-161 565.5
Bma04g01103 . 91 476 Eukaryotic Initiation Factors Gene Family AT2G18720 71.5 2.5e-156 548.5
Bma09g00997 . 12 360 Eukaryotic Initiation Factors Gene Family AT1G53880 82.8 2.1e-158 555.4
Bma09g00997 . 4 292 Eukaryotic Initiation Factors Gene Family AT1G72340 81.0 3.3e-125 444.9
Bma07g00574 . 11 173 Eukaryotic Initiation Factors Gene Family AT2G05830 76.7 1.8e-65 246.5
Bma01g00403 . 1 409 Eukaryotic Initiation Factors Gene Family AT3G07300 78.8 6.0e-172 600.5
Bma06g01038 . 1 391 Eukaryotic Initiation Factors Gene Family AT3G07300 79.9 4.6e-164 574.3
Bma09g00660 . 1 655 Eukaryotic Initiation Factors Gene Family AT5G38640 56.5 6.5e-181 630.9
Bma09g00660 . 332 655 Eukaryotic Initiation Factors Gene Family AT2G44070 74.5 2.1e-138 488.8
Bma09g00660 . 1 587 Eukaryotic Initiation Factors Gene Family AT1G48970 53.4 6.6e-154 541.2
Bma06g00403 . 1 720 Eukaryotic Initiation Factors Gene Family AT2G34970 65.7 3.2e-237 818.1
Bma14g01282 . 1 661 Eukaryotic Initiation Factors Gene Family AT2G34970 58.4 4.7e-204 708.0
Bma14g00004 . 15 490 Eukaryotic Initiation Factors Gene Family AT2G34970 68.0 6.7e-158 554.7
Bma06g00403 . 1 720 Eukaryotic Initiation Factors Gene Family AT3G02270 55.7 2.0e-180 629.4
Bma14g01282 . 1 660 Eukaryotic Initiation Factors Gene Family AT3G02270 53.4 7.1e-162 567.8
Bma14g00004 . 14 490 Eukaryotic Initiation Factors Gene Family AT3G02270 59.4 2.1e-121 433.3
Bma06g00403 . 1 720 Eukaryotic Initiation Factors Gene Family AT4G18300 57.8 2.4e-197 685.6
Bma14g01282 . 1 661 Eukaryotic Initiation Factors Gene Family AT4G18300 53.5 1.0e-171 600.5
Bma14g00004 . 15 490 Eukaryotic Initiation Factors Gene Family AT4G18300 62.9 6.6e-134 474.9
Bma08g00120 . 1 1035 Eukaryotic Initiation Factors Gene Family AT1G48410 73.8 0.0e+00 1499.6
Bma02g00821 BCT 110 979 Eukaryotic Initiation Factors Gene Family AT1G48410 76.1 0.0e+00 1343.9
Bma06g01574 BCT 110 956 Eukaryotic Initiation Factors Gene Family AT1G48410 69.2 0.0e+00 1237.6
Bma14g00429 CCT,ECH 787 1537 Eukaryotic Initiation Factors Gene Family AT1G48410 59.7 5.7e-267 917.5
Bma12g01262 . 102 690 Eukaryotic Initiation Factors Gene Family AT1G48410 78.5 1.3e-263 906.4
Bma02g00821 BCT 1 979 Eukaryotic Initiation Factors Gene Family AT5G43810 81.7 0.0e+00 1609.3
Bma06g01574 BCT 1 956 Eukaryotic Initiation Factors Gene Family AT5G43810 74.7 0.0e+00 1504.6
Bma08g00120 . 164 1035 Eukaryotic Initiation Factors Gene Family AT5G43810 73.5 0.0e+00 1324.3
Bma14g00429 CCT,ECH 786 1537 Eukaryotic Initiation Factors Gene Family AT5G43810 59.0 6.7e-262 900.6
Bma12g01262 . 173 690 Eukaryotic Initiation Factors Gene Family AT5G43810 72.6 5.6e-224 774.6
Bma14g01308 . 1 959 Eukaryotic Initiation Factors Gene Family AT4G11420 68.0 0.0e+00 1153.7
Bma01g01260 . 9 705 Eukaryotic Initiation Factors Gene Family AT5G27640 75.8 0.0e+00 1107.0
