Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00896 | ATGTCTTCGAAATCTGGAAGTAGCGGCCGAACGAGAGTCGGGAAGTATGAGCTGGGTCGCACTCTGGGCGAGGGTAATTTCGCAAAGGTGAAATTCGCTCGGAACATAGAGACCGGCGATAATGCCGCTATCAAAATCCTTGATAAGGAGAAAATTCTCAAGCACAAGATGATAGGCCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTGATGGCTAGCAGGACCAAGATTTACATTGTCATGGAATTTGTTACTGGTGGAGAATTGTTTGACAAAATTGCCAGTAAAGGGAAATTAAAAGAAGATGAGGCAAGAAAGTACTTCCAGCAGCTTATTAATGCTGTGGATTATTGTCATAGCAGAGGTGTTTTTCATCGTGACTTAAAGCCTGAAAATTTGCTGCTAGATTCTAATGGAGTTCTTAAAGTTTCTGATTTTGGGTTGAGTGCTCTACCTCAGCAAGTTCGAGAAGACGGTCTGCTCCACACAACCTGTGGCACACCAAATTATGTTGCGCCTGAGGTAATCAATAACAAAGGCTATGACGGAGTACTAGCAGATTTGTGGTCATGTGGTGTGATTCTTTTTGTCCTAATGGCTGGTTATTTGCCCTTTGAAGATTCCAACCTTGCAGTATTGTATAAAAAGATACATAAGGCTGAGTTCACTTGTCCATCATGGTTTTCGACGAGTGGAAAAAAGTTAATAAAGCGGATTCTGGATCCCAACCCCTCAACTCGAATTACCATTGCTGAGGTTATTGAGAATGAATGGTTTAAGAAAGGATATAAGCCACCCATTTATGAACAAGCTGACGTTACTCTTGATGATGTTGATGCTATCTTCAATGAATCCGGAGATACATGTAACCTTGTTGTAGAGAAGAGAGAAGACGGCTCTGTGGCTCCTGTCACCATGAATGCTTTTGAGCTTATCTCTACGTCTCAGGGCCTCAACCTTGGCTCACTTTTTGAAAAGCAAATGGGACTTGCCAAACGTGAAACAAGGTTCACATCCAATTGTCCTGCTAATGTGATCATTTCCAAGATTGAGGAAGCGGCAACTCCCTTGGGATTTGATGTGAAGAAAAATAACTTCAAGTTGAAACTTCAAGGAGGAAAAACTGGTCGTAAAGGTCATTTATCAGTTGCCACCGAGATTTATGAGGTTGCCCCTTCACTTTACATGGTCGAAGTTCGCAAAGCTGGAGGAGACACTTTAGAATTTCACAAGTTCTATAAGAACCTCTCCACTGGGCTGAAAGATATAGTATGGAAAACTGATGGTAGCATAGAGGAAGAAATTGGTGGCGCTGGTGTTGTACAATCTGGGTAA | 1371 | 41.79 | MSSKSGSSGRTRVGKYELGRTLGEGNFAKVKFARNIETGDNAAIKILDKEKILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASRTKIYIVMEFVTGGELFDKIASKGKLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGVLADLWSCGVILFVLMAGYLPFEDSNLAVLYKKIHKAEFTCPSWFSTSGKKLIKRILDPNPSTRITIAEVIENEWFKKGYKPPIYEQADVTLDDVDAIFNESGDTCNLVVEKREDGSVAPVTMNAFELISTSQGLNLGSLFEKQMGLAKRETRFTSNCPANVIISKIEEAATPLGFDVKKNNFKLKLQGGKTGRKGHLSVATEIYEVAPSLYMVEVRKAGGDTLEFHKFYKNLSTGLKDIVWKTDGSIEEEIGGAGVVQSG | 456 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 34141643 | 34154773 | - | Bma006627.1 | Bma11g00896 | 91298 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00896 | 456 | ProSitePatterns | Protein kinases ATP-binding region signature. | 22 | 45 | IPR017441 | GO:0005524 | |
Bma11g00896 | 456 | Gene3D | Kinase associated domain 1, KA1 | 313 | 438 | - | - | |
Bma11g00896 | 456 | CDD | STKc_SnRK3 | 15 | 270 | - | - | |
Bma11g00896 | 456 | SUPERFAMILY | Protein kinase-like (PK-like) | 13 | 282 | IPR011009 | - | |
Bma11g00896 | 456 | CDD | CIPK_C | 319 | 434 | - | - | |
Bma11g00896 | 456 | PANTHER | SERINE/THREONINE KINASE | 10 | 443 | - | - | |
Bma11g00896 | 456 | ProSiteProfiles | Protein kinase domain profile. | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00896 | 456 | Pfam | NAF domain | 315 | 375 | IPR004041 | GO:0007165 | |
Bma11g00896 | 456 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 135 | 147 | IPR008271 | GO:0004672|GO:0006468 | |
Bma11g00896 | 456 | Gene3D | Transferase(Phosphotransferase) domain 1 | 96 | 278 | - | - | |
Bma11g00896 | 456 | SMART | serkin_6 | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma11g00896 | 456 | Gene3D | Phosphorylase Kinase; domain 1 | 5 | 95 | - | - | |
Bma11g00896 | 456 | PANTHER | NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE | 10 | 443 | - | - | |
Bma11g00896 | 456 | ProSiteProfiles | NAF domain profile. | 313 | 337 | IPR018451 | GO:0007165 | |
Bma11g00896 | 456 | Pfam | Protein kinase domain | 16 | 271 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma11g00896 | Bma14g00807 | CCT | |
Bma07g00769 | Bma11g00896 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma01g01053 | Bma-Chr1:11050491 | Bma11g00896 | Bma-Chr11:34141643 | 1.59E-84 | dispersed | |
Bma05g00983 | Bma-Chr5:48338294 | Bma11g00896 | Bma-Chr11:34141643 | 1.48E-132 | dispersed | |
Bma07g00707 | Bma-Chr7:16337777 | Bma11g00896 | Bma-Chr11:34141643 | 4.26E-141 | dispersed | |
Bma07g00769 | Bma-Chr7:22264983 | Bma11g00896 | Bma-Chr11:34141643 | 0 | dispersed | |
Bma07g00833 | Bma-Chr7:27670098 | Bma11g00896 | Bma-Chr11:34141643 | 2.19E-173 | dispersed | |
Bma07g01205 | Bma-Chr7:46835175 | Bma11g00896 | Bma-Chr11:34141643 | 0 | dispersed | |
Bma11g00814 | Bma-Chr11:25073133 | Bma11g00896 | Bma-Chr11:34141643 | 0 | dispersed | |
Bma11g00993 | Bma-Chr11:45126478 | Bma11g00896 | Bma-Chr11:34141643 | 5.71E-159 | dispersed | |
Bma11g00896 | Bma-Chr11:34141643 | Bma14g00807 | Bma-Chr14:9006692 | 0 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66798 | PF00069 | Pkinase | 9.60E-74 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00896 | - | - | zju:107414012 | 790.801 |