Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00996 ATGGCTGGCTATTTACCATTTCACGATCAAAATGTATTGGCAATGTACAAAAAAATTTATAAGGGTGACTTTCGGAGTCCGAGATGGTTCTCGCCGGACCTAATTCAGCTCCTTTCGCGTCTTCTGGATACCAATCCGAAGACCCGAATCACCATTCCTGAAATCATGGAGAACCCATGGTTCAAGAAAGGGTTTAAGCATATCAAATTCTATATTGAGGATGATAAGCTTTGTAATGTTGTTGATGATGTTGAAGATGTCGATTCACTTTCTGAGTATTCAATGTCCGAATCAGATTCTGAAATGGTGTCTCGGAGGAGGATTACTTCATTACCTAGACCAGCGAGTTTGAACGCATTCGATATCATTTCTCCTAGTTTTAATCTTTCGGGGTTGTTCGAAGATGGCGGAGAAGAGGCGAGATTTATATCGAATGCCCCTGTTTCGCAGATCATATCAAAAATAGAGGAAATTGCTCAGTTGAAGAGCTTCACTGTAAGGAAGAAGGACTGCAGAGTGAGCTTGGAGGGATCTAGAGATGGCGTAAAAGGTCCATTGACAATGGCAGCCGAAATATTTGAATTAACCCCATCCTTAGTCATGGTGGAAGTTAAAAAGAAAGCCGGAGATAAGACAGAATATGAACACTTCTTTAACAGCGAATTGAAACCCGGATTGCAGAGTTTGATGCTGGACGTGAAGGAATCTTCTGCTTCTTCAAACATACCTTCAGATACTGAATAG 744 41.26 MAGYLPFHDQNVLAMYKKIYKGDFRSPRWFSPDLIQLLSRLLDTNPKTRITIPEIMENPWFKKGFKHIKFYIEDDKLCNVVDDVEDVDSLSEYSMSESDSEMVSRRRITSLPRPASLNAFDIISPSFNLSGLFEDGGEEARFISNAPVSQIISKIEEIAQLKSFTVRKKDCRVSLEGSRDGVKGPLTMAAEIFELTPSLVMVEVKKKAGDKTEYEHFFNSELKPGLQSLMLDVKESSASSNIPSDTE 247
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45255288 45256031 + Bma006828.1 Bma11g00996 91398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00996 247 CDD CIPK_C 118 227 - -
Bma11g00996 247 SUPERFAMILY Protein kinase-like (PK-like) 2 93 IPR011009 -
Bma11g00996 247 Gene3D Transferase(Phosphotransferase) domain 1 1 114 - -
Bma11g00996 247 Pfam NAF domain 114 168 IPR004041 GO:0007165
Bma11g00996 247 Gene3D Kinase associated domain 1, KA1 115 231 - -
Bma11g00996 247 PANTHER - 1 231 - -
Bma11g00996 247 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 18 1 231 - -
Bma11g00996 247 ProSiteProfiles NAF domain profile. 112 134 IPR018451 GO:0007165
Bma11g00996 247 ProSiteProfiles Protein kinase domain profile. 1 61 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00996 Bma-Chr11:45255288 Bma07g00808 Bma-Chr7:25024271 7.04E-154 dispersed
Bma11g00993 Bma-Chr11:45126478 Bma11g00996 Bma-Chr11:45255288 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00996 - - csv:101214053 373.244