Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00895 ATGGCCGCCACTACGACCACAGCCGCAGCTTCCTCCTTCATTGGAACCCGCTTGCCAGAGGTGAACTCAAACTCAGGGAGAGTCCAAGCCCGGTTCGGATTCGGAAAGAAAGGCCCGGCAAAGAAAGTAAAGAAGCCTAGTTTTGATCGTCCTCTCTGGTATCCAGGAGCAAAAGCACCAGAATGGCTCGACGGAAGCTTAGTCGGAGATTATGGGTTCGATCCGTTTGGTCTGGGAAAACCTGCCGAGTACTTGCAGTTTGATTTGGACTCTCTGGATCAGAACCTTTCTAAGAACAAGGCCGGAGACGTAATCGGAACCAGATTTGAGACCGGCGATGTGAAGTCGACTCCTTTCCAACCATACACTGAGGTTTTTGGGTTGCAAAGATTCCGTGAGTGTGAACTCATCCATGGAAGGTGGGCTATGTTGGCCACGCTCGGTGCCATTACTGTTGAGTGGCTTACCGGAGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTAGTGGATGGATCATCATATCTGGGCCAACCCCTTCCGTTCTCCATTTCCACATTGATATGGATCGAAGTTTTGGTGATTGGATACATCGAATTCCAGAGAAATGCAGAGCTTGACCCGGAGAGGAGGCTGTACCCCGGGGGAAAATACTTCGATCCATTAGGCTTAGCCGCCGATCCAGAGAAGAAGGCGACGCTGCAGTTGGCTGAAATCAAGCACGCTCGCCTAGCAATGATTGGTTTCCTAGGGTTTGCCGTTCAAGCTGCAGCCACAGGTAAAGGTCCTCTCAACAACTGGGTCACCCATTTAAGCGATCCTCTCCACACCACCATCATCGACACTTTTACCTCCTAA 855 51.23 MAATTTTAAASSFIGTRLPEVNSNSGRVQARFGFGKKGPAKKVKKPSFDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLSKNKAGDVIGTRFETGDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPERRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMIGFLGFAVQAAATGKGPLNNWVTHLSDPLHTTIIDTFTS 284
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34032587 34033559 - Bma006626.1 Bma11g00895 91297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00895 284 Pfam Chlorophyll A-B binding protein 59 255 IPR022796 -
Bma11g00895 284 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC 1 281 - -
Bma11g00895 284 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 281 IPR001344 GO:0009765|GO:0016020
Bma11g00895 284 SUPERFAMILY Chlorophyll a-b binding protein 46 283 - -
Bma11g00895 284 Gene3D Chlorophyll a/b binding protein domain 53 284 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01766 Bma-Chr1:59401137 Bma11g00895 Bma-Chr11:34032587 2.30E-30 dispersed
Bma10g00329 Bma-Chr10:3027897 Bma11g00895 Bma-Chr11:34032587 6.76E-179 dispersed
Bma11g00895 Bma-Chr11:34032587 Bma14g01033 Bma-Chr14:12102495 9.06E-180 dispersed
Bma11g00895 Bma-Chr11:34032587 Bma03g00334 Bma-Chr3:2489126 4.72E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00895 K08915 - pvy:116111846 506.138