Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00895 | ATGGCCGCCACTACGACCACAGCCGCAGCTTCCTCCTTCATTGGAACCCGCTTGCCAGAGGTGAACTCAAACTCAGGGAGAGTCCAAGCCCGGTTCGGATTCGGAAAGAAAGGCCCGGCAAAGAAAGTAAAGAAGCCTAGTTTTGATCGTCCTCTCTGGTATCCAGGAGCAAAAGCACCAGAATGGCTCGACGGAAGCTTAGTCGGAGATTATGGGTTCGATCCGTTTGGTCTGGGAAAACCTGCCGAGTACTTGCAGTTTGATTTGGACTCTCTGGATCAGAACCTTTCTAAGAACAAGGCCGGAGACGTAATCGGAACCAGATTTGAGACCGGCGATGTGAAGTCGACTCCTTTCCAACCATACACTGAGGTTTTTGGGTTGCAAAGATTCCGTGAGTGTGAACTCATCCATGGAAGGTGGGCTATGTTGGCCACGCTCGGTGCCATTACTGTTGAGTGGCTTACCGGAGTTACCTGGCAAGACGCCGGAAAGGTAGAGCTAGTGGATGGATCATCATATCTGGGCCAACCCCTTCCGTTCTCCATTTCCACATTGATATGGATCGAAGTTTTGGTGATTGGATACATCGAATTCCAGAGAAATGCAGAGCTTGACCCGGAGAGGAGGCTGTACCCCGGGGGAAAATACTTCGATCCATTAGGCTTAGCCGCCGATCCAGAGAAGAAGGCGACGCTGCAGTTGGCTGAAATCAAGCACGCTCGCCTAGCAATGATTGGTTTCCTAGGGTTTGCCGTTCAAGCTGCAGCCACAGGTAAAGGTCCTCTCAACAACTGGGTCACCCATTTAAGCGATCCTCTCCACACCACCATCATCGACACTTTTACCTCCTAA | 855 | 51.23 | MAATTTTAAASSFIGTRLPEVNSNSGRVQARFGFGKKGPAKKVKKPSFDRPLWYPGAKAPEWLDGSLVGDYGFDPFGLGKPAEYLQFDLDSLDQNLSKNKAGDVIGTRFETGDVKSTPFQPYTEVFGLQRFRECELIHGRWAMLATLGAITVEWLTGVTWQDAGKVELVDGSSYLGQPLPFSISTLIWIEVLVIGYIEFQRNAELDPERRLYPGGKYFDPLGLAADPEKKATLQLAEIKHARLAMIGFLGFAVQAAATGKGPLNNWVTHLSDPLHTTIIDTFTS | 284 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 34032587 | 34033559 | - | Bma006626.1 | Bma11g00895 | 91297 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00895 | 284 | Pfam | Chlorophyll A-B binding protein | 59 | 255 | IPR022796 | - | |
Bma11g00895 | 284 | PANTHER | CHLOROPHYLL A-B BINDING PROTEIN CP29.2, CHLOROPLASTIC | 1 | 281 | - | - | |
Bma11g00895 | 284 | PANTHER | CHLOROPHYLL A/B BINDING PROTEIN | 1 | 281 | IPR001344 | GO:0009765|GO:0016020 | |
Bma11g00895 | 284 | SUPERFAMILY | Chlorophyll a-b binding protein | 46 | 283 | - | - | |
Bma11g00895 | 284 | Gene3D | Chlorophyll a/b binding protein domain | 53 | 284 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01766 | Bma-Chr1:59401137 | Bma11g00895 | Bma-Chr11:34032587 | 2.30E-30 | dispersed | |
Bma10g00329 | Bma-Chr10:3027897 | Bma11g00895 | Bma-Chr11:34032587 | 6.76E-179 | dispersed | |
Bma11g00895 | Bma-Chr11:34032587 | Bma14g01033 | Bma-Chr14:12102495 | 9.06E-180 | dispersed | |
Bma11g00895 | Bma-Chr11:34032587 | Bma03g00334 | Bma-Chr3:2489126 | 4.72E-46 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00895 | K08915 | - | pvy:116111846 | 506.138 |