Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00910 ATGGGACTGAATTCTCCATTGATGTGGCTACGAGGAGATGCTGGGGATCGAGGAATTCAATCTTTGAACTTTCCAGGAATTGGTCTGGCACCATGGATGCAGCCAAGACTTGATGCTTCCATGCTTGGTTTGCAATCTGACATGTATCAAGCCATGGCTGCTGCTGCACTGCAAGAGATGAGAGCTTCTGATCCATCTAAACTTCTTCAATTCCAGCAAGCCCAAAACCTTCCGGGTCGATCACCTACTCTCATTCAGCCCCATATGCTACAAAGCTCTCAATCTCAACCAGCTTTTCTTCCAACTGATGAAGAAAGCCCACATCATTCTCAAGCACAATCTCAAACTCAATTGCATGTTCTTCAGCAGCGGATGAATCAACAGAAGCCATTCAGTAATCAACAGCAGCAGCAGCTGTTTGATCACCAGATTCCACCAAGCACTATTTCTACCATGTCTCAGTTTGTGTCAGCTTCTCAATCCCCATCACCGTCAGTGCAAACACTTCCATCATGCCCAAAGAAGAGCTTTTCCGAGTCCATAGTTAACCCAGTGATAAATCCTGTTATATCACCATTAGACAGCCTCTTATGCTCTTTTCCCCCAGATGAATCAACTCAGTTGCTTAATCTGGCTAGACCCAACTCATTGTTGCCTTCTTCTTCATGGCCTTCAAAGCGAGCTGCAGTTGATCCTCTGCTCTCCTCGAGTGCTTCTCAATATGTTATACCCAATTTAGATTATATCGGATCATCCCAAACTAATATCTCCCAAAATTCTGTTTCATTGCCACCATTTCCTGTTCGAGATTGCACGATTGATCCAGGAGGCACTGATCCTCAAGGCCGTCTTTTATTTGGTGTTAATATAGAGTCGTCCTCTCTTTTAATGCAAAATGGAATGTCAAGCCTTAGGGGAGTCGGCAGTGATTGTGATTCATCAACTCTACCCTTTTGTTCCAACTACATGAGCACTGCGGCTACCAATTTCATGGGGAATCCAACCTTGGCACCTTCCAGTTGCATTGATGAAGTGAGTTTCATGCAGTCCACAGAAAATGTTGGCCAAGTAAATCCACCGATGAGAACCTTTGTTAAGGTTTACAAGTCGGGGTCCTTTGGTAGGTCATTGGATATTACAAAATTCAGCAGCTACCATGAGCTACGCAGTGAGCTTGCTCGAATGTTTGGGCTTGAAGGCGAGCTGGAGGACCCTTTGAGATCAGGCTGGCAGCTTGTATTCGTCGACCGGGAGAATGATGTTCTTCTCCTCGGAGATGGGCCCTGGCCGGAGTTCGTGAATAGTGTTTGGTGCATAAAAATTTTATCACCTCAAGAAGTTCAAGAGATGGGAAAACGAGGCCTCGAGCTCTTGAACTCAGTACCGATTCAGAGGCTCTCCAACAGCAGTTGTGATAACTACGCAACTCGTCAGGACTCCAGAAACTTGGCTACGGGGATTACTTCTGTCGGGTCCATCGACTATTGA 1488 45.77 MGLNSPLMWLRGDAGDRGIQSLNFPGIGLAPWMQPRLDASMLGLQSDMYQAMAAAALQEMRASDPSKLLQFQQAQNLPGRSPTLIQPHMLQSSQSQPAFLPTDEESPHHSQAQSQTQLHVLQQRMNQQKPFSNQQQQQLFDHQIPPSTISTMSQFVSASQSPSPSVQTLPSCPKKSFSESIVNPVINPVISPLDSLLCSFPPDESTQLLNLARPNSLLPSSSWPSKRAAVDPLLSSSASQYVIPNLDYIGSSQTNISQNSVSLPPFPVRDCTIDPGGTDPQGRLLFGVNIESSSLLMQNGMSSLRGVGSDCDSSTLPFCSNYMSTAATNFMGNPTLAPSSCIDEVSFMQSTENVGQVNPPMRTFVKVYKSGSFGRSLDITKFSSYHELRSELARMFGLEGELEDPLRSGWQLVFVDRENDVLLLGDGPWPEFVNSVWCIKILSPQEVQEMGKRGLELLNSVPIQRLSNSSCDNYATRQDSRNLATGITSVGSIDY 495
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 36693230 36695115 + Bma006658.1 Bma11g00910 91312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00910 495 MobiDBLite consensus disorder prediction 90 117 - -
Bma11g00910 495 MobiDBLite consensus disorder prediction 153 173 - -
Bma11g00910 495 Gene3D - 358 451 - -
Bma11g00910 495 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 2 474 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bma11g00910 495 ProSiteProfiles PB1 domain profile. 362 446 IPR000270 GO:0005515
Bma11g00910 495 PANTHER AUXIN RESPONSE FACTOR 6 2 474 - -
Bma11g00910 495 SUPERFAMILY CAD & PB1 domains 356 437 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00910 Bma-Chr11:36693230 Bma14g00953 Bma-Chr14:10844578 2.40E-114 dispersed
Bma11g00910 Bma-Chr11:36693230 Bma07g00661 Bma-Chr7:11296912 4.04E-37 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58068 None None None None Bma TR
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00910 - - jre:109011079 664.07