Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00993 ATGGCGGAACCCAATTGGAGTGGCATCGAGAGCAAGAACAAGGATTACCCTTCTCTTCTTTTGGGCAGATACGAGATAGGGAAGCTCCTTGGCCATGGTACCTTCGCAAAGGTTTATAACGCCCGAAACGTCAGATCGAACGATGTTGTCGCCATTAAAGTTATCGATAAAGAGAAGATTTTGAAGGGTGGACTTATGACTCATGTCAAGCGGGAGATTTCGATTCTCCGACGCGTTCGCCACCCTAATATAGTTCAACTCATCGAAGTTATGGCGACCAAGGCTAAGATCTACTTTGTCATGGAGTATGTTGGTGGCGGAGAGCTTTTCAAAAAGGTCGCCAAAGGTCGGCTAAAAGAAGAAGTTGCTCGGAAATATTTTCAGCAATTGATCTCCGCCGTAGGATTCTGCCACGCTCGCGGTGTTTTTCACCGGGATCTCAAACCGGAGAATCTTTTGCTCGACGAGAATGGTGATCTCAAAGTTTCAGATTTTGGGTTAAGCGCCGTCTCCGATCAAATTCGGCAGGACGGTTTGTTTCACACGTTTTGTGGAACTCCGGCGTATGTTGCGCCGGAGGTTTTGGCAAGAAAAGGGTACGAAGCTGCAAAGGTCGATATCTGGTCTTGTGGGGTTATTCTTTTTGTTCTTATGGCTGGCTATTTACCATTTCACGATCAAAATGTATTGGCAATGTACAAAAAAATTTATAAGGGTGACTTTCGGAGTCCGAGATGGTTCTCGCCGGACCTAATTCAGCTCCTTTCGCGTCTTCTGGATACCAATCCGAAGACCCGAATCACCATTCCTGAAATCATGGAGAACCCATGGTTCAAGAAAGGGTTTAAGCATATCAAATTCTATATTGAGGATGATAAGCTTTGTAATGTTGTTGATGATGTTGAAGATGTCGATTCACTTTCTGAGTATTCAATGTCCGAATCAGATTCTGAAATGGTGTCTCGGAGGAGGATTACTTCATTACCTAGACCAGCGAGTTTGAACGCATTCGATATCATTTCTCCTAGTTTTAATCTTTCGGGGTTGTTCGAAGATGGCGGAGAAGAGGCGAGATTTATATTGAATGCCCCTGTTTCGCAGATCATATCAAAAATAGAGGAAATTGCTCAGTTGAAGAGCTTCACTGTAAGGAAGAAGGACTGCAGAGTGAGCTTGGAGGGATCTAGAGATGGCGTAAAAGGTCCATTGACAATGGCAGCCGAGATATTTGAATTAACCCCATCCTTAGTCATGGTGGAAGTTAAGAAGAAAGCCGGAGATAAGACAGAATATGAACACTTCTTTAACAGCGAATTGAAACCCGGATTGCAGAGTTTGATGCTGGACGTGAAGGAATCTTCTGCTTCTTCAAACATACCTTCAGATACTGAATAG 1395 44.01 MAEPNWSGIESKNKDYPSLLLGRYEIGKLLGHGTFAKVYNARNVRSNDVVAIKVIDKEKILKGGLMTHVKREISILRRVRHPNIVQLIEVMATKAKIYFVMEYVGGGELFKKVAKGRLKEEVARKYFQQLISAVGFCHARGVFHRDLKPENLLLDENGDLKVSDFGLSAVSDQIRQDGLFHTFCGTPAYVAPEVLARKGYEAAKVDIWSCGVILFVLMAGYLPFHDQNVLAMYKKIYKGDFRSPRWFSPDLIQLLSRLLDTNPKTRITIPEIMENPWFKKGFKHIKFYIEDDKLCNVVDDVEDVDSLSEYSMSESDSEMVSRRRITSLPRPASLNAFDIISPSFNLSGLFEDGGEEARFILNAPVSQIISKIEEIAQLKSFTVRKKDCRVSLEGSRDGVKGPLTMAAEIFELTPSLVMVEVKKKAGDKTEYEHFFNSELKPGLQSLMLDVKESSASSNIPSDTE 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45126478 45127872 + Bma006825.1 Bma11g00993 91395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00993 464 CDD CIPK_C 335 444 - -
Bma11g00993 464 Gene3D Kinase associated domain 1, KA1 331 448 - -
Bma11g00993 464 ProSitePatterns Serine/Threonine protein kinases active-site signature. 142 154 IPR008271 GO:0004672|GO:0006468
Bma11g00993 464 PANTHER - 14 448 - -
Bma11g00993 464 ProSiteProfiles Protein kinase domain profile. 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00993 464 Gene3D Transferase(Phosphotransferase) domain 1 14 330 - -
Bma11g00993 464 Pfam Protein kinase domain 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00993 464 ProSiteProfiles NAF domain profile. 329 351 IPR018451 GO:0007165
Bma11g00993 464 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 14 448 - -
Bma11g00993 464 SUPERFAMILY Protein kinase-like (PK-like) 20 327 IPR011009 -
Bma11g00993 464 Pfam NAF domain 331 385 IPR004041 GO:0007165
Bma11g00993 464 SMART serkin_6 24 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma11g00993 464 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma07g00833 Bma11g00993 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00808 Bma-Chr7:25024271 Bma11g00993 Bma-Chr11:45126478 0 dispersed
Bma07g00811 Bma-Chr7:25338716 Bma11g00993 Bma-Chr11:45126478 0 dispersed
Bma11g00636 Bma-Chr11:10971667 Bma11g00993 Bma-Chr11:45126478 2.15E-170 dispersed
Bma11g00993 Bma-Chr11:45126478 Bma11g00896 Bma-Chr11:34141643 5.71E-159 dispersed
Bma11g00993 Bma-Chr11:45126478 Bma11g00996 Bma-Chr11:45255288 0 proximal
Bma01g02446 Bma-Chr1:82077392 Bma11g00993 Bma-Chr11:45126478 1.41E-14 transposed
Bma02g00077 Bma-Chr2:665029 Bma11g00993 Bma-Chr11:45126478 8.74E-50 transposed
Bma02g01141 Bma-Chr2:53187363 Bma11g00993 Bma-Chr11:45126478 1.30E-48 transposed
Bma01g01458 Bma-Chr1:26284329 Bma11g00993 Bma-Chr11:45126478 0 wgd
Bma11g00993 Bma-Chr11:45126478 Bma07g00833 Bma-Chr7:27670098 7.71E-174 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66799 PF00069 Pkinase 1.20E-75 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00993 - - csv:101214053 749.584