Bma01g00782 . 12 709 Eukaryotic Initiation Factors Gene Family AT5G27640 74.1 0.0e+00 1085.9
Bma15g00387 . 8 546 Eukaryotic Initiation Factors Gene Family AT5G27640 67.1 4.0e-232 801.2
Bma10g00862 . 1 221 Eukaryotic Initiation Factors Gene Family AT5G27640 51.2 2.9e-81 300.1
Bma01g01260 . 9 705 Eukaryotic Initiation Factors Gene Family AT5G25780 74.4 0.0e+00 1094.0
Bma01g00782 . 1 709 Eukaryotic Initiation Factors Gene Family AT5G25780 72.4 0.0e+00 1077.8
Bma15g00387 . 8 546 Eukaryotic Initiation Factors Gene Family AT5G25780 66.4 3.4e-231 798.1
Bma10g00862 . 1 221 Eukaryotic Initiation Factors Gene Family AT5G25780 51.5 7.7e-82 302.0
Bma07g01098 . 1 671 Eukaryotic Initiation Factors Gene Family AT3G56150 70.8 2.5e-247 852.0
Bma07g01098 . 3 671 Eukaryotic Initiation Factors Gene Family AT3G22860 55.7 1.3e-183 640.2
Bma14g00897 . 5 561 Eukaryotic Initiation Factors Gene Family AT4G20980 78.8 9.3e-259 889.4
Bma14g00897 . 5 567 Eukaryotic Initiation Factors Gene Family AT5G44320 75.9 4.4e-253 870.5
Bma10g00218 . 3 385 Eukaryotic Initiation Factors Gene Family AT3G57290 74.0 7.3e-184 640.2
Bma03g00262 . 2 285 Eukaryotic Initiation Factors Gene Family AT2G39990 77.7 3.8e-128 454.5
Bma11g00103 . 13 306 Eukaryotic Initiation Factors Gene Family AT3G11400 67.5 8.1e-116 413.7
Bma11g00103 . 19 306 Eukaryotic Initiation Factors Gene Family AT5G06000 65.1 1.2e-100 363.2
Bma06g01411 . 84 357 Eukaryotic Initiation Factors Gene Family AT1G10840 75.9 9.2e-115 409.8
Bma14g00858 . 1 247 Eukaryotic Initiation Factors Gene Family AT2G46280 64.3 4.4e-88 321.2
Bma01g01859 . 1 233 Eukaryotic Initiation Factors Gene Family AT2G46280 60.4 9.7e-80 293.5
Bma14g00858 . 1 326 Eukaryotic Initiation Factors Gene Family AT2G46290 78.7 4.9e-154 540.8
Bma01g01859 . 1 312 Eukaryotic Initiation Factors Gene Family AT2G46290 76.6 1.8e-148 522.3
Bma01g00275 . 11 236 Eukaryotic Initiation Factors Gene Family AT4G33250 75.0 7.5e-92 333.6
Bma15g00330 . 1 390 Eukaryotic Initiation Factors Gene Family AT3G13920 91.8 1.1e-205 712.6
Bma02g00533 . 39 426 Eukaryotic Initiation Factors Gene Family AT3G13920 85.8 2.0e-191 665.2
Bma10g00922 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 68.4 1.4e-136 483.0
Bma10g00926 . 38 388 Eukaryotic Initiation Factors Gene Family AT3G13920 68.4 1.4e-136 483.0
Bma09g00970 . 37 203 Eukaryotic Initiation Factors Gene Family AT3G13920 95.2 5.5e-88 321.6
Bma15g00330 . 1 412 Eukaryotic Initiation Factors Gene Family AT1G72730 87.4 1.6e-209 725.3
Bma02g00533 . 40 448 Eukaryotic Initiation Factors Gene Family AT1G72730 83.9 8.4e-198 686.4
Bma10g00922 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 64.6 6.7e-139 490.7
Bma10g00926 . 38 410 Eukaryotic Initiation Factors Gene Family AT1G72730 64.6 6.7e-139 490.7
Bma09g00970 . 37 225 Eukaryotic Initiation Factors Gene Family AT1G72730 93.1 1.8e-99 359.8
Bma10g00922 . 14 410 Eukaryotic Initiation Factors Gene Family AT3G19760 86.6 6.8e-200 693.3
