Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00990 ATGGATATCTTCAAGGGTGTTAATCTGAAGTTGTTGGCCATGGAACATATGCTAAAGCAGCATCCAAAGTGGCAAGGAAGAGCTGTTTTGGTACAGATTGCAAATCCCGCGAGGGGAAGAGGTAAAGATCTTGAAGAAATACAGGCCGAAATACGAGCAAGCTGCAAAAGAATTAATGACAGTTTTCGGCAGCCTAATTATGAACCAATTGTCTTCATCGATAGGCCAGTTTCTCTCAGTGAAAGGGCTGCATACTTTACCATTGCTGAGTGTGTAGTGGTCACAGCTGTGAGGGACGGAATGAATCTTACACCTTACGAATACATAGTGTGCAGGCAGGGTTTATCCGAAGCGGATTCTACCTCAGAATTGAGTGGACCAAAGAAGAGCATGTTAGTAGTATCCGAGTTTATTGGATGTTCCCCTTCACTGAGTGGTGCCATTCGGGTCAATCCTTGGAACATCGAAACAACTGCTGAGGCGATGAATGAGGCGATTTCAATGTCCGACGCTGAGAAGCAGTTGAGACATGAGAAGCATTATAGGTATATAAGCACTCATCATGTGGCTTACTGGTCCAAGAGCTTTTTCCAAGACATGGAAAGAACTTGTAAAGAGCATTTTCGAAGACGGTGTTGGGGAATCGGTTTGAGCTTTGGTTTCAGAGTAGTCGCTCTTGACCCTAATTTCAGAAAGCTCTCTAGTGATGCCATTGTCTCTGCTTATATCAAGTCCAAGAATAGAGCTATACTTTTAGATTATGATGGAACTATTATGCCTCAGACATCAATCAACAAAGCTCCAACGCAGGAGGTTATTACGATCATTAATACGCTCTGTGGGGATGTTAAGAATTCTGTTTTTATCGTCAGCGGAAGAGGAAGGGACAGTTTGGGCAAGTGGTTTTCTCCTTGCAAGAAGCTCGGAATTGCCGCTGAGCATGGTTATTTTATGAGGTGGTCTGCCTTTGATGAATGGGAGAACTGTGGTCAAAGCAATGATTTTGGTTGGATACAGATAGCAGAGCCAGTTCTGAAACTATATACAGAAGCCACAGATGGTTCTGCAATTGAAGCGAAGGAGAGTGCATTGGTCTGGCATCATCGTGACGCAGACCCGGATTTCGGGTCTAGCCAGGCAAAGGAATTGTTAGACCACCTTGAAAGTGTTCTAGCCAATGAGCCAGTTGCTGTCAAAAGTGGTCAGTTCATTGTTGAAGTAAAACCACAGGGAGTGAGTAAAGGGATGGTTGCAGAAAAGATCTTCTCATCAATGGCTGAGAATGGTAGGCAGGCAGATTTTGTACTATGTATTGGTGACGATAGATCAGACGAGGAAATGTTTGAGATCATCGGCAATGCCGTAACAAATGGAATCCTCTCACCAAATACAGCTGTTTTTGCTTGCACAGTCGGACAGAAGCCGAGTAAAGCAAAATACTATTTAGACGATACGACGGAGGTCATATCAACGCTGGATGCCCTTGCAGAAGAATCAGATCTCTCGCCCTCACCCTCTTCGGACTCCCCTTGA 1533 44.42 MDIFKGVNLKLLAMEHMLKQHPKWQGRAVLVQIANPARGRGKDLEEIQAEIRASCKRINDSFRQPNYEPIVFIDRPVSLSERAAYFTIAECVVVTAVRDGMNLTPYEYIVCRQGLSEADSTSELSGPKKSMLVVSEFIGCSPSLSGAIRVNPWNIETTAEAMNEAISMSDAEKQLRHEKHYRYISTHHVAYWSKSFFQDMERTCKEHFRRRCWGIGLSFGFRVVALDPNFRKLSSDAIVSAYIKSKNRAILLDYDGTIMPQTSINKAPTQEVITIINTLCGDVKNSVFIVSGRGRDSLGKWFSPCKKLGIAAEHGYFMRWSAFDEWENCGQSNDFGWIQIAEPVLKLYTEATDGSAIEAKESALVWHHRDADPDFGSSQAKELLDHLESVLANEPVAVKSGQFIVEVKPQGVSKGMVAEKIFSSMAENGRQADFVLCIGDDRSDEEMFEIIGNAVTNGILSPNTAVFACTVGQKPSKAKYYLDDTTEVISTLDALAEESDLSPSPSSDSP 510
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45085561 45087805 + Bma006821.1 Bma11g00990 91392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00990 510 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 502 IPR001830 GO:0003824|GO:0005992
Bma11g00990 510 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1 205 - -
Bma11g00990 510 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 250 455 IPR006379 -
Bma11g00990 510 Gene3D Glycogen Phosphorylase B; 1 185 - -
Bma11g00990 510 SUPERFAMILY HAD-like 248 496 IPR036412 -
Bma11g00990 510 Pfam Glycosyltransferase family 20 1 201 IPR001830 GO:0003824|GO:0005992
Bma11g00990 510 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 7-RELATED 1 502 - -
Bma11g00990 510 CDD HAD_TPP 249 488 - -
Bma11g00990 510 Gene3D - 331 410 - -
Bma11g00990 510 TIGRFAM T6PP: trehalose-phosphatase 245 496 IPR003337 GO:0003824|GO:0005992
Bma11g00990 510 Pfam Trehalose-phosphatase 251 485 IPR003337 GO:0003824|GO:0005992
Bma11g00990 510 Gene3D - 250 482 IPR023214 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00990 Bma-Chr11:45085561 Bma14g00980 Bma-Chr14:11404314 0 dispersed
Bma11g00990 Bma-Chr11:45085561 Bma07g00825 Bma-Chr7:26457853 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00990 K16055 - cpap:110822041 906.746