Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g00996 | ATGGCTGGCTATTTACCATTTCACGATCAAAATGTATTGGCAATGTACAAAAAAATTTATAAGGGTGACTTTCGGAGTCCGAGATGGTTCTCGCCGGACCTAATTCAGCTCCTTTCGCGTCTTCTGGATACCAATCCGAAGACCCGAATCACCATTCCTGAAATCATGGAGAACCCATGGTTCAAGAAAGGGTTTAAGCATATCAAATTCTATATTGAGGATGATAAGCTTTGTAATGTTGTTGATGATGTTGAAGATGTCGATTCACTTTCTGAGTATTCAATGTCCGAATCAGATTCTGAAATGGTGTCTCGGAGGAGGATTACTTCATTACCTAGACCAGCGAGTTTGAACGCATTCGATATCATTTCTCCTAGTTTTAATCTTTCGGGGTTGTTCGAAGATGGCGGAGAAGAGGCGAGATTTATATCGAATGCCCCTGTTTCGCAGATCATATCAAAAATAGAGGAAATTGCTCAGTTGAAGAGCTTCACTGTAAGGAAGAAGGACTGCAGAGTGAGCTTGGAGGGATCTAGAGATGGCGTAAAAGGTCCATTGACAATGGCAGCCGAAATATTTGAATTAACCCCATCCTTAGTCATGGTGGAAGTTAAAAAGAAAGCCGGAGATAAGACAGAATATGAACACTTCTTTAACAGCGAATTGAAACCCGGATTGCAGAGTTTGATGCTGGACGTGAAGGAATCTTCTGCTTCTTCAAACATACCTTCAGATACTGAATAG | 744 | 41.26 | MAGYLPFHDQNVLAMYKKIYKGDFRSPRWFSPDLIQLLSRLLDTNPKTRITIPEIMENPWFKKGFKHIKFYIEDDKLCNVVDDVEDVDSLSEYSMSESDSEMVSRRRITSLPRPASLNAFDIISPSFNLSGLFEDGGEEARFISNAPVSQIISKIEEIAQLKSFTVRKKDCRVSLEGSRDGVKGPLTMAAEIFELTPSLVMVEVKKKAGDKTEYEHFFNSELKPGLQSLMLDVKESSASSNIPSDTE | 247 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 45255288 | 45256031 | + | Bma006828.1 | Bma11g00996 | 91398 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g00996 | 247 | CDD | CIPK_C | 118 | 227 | - | - | |
Bma11g00996 | 247 | SUPERFAMILY | Protein kinase-like (PK-like) | 2 | 93 | IPR011009 | - | |
Bma11g00996 | 247 | Gene3D | Transferase(Phosphotransferase) domain 1 | 1 | 114 | - | - | |
Bma11g00996 | 247 | Pfam | NAF domain | 114 | 168 | IPR004041 | GO:0007165 | |
Bma11g00996 | 247 | Gene3D | Kinase associated domain 1, KA1 | 115 | 231 | - | - | |
Bma11g00996 | 247 | PANTHER | - | 1 | 231 | - | - | |
Bma11g00996 | 247 | PANTHER | CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 18 | 1 | 231 | - | - | |
Bma11g00996 | 247 | ProSiteProfiles | NAF domain profile. | 112 | 134 | IPR018451 | GO:0007165 | |
Bma11g00996 | 247 | ProSiteProfiles | Protein kinase domain profile. | 1 | 61 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma11g00996 | Bma-Chr11:45255288 | Bma07g00808 | Bma-Chr7:25024271 | 7.04E-154 | dispersed | |
Bma11g00993 | Bma-Chr11:45126478 | Bma11g00996 | Bma-Chr11:45255288 | 0 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g00996 | - | - | csv:101214053 | 373.244 |