Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00950 ATGGCTGCTTCCACCATGGCTCTTTCTTCTCCTTCACTCGCCGGAAAGGCTGTGAAGTTTTCCCCCTCCGCTTCCGAGGTTGTCGGAAATGGAAGAGTCAGCATGAGGAAAACTGGCGGAAAGCCTTCTTCCGGCAGCCCGTGGTACGGTCCCGACAGAGTCAAGTATCTGGGTCCATTCTCCGGCTCCCCTCCCTCCTACCTCACTGGTGAATTCCCCGGTGACTACGGGTGGGACACTGCTGGACTCTCCGCCGACCCGGAGACCTTCGCCAAGAACAGAGAACTCGAAGTAATCCACGCCAGATGGGCCATGCTCGGCACTCTCGGATGCGTCTTCCCAGAACTCCTCTCCCGAAACGGAGTCCAGTTCGGCGAAGCTATCTGGTTCAAAGCCGGATCCCAGATTTTCCAAGAGGGAGGGCTTAACTACTTGGGCAACCCAAGCTTGGTTCACGCTCAGAGCATCCTCGCAATATGGGCCTCTCAGGTCATCTTGATGGGCGCCGTCGAGGGTTACCGTATTGCCGGTGGACCACTCGGAGATGTCACCGACCCGATCTACCCAGGTGGAAGCTTCGACCCATTGGGTCTCGCCGACGACCCAGAAGCATTCGCAGAGCTGAAAGTGAAGGAGCTCAAGAACGGAAGGCTGGCTATGTTTTCTATGTTCGGGTTCTACGTGCAAGCGATTGTCACCGGAAAAGGTCCGTTGGAGAACCTCGCAGACCACCTCGCCGACCCTGTTAACAACAACGCTTGGGCATATGCCACCAACTTTGTCCCCGGGAAATAA 795 56.6 MAASTMALSSPSLAGKAVKFSPSASEVVGNGRVSMRKTGGKPSSGSPWYGPDRVKYLGPFSGSPPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHARWAMLGTLGCVFPELLSRNGVQFGEAIWFKAGSQIFQEGGLNYLGNPSLVHAQSILAIWASQVILMGAVEGYRIAGGPLGDVTDPIYPGGSFDPLGLADDPEAFAELKVKELKNGRLAMFSMFGFYVQAIVTGKGPLENLADHLADPVNNNAWAYATNFVPGK 264
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 42441085 42441879 - Bma006741.1 Bma11g00950 91352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00950 264 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 264 IPR001344 GO:0009765|GO:0016020
Bma11g00950 264 SUPERFAMILY Chlorophyll a-b binding protein 47 261 - -
Bma11g00950 264 Gene3D Chlorophyll a/b binding protein domain 55 257 - -
Bma11g00950 264 Pfam Chlorophyll A-B binding protein 64 230 IPR022796 -
Bma11g00950 264 PANTHER CHLOROPHYLL A-B BINDING PROTEIN 3, CHLOROPLASTIC 1 264 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00950 Bma14g00934 CCT
Bma11g00950 Bma14g00934 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00950 Bma-Chr11:42441085 Bma14g00935 Bma-Chr14:10678062 0 dispersed
Bma11g00950 Bma-Chr11:42441085 Bma11g00951 Bma-Chr11:42443230 0 tandem
Bma01g01496 Bma-Chr1:29519144 Bma11g00950 Bma-Chr11:42441085 1.02E-159 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00950 K08912 - cpap:110819729 507.294