Bma10g00926 . 14 410 Eukaryotic Initiation Factors Gene Family AT3G19760 86.6 6.8e-200 693.3
Bma15g00330 . 36 412 Eukaryotic Initiation Factors Gene Family AT3G19760 64.7 2.1e-140 495.7
Bma02g00533 . 67 448 Eukaryotic Initiation Factors Gene Family AT3G19760 60.9 5.6e-130 461.1
Bma09g00970 . 38 225 Eukaryotic Initiation Factors Gene Family AT3G19760 71.8 3.0e-75 279.3
Bma02g00027 BCT 1 450 Eukaryotic Initiation Factors Gene Family AT5G11200 78.0 1.3e-210 729.2
Bma01g01279 BCT 27 384 Eukaryotic Initiation Factors Gene Family AT5G11200 83.2 1.3e-186 649.4
Bma11g00823 . 2 396 Eukaryotic Initiation Factors Gene Family AT5G11200 70.7 1.4e-169 592.8
Bma01g01279 BCT 41 384 Eukaryotic Initiation Factors Gene Family AT5G11170 92.7 1.2e-184 642.5
Bma02g00027 BCT 110 450 Eukaryotic Initiation Factors Gene Family AT5G11170 92.4 3.1e-182 634.4
Bma11g00823 . 96 396 Eukaryotic Initiation Factors Gene Family AT5G11170 80.9 3.8e-143 504.6
Bma15g00222 BCT 1 512 Eukaryotic Initiation Factors Gene Family AT3G26400 50.5 6.3e-105 378.3
Bma15g00222 BCT 1 512 Eukaryotic Initiation Factors Gene Family AT1G13020 52.4 1.6e-116 416.8
Bma03g00596 BCT 2 368 Eukaryotic Initiation Factors Gene Family AT4G38710 52.9 1.7e-82 303.5
Bma01g01479 BCT 27 231 Eukaryotic Initiation Factors Gene Family AT4G18040 66.0 1.0e-83 306.6
Bma05g01251 . 29 205 Eukaryotic Initiation Factors Gene Family AT4G18040 52.2 1.7e-54 209.5
Bma01g01479 BCT 45 232 Eukaryotic Initiation Factors Gene Family AT1G29590 60.1 1.6e-71 266.2
Bma05g01251 . 28 206 Eukaryotic Initiation Factors Gene Family AT1G29590 52.2 2.5e-53 205.7
Bma01g01479 BCT 45 232 Eukaryotic Initiation Factors Gene Family AT1G29550 59.0 1.3e-70 263.1
Bma05g01251 . 28 206 Eukaryotic Initiation Factors Gene Family AT1G29550 51.7 7.3e-53 204.1
Bma05g01251 . 12 198 Eukaryotic Initiation Factors Gene Family AT5G35620 68.1 2.2e-71 265.4
Bma01g01479 BCT 57 232 Eukaryotic Initiation Factors Gene Family AT5G35620 51.4 3.7e-50 194.9
Bma04g01670 . 190 333 Eukaryotic Initiation Factors Gene Family AT5G18110 90.3 3.3e-76 281.6
Bma04g00098 . 2 780 Eukaryotic Initiation Factors Gene Family AT5G57870 57.7 2.8e-239 825.1
Bma04g00098 . 2 781 Eukaryotic Initiation Factors Gene Family AT2G24050 53.2 8.2e-212 733.8
Bma01g00861 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G77840 63.1 5.1e-145 511.1
Bma02g00261 . 1 447 Eukaryotic Initiation Factors Gene Family AT1G77840 59.9 1.3e-132 469.9
Bma01g00861 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G36730 60.4 3.0e-121 432.2
Bma02g00261 . 1 447 Eukaryotic Initiation Factors Gene Family AT1G36730 65.7 5.3e-118 421.4
Bma01g01263 CCT 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 85.0 3.0e-59 224.6
Bma14g01659 . 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 82.7 1.7e-57 218.8
Bma04g00091 BCT,CCT 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 82.7 4.8e-57 217.2
