Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma11g01000 ATGAGAGTTGACATGGACTGTCCAGGTTGