Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g00999 ATGGCAGGAATCATGTTATTTGGGAAGATGATCATACTGCAGAATAAGAAAGAGAATGACGAGGAAACAACAGCTGATCCAACTGAGGAGAAGATGCCTGAAAAGGTGATCCAATGTCCGAGATGCAAGAGCAATGAGACTAAATTTTGTTACTTCAACAACTACAACGTTAACCAGCCAAGACATTTCTGCAAAGGTTGTCAAAGGTATTGGACAGCCGGGGGTGCCCTCCGCAACGTCCCTATTGGCGCTGGTCGCCGGGAGAGCAAGCCGCTTTGCGCCAACGTGAACCGGTTTCCTCGTGGGGCAGCAGATTGGCCTTTTCCGACCTCACAAGAAGAATTCTGGAAAGATTTTCCGGCCAAGCGCCGGAGAGTTGGTCAATTTAGTCAAAAAATTTGA 402 47.76 MAGIMLFGKMIILQNKKENDEETTADPTEEKMPEKVIQCPRCKSNETKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRESKPLCANVNRFPRGAADWPFPTSQEEFWKDFPAKRRRVGQFSQKI 133
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45383043 45383444 + Bma006831.1 Bma11g00999 91401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g00999 133 ProSitePatterns Zinc finger Dof-type signature. 39 75 IPR003851 GO:0003677|GO:0006355
Bma11g00999 133 ProSiteProfiles Zinc finger Dof-type profile. 37 91 IPR003851 GO:0003677|GO:0006355
Bma11g00999 133 PANTHER CYCLIC DOF FACTOR 2 14 95 IPR045174 GO:0003700|GO:0006355
Bma11g00999 133 Pfam Dof domain, zinc finger 35 90 IPR003851 GO:0003677|GO:0006355
Bma11g00999 133 PANTHER CYCLIC DOF FACTOR 3-LIKE 14 95 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma11g00999 Bma14g01000 CCT
Bma01g01447 Bma11g00999 CCT
Bma07g00840 Bma11g00999 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma11g00999 Bma-Chr11:45383043 Bma14g01000 Bma-Chr14:11645662 1.04E-47 dispersed
Bma01g01447 Bma-Chr1:25011422 Bma11g00999 Bma-Chr11:45383043 3.15E-47 wgd
Bma11g00999 Bma-Chr11:45383043 Bma07g00840 Bma-Chr7:28305636 4.79E-61 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
58075 PF02701 zf-Dof 8.30E-32 No_clan Bma TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g00999 - - zju:107410557 159.458