Bma01g02174 BCT,CCT 1 127 Eukaryotic Initiation Factors Gene Family AT1G26630 81.1 5.3e-56 213.8
Bma15g00140 . 251 365 Eukaryotic Initiation Factors Gene Family AT1G26630 85.2 5.0e-54 207.2
Bma06g00163 . 1 128 Eukaryotic Initiation Factors Gene Family AT1G26630 78.1 1.1e-53 206.1
Bma06g00164 CCT 1 128 Eukaryotic Initiation Factors Gene Family AT1G26630 78.1 1.1e-53 206.1
Bma03g00840 CCT 1 129 Eukaryotic Initiation Factors Gene Family AT1G26630 73.6 5.3e-48 187.2
Bma14g01659 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 87.4 7.4e-78 286.6
Bma01g02174 BCT,CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.9 1.5e-75 278.9
Bma04g00091 BCT,CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G69410 84.3 3.4e-75 277.7
Bma15g00140 . 249 397 Eukaryotic Initiation Factors Gene Family AT1G69410 88.6 1.0e-74 276.2
Bma06g00163 . 1 160 Eukaryotic Initiation Factors Gene Family AT1G69410 81.3 2.7e-72 268.1
Bma06g00164 CCT 1 160 Eukaryotic Initiation Factors Gene Family AT1G69410 81.3 2.7e-72 268.1
Bma01g01263 CCT 1 199 Eukaryotic Initiation Factors Gene Family AT1G69410 68.8 3.3e-70 261.2
Bma03g00840 CCT 1 161 Eukaryotic Initiation Factors Gene Family AT1G69410 78.3 5.9e-67 250.4
Bma14g01659 . 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 90.6 4.3e-78 287.3
Bma04g00091 BCT,CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 2.0e-75 278.5
Bma01g02174 BCT,CCT 1 159 Eukaryotic Initiation Factors Gene Family AT1G13950 87.4 3.4e-75 277.7
Bma01g01263 CCT 1 199 Eukaryotic Initiation Factors Gene Family AT1G13950 73.9 1.3e-74 275.8
Bma15g00140 . 249 397 Eukaryotic Initiation Factors Gene Family AT1G13950 91.3 3.8e-74 274.2
Bma06g00163 . 1 160 Eukaryotic Initiation Factors Gene Family AT1G13950 86.3 6.5e-74 273.5
Bma06g00164 CCT 1 160 Eukaryotic Initiation Factors Gene Family AT1G13950 86.3 6.5e-74 273.5
Bma03g00840 CCT 1 161 Eukaryotic Initiation Factors Gene Family AT1G13950 82.0 9.1e-68 253.1
Bma04g00364 . 98 1079 Eukaryotic Initiation Factors Gene Family AT1G76810 57.7 6.3e-284 974.2
Bma01g02502 . 313 1377 Eukaryotic Initiation Factors Gene Family AT1G76810 59.4 2.2e-276 949.1
Bma04g00364 . 169 1079 Eukaryotic Initiation Factors Gene Family AT1G21160 52.9 6.0e-227 784.6
Bma06g00495 BCT 5 245 Eukaryotic Initiation Factors Gene Family AT3G55620 90.0 1.3e-126 449.1
Bma03g01017 BCT 1 277 Eukaryotic Initiation Factors Gene Family AT3G55620 78.3 3.4e-122 434.5
Bma06g00495 BCT 5 245 Eukaryotic Initiation Factors Gene Family AT2G39820 67.5 1.3e-92 336.3
Bma03g01017 BCT 1 277 Eukaryotic Initiation Factors Gene Family AT2G39820 59.9 2.9e-89 325.1
Bma03g00511 . 30 645 Eukaryotic Initiation Factors Gene Family AT2G23350 60.6 3.4e-201 698.4
Bma01g00658 . 2 654 Eukaryotic Initiation Factors Gene Family AT2G23350 58.4 1.1e-199 693.3
