Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00874 ATGGATTATATTTATCTTCACTCTCTGCTGCTCGTATTCCTTCTTTCCATTCTTTTCTTCTTCGTCGTCTTCTACAAGCACAGATCTCGTCAATTTTCCGGCATAAATGCTCCTCCGGGAAGCATGGGGTACCCTGTAATCGGAGAGAGCTTGGCCTTCTTGTCCGCCGGCTGGAGAGGTCATCCTGAAAAGTTTGTGCTGGACAGGATGAACAAGCTCGGGTCTGCCATTTTCAAGACCTCCATTATAGGTGTTAAAACGGTTGTTTTTTGTGGGCCTTCTTGCAACAAGTTCTTGTTTTCTAATGAGAACAAGCTGGTGGTTGCATGGTGGCCTGACGCTGTCTACAAGATCTTCCCTTCCACTGGTCAGACGTCCTCCATTGAAGAAGCTTGGAAGCTTAAAAAGCTTCTCCCTCAGTTTCTCAACCCTCAAGCTCTTCGAGGATACGTTGAAGTCATGGACTCCATAGCTGATAAACATTTTTCTTCCTTCTGGGAGAACAAGGATGAAGTTGTCGTCTGCCCACTCACAAAGAATTACACCTTTTCGCTGGCTTGCCGGTTGTTCGTTGGCTTTGAGGAGCCAGAAAACCTCTCAAAACTTTCCGACCCATTCAACGTGCTGGCACGTGGAATCTTTTCATTTCCGATCAACTTTCCGGGCACAGCATTCAACCGAGCGATCAAGGCATCAGAGGAAATAAGGAAGGAGCTGAAAGTCATTATCTGGAAGAGAAAGGTGGATCTTGCAGAGGGAGTGGCATCGCCAACACAAGACATACTTTCTCACATGCTTGTCGCTTGCGATGAGAAGGGTCAGTTCATGAATGAGTCTGAAATTGCAGACAAGATTCTCGTGATGTTGCTCGGCGGCCACGACACAGCCAGTTCTGTCTGTACCTCTATCGTCAAATTTCTTGCTCATTTTCCTCAAGTATACGACTCCGTCTACCAAGAACAAATGGAGATAGCAAAATCAAAAGGTGAGGGAGAATCGTTGAACTGGAAAGACATTCAGAAGATGAGGTATTCATGGAACGTAGCCTGTGAAGCCATGAGACTTGCACCTCCACTTCAAGGAGCTTTCAGACAAGTCATTCAAGACTTCTCCTTTAATGGATTTTCTATTCCAAAAAACTGGAAGGTTTATTGGAGTGCAAACTCGACCCATCAAAATCCCGATTACTTTGCGGATCCGTACAAATTCGACCCGACAAGATTTGACGGCGAGGGCCCTGCTCCCTTCACGTTTGTTCCGTTCGGAGGGGGGCCGCGGATGTGTCCGGGAAGGGAGTATGCTCGGCTGGAAATACTAGTTTTCATGCACCATCTGGTGAAGAGGTTCAGATGGGAAATGGTGATTCCGGGGGAGAAGATGACCTTCAATCCAATGCCCACGCCTTCCAAGGGTCTTCCCATTCGCTTACTTTCTCCCAAAATAACTACATGA 1452 46.9 MDYIYLHSLLLVFLLSILFFFVVFYKHRSRQFSGINAPPGSMGYPVIGESLAFLSAGWRGHPEKFVLDRMNKLGSAIFKTSIIGVKTVVFCGPSCNKFLFSNENKLVVAWWPDAVYKIFPSTGQTSSIEEAWKLKKLLPQFLNPQALRGYVEVMDSIADKHFSSFWENKDEVVVCPLTKNYTFSLACRLFVGFEEPENLSKLSDPFNVLARGIFSFPINFPGTAFNRAIKASEEIRKELKVIIWKRKVDLAEGVASPTQDILSHMLVACDEKGQFMNESEIADKILVMLLGGHDTASSVCTSIVKFLAHFPQVYDSVYQEQMEIAKSKGEGESLNWKDIQKMRYSWNVACEAMRLAPPLQGAFRQVIQDFSFNGFSIPKNWKVYWSANSTHQNPDYFADPYKFDPTRFDGEGPAPFTFVPFGGGPRMCPGREYARLEILVFMHHLVKRFRWEMVIPGEKMTFNPMPTPSKGLPIRLLSPKITT 483
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 32613453 32615851 + Bma006593.1 Bma11g00874 91276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00874 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 421 430 IPR017972 GO:0005506|GO:0016705
Bma11g00874 483 PANTHER CYTOCHROME P450 26 10 477 - -
Bma11g00874 483 PANTHER BETA-AMYRIN 28-OXIDASE-LIKE 10 477 - -
Bma11g00874 483 Gene3D Cytochrome P450 27 478 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS E-class P450 group I signature 386 410 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS E-class P450 group I signature 418 428 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS E-class P450 group I signature 428 451 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 SUPERFAMILY Cytochrome P450 30 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 Pfam Cytochrome P450 38 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS P450 superfamily signature 419 428 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma11g00874 483 PRINTS P450 superfamily signature 428 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01226 Bma-Chr2:54286901 Bma11g00874 Bma-Chr11:32613453 1.61E-28 dispersed
Bma03g01332 Bma-Chr3:27156961 Bma11g00874 Bma-Chr11:32613453 5.89E-12 dispersed
Bma07g00666 Bma-Chr7:11464342 Bma11g00874 Bma-Chr11:32613453 0 dispersed
Bma07g01302 Bma-Chr7:48606310 Bma11g00874 Bma-Chr11:32613453 5.42E-112 dispersed
Bma07g01303 Bma-Chr7:48608795 Bma11g00874 Bma-Chr11:32613453 6.09E-107 dispersed
Bma11g00788 Bma-Chr11:22577406 Bma11g00874 Bma-Chr11:32613453 0 dispersed
Bma11g00874 Bma-Chr11:32613453 Bma07g01215 Bma-Chr7:46958253 1.39E-70 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00874 K20667 - jre:108989520 687.567