Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00896 ATGTCTTCGAAATCTGGAAGTAGCGGCCGAACGAGAGTCGGGAAGTATGAGCTGGGTCGCACTCTGGGCGAGGGTAATTTCGCAAAGGTGAAATTCGCTCGGAACATAGAGACCGGCGATAATGCCGCTATCAAAATCCTTGATAAGGAGAAAATTCTCAAGCACAAGATGATAGGCCAGATTAAAAGAGAAATATCAACAATGAAACTAATCAGACATCCTAATGTCATCCGCATGTATGAGGTGATGGCTAGCAGGACCAAGATTTACATTGTCATGGAATTTGTTACTGGTGGAGAATTGTTTGACAAAATTGCCAGTAAAGGGAAATTAAAAGAAGATGAGGCAAGAAAGTACTTCCAGCAGCTTATTAATGCTGTGGATTATTGTCATAGCAGAGGTGTTTTTCATCGTGACTTAAAGCCTGAAAATTTGCTGCTAGATTCTAATGGAGTTCTTAAAGTTTCTGATTTTGGGTTGAGTGCTCTACCTCAGCAAGTTCGAGAAGACGGTCTGCTCCACACAACCTGTGGCACACCAAATTATGTTGCGCCTGAGGTAATCAATAACAAAGGCTATGACGGAGTACTAGCAGATTTGTGGTCATGTGGTGTGATTCTTTTTGTCCTAATGGCTGGTTATTTGCCCTTTGAAGATTCCAACCTTGCAGTATTGTATAAAAAGATACATAAGGCTGAGTTCACTTGTCCATCATGGTTTTCGACGAGTGGAAAAAAGTTAATAAAGCGGATTCTGGATCCCAACCCCTCAACTCGAATTACCATTGCTGAGGTTATTGAGAATGAATGGTTTAAGAAAGGATATAAGCCACCCATTTATGAACAAGCTGACGTTACTCTTGATGATGTTGATGCTATCTTCAATGAATCCGGAGATACATGTAACCTTGTTGTAGAGAAGAGAGAAGACGGCTCTGTGGCTCCTGTCACCATGAATGCTTTTGAGCTTATCTCTACGTCTCAGGGCCTCAACCTTGGCTCACTTTTTGAAAAGCAAATGGGACTTGCCAAACGTGAAACAAGGTTCACATCCAATTGTCCTGCTAATGTGATCATTTCCAAGATTGAGGAAGCGGCAACTCCCTTGGGATTTGATGTGAAGAAAAATAACTTCAAGTTGAAACTTCAAGGAGGAAAAACTGGTCGTAAAGGTCATTTATCAGTTGCCACCGAGATTTATGAGGTTGCCCCTTCACTTTACATGGTCGAAGTTCGCAAAGCTGGAGGAGACACTTTAGAATTTCACAAGTTCTATAAGAACCTCTCCACTGGGCTGAAAGATATAGTATGGAAAACTGATGGTAGCATAGAGGAAGAAATTGGTGGCGCTGGTGTTGTACAATCTGGGTAA 1371 41.79 MSSKSGSSGRTRVGKYELGRTLGEGNFAKVKFARNIETGDNAAIKILDKEKILKHKMIGQIKREISTMKLIRHPNVIRMYEVMASRTKIYIVMEFVTGGELFDKIASKGKLKEDEARKYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGVLKVSDFGLSALPQQVREDGLLHTTCGTPNYVAPEVINNKGYDGVLADLWSCGVILFVLMAGYLPFEDSNLAVLYKKIHKAEFTCPSWFSTSGKKLIKRILDPNPSTRITIAEVIENEWFKKGYKPPIYEQADVTLDDVDAIFNESGDTCNLVVEKREDGSVAPVTMNAFELISTSQGLNLGSLFEKQMGLAKRETRFTSNCPANVIISKIEEAATPLGFDVKKNNFKLKLQGGKTGRKGHLSVATEIYEVAPSLYMVEVRKAGGDTLEFHKFYKNLSTGLKDIVWKTDGSIEEEIGGAGVVQSG 456
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 34141643 34154773 - Bma006627.1 Bma11g00896 91298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00896 456 ProSitePatterns Protein kinases ATP-binding region signature. 22 45 IPR017441 GO:0005524
Bma11g00896 456 Gene3D Kinase associated domain 1, KA1 313 438 - -
Bma11g00896 456 CDD STKc_SnRK3 15 270 - -
Bma11g00896 456 SUPERFAMILY Protein kinase-like (PK-like) 13 282 IPR011009 -
Bma11g00896 456 CDD CIPK_C 319 434 - -
Bma11g00896 456 PANTHER SERINE/THREONINE KINASE 10 443 - -
Bma11g00896 456 ProSiteProfiles Protein kinase domain profile. 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00896 456 Pfam NAF domain 315 375 IPR004041 GO:0007165
Bma11g00896 456 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bma11g00896 456 Gene3D Transferase(Phosphotransferase) domain 1 96 278 - -
Bma11g00896 456 SMART serkin_6 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00896 456 Gene3D Phosphorylase Kinase; domain 1 5 95 - -
Bma11g00896 456 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 10 443 - -
Bma11g00896 456 ProSiteProfiles NAF domain profile. 313 337 IPR018451 GO:0007165
Bma11g00896 456 Pfam Protein kinase domain 16 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00896 Bma14g00807 CCT
Bma07g00769 Bma11g00896 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g01053 Bma-Chr1:11050491 Bma11g00896 Bma-Chr11:34141643 1.59E-84 dispersed
Bma05g00983 Bma-Chr5:48338294 Bma11g00896 Bma-Chr11:34141643 1.48E-132 dispersed
Bma07g00707 Bma-Chr7:16337777 Bma11g00896 Bma-Chr11:34141643 4.26E-141 dispersed
Bma07g00769 Bma-Chr7:22264983 Bma11g00896 Bma-Chr11:34141643 0 dispersed
Bma07g00833 Bma-Chr7:27670098 Bma11g00896 Bma-Chr11:34141643 2.19E-173 dispersed
Bma07g01205 Bma-Chr7:46835175 Bma11g00896 Bma-Chr11:34141643 0 dispersed
Bma11g00814 Bma-Chr11:25073133 Bma11g00896 Bma-Chr11:34141643 0 dispersed
Bma11g00993 Bma-Chr11:45126478 Bma11g00896 Bma-Chr11:34141643 5.71E-159 dispersed
Bma11g00896 Bma-Chr11:34141643 Bma14g00807 Bma-Chr14:9006692 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66798 PF00069 Pkinase 9.60E-74 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00896 - - zju:107414012 790.801