Bma08g00805 BCT,CCT 1 628 Eukaryotic Initiation Factors Gene Family AT2G23350 59.3 1.2e-198 689.9
Bma01g02525 . 27 644 Eukaryotic Initiation Factors Gene Family AT2G23350 50.7 5.2e-149 525.0
Bma10g00064 BCT 13 214 Eukaryotic Initiation Factors Gene Family AT2G23350 51.5 1.9e-50 197.6
Bma03g00511 . 25 642 Eukaryotic Initiation Factors Gene Family AT4G34110 69.9 6.4e-242 833.6
Bma08g00805 BCT,CCT 25 638 Eukaryotic Initiation Factors Gene Family AT4G34110 70.5 1.9e-241 832.0
Bma01g00658 . 2 651 Eukaryotic Initiation Factors Gene Family AT4G34110 67.7 3.9e-239 824.3
Bma01g02525 . 2 643 Eukaryotic Initiation Factors Gene Family AT4G34110 54.6 9.8e-174 607.1
Bma10g00064 BCT 15 201 Eukaryotic Initiation Factors Gene Family AT4G34110 55.6 5.0e-53 206.1
Bma01g02525 . 6 632 Eukaryotic Initiation Factors Gene Family AT1G22760 57.3 5.6e-188 654.4
Bma08g00805 BCT,CCT 29 624 Eukaryotic Initiation Factors Gene Family AT1G22760 54.7 3.3e-164 575.5
Bma01g00658 . 37 631 Eukaryotic Initiation Factors Gene Family AT1G22760 53.4 5.9e-161 564.7
Bma03g00511 . 29 622 Eukaryotic Initiation Factors Gene Family AT1G22760 54.0 1.3e-160 563.5
Bma01g02525 . 13 643 Eukaryotic Initiation Factors Gene Family AT1G71770 56.2 9.0e-189 657.1
Bma03g00511 . 29 640 Eukaryotic Initiation Factors Gene Family AT1G71770 53.1 2.4e-165 579.3
Bma01g00658 . 37 649 Eukaryotic Initiation Factors Gene Family AT1G71770 53.3 5.8e-164 574.7
Bma08g00805 BCT,CCT 29 636 Eukaryotic Initiation Factors Gene Family AT1G71770 53.3 1.0e-163 573.9
Bma03g00511 . 28 645 Eukaryotic Initiation Factors Gene Family AT1G49760 70.8 1.7e-248 855.5
Bma08g00805 BCT,CCT 28 642 Eukaryotic Initiation Factors Gene Family AT1G49760 69.8 1.3e-243 839.3
Bma01g00658 . 2 655 Eukaryotic Initiation Factors Gene Family AT1G49760 65.4 4.6e-238 820.8
Bma01g02525 . 27 644 Eukaryotic Initiation Factors Gene Family AT1G49760 56.0 1.7e-171 599.7
Bma04g01610 BCT 13 599 Eukaryotic Initiation Factors Gene Family AT2G36660 50.8 1.5e-150 530.0
Bma01g02525 . 84 398 Eukaryotic Initiation Factors Gene Family AT1G34140 56.3 1.2e-92 337.0
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.7 8.4e-252 865.9
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.9 8.4e-252 865.9
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.2 1.2e-250 862.1
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT1G07920 94.4 4.6e-250 860.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07920 94.2 6.0e-250 859.8
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.5 2.1e-200 694.9
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.3 3.6e-200 694.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 79.1 6.8e-199 689.9
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT1G07930 79.0 2.0e-198 688.3
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07930 78.6 2.0e-198 688.3
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.7 8.4e-252 865.9
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.9 8.4e-252 865.9
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.2 1.2e-250 862.1
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT1G07940 94.4 4.6e-250 860.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT1G07940 94.2 6.0e-250 859.8
Bma11g00158 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.7 8.4e-252 865.9
Bma05g01293 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.9 8.4e-252 865.9
Bma03g00087 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.2 1.2e-250 862.1
Bma11g00157 . 468 914 Eukaryotic Initiation Factors Gene Family AT5G60390 94.4 4.6e-250 860.1
Bma08g01145 . 1 449 Eukaryotic Initiation Factors Gene Family AT5G60390 94.2 6.0e-250 859.8
Bma14g00801 . 4 228 Eukaryotic Initiation Factors Gene Family AT5G12110 64.6 1.5e-68 256.1
Bma14g00801 . 4 228 Eukaryotic Initiation Factors Gene Family AT5G19510 71.1 1.1e-71 266.5
Bma03g01258 . 1 243 Eukaryotic Initiation Factors Gene Family AT5G19510 59.3 1.1e-47 186.8
Bma03g01258 . 5 245 Eukaryotic Initiation Factors Gene Family AT1G30230 79.3 2.5e-75 278.9
Bma14g00801 . 3 228 Eukaryotic Initiation Factors Gene Family AT1G30230 62.8 3.2e-54 208.8
Bma03g01258 . 5 243 Eukaryotic Initiation Factors Gene Family AT2G18110 79.5 1.7e-75 279.3
Bma14g00801 . 3 228 Eukaryotic Initiation Factors Gene Family AT2G18110 61.9 8.3e-54 207.2
Bma12g00028 BCT 1 138 Eukaryotic Initiation Factors Gene Family AT1G09640 59.2 2.7e-48 189.1
Bma05g00920 . 37 461 Eukaryotic Initiation Factors Gene Family AT1G57720 72.9 3.5e-172 601.3
Bma12g00028 BCT 1 297 Eukaryotic Initiation Factors Gene Family AT1G57720 63.1 9.5e-101 364.0
Bma08g00521 . 1 832 Eukaryotic Initiation Factors Gene Family AT1G56070 93.5 0.0e+00 1577.0
Bma08g00520 . 1 832 Eukaryotic Initiation Factors Gene Family AT1G56070 93.5 0.0e+00 1576.6
Bma12g00676 . 3 846 Eukaryotic Initiation Factors Gene Family AT1G56070 84.4 0.0e+00 1466.8
Bma14g00797 . 1 978 Eukaryotic Initiation Factors Gene Family AT3G22980 70.3 0.0e+00 1343.9
Bma14g00378 . 1 435 Eukaryotic Initiation Factors Gene Family AT5G47880 87.6 2.2e-220 761.5
Bma08g00907 . 6 242 Eukaryotic Initiation Factors Gene Family AT5G47880 72.6 4.2e-99 358.6
Bma14g00378 . 6 437 Eukaryotic Initiation Factors Gene Family AT1G12920 91.4 1.1e-229 792.3
Bma08g00907 . 6 242 Eukaryotic Initiation Factors Gene Family AT1G12920 73.4 9.3e-99 357.5
Bma14g00378 . 1 437 Eukaryotic Initiation Factors Gene Family AT3G26618 91.5 5.5e-232 800.0
Bma08g00907 . 11 242 Eukaryotic Initiation Factors Gene Family AT3G26618 74.6 1.1e-99 360.5
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002942 4 2 5 3 4 1 2 1 1 1 1 1 2 1 1 2 1 5 2 1 1 1 1 1 1 1 1 2 2 2 54
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma11g00823 Bma_Chr11 FPKM 13.420613 14.776088 14.622373 14.369268 55.537357 52.063923 55.870987 15.020839 14.151477 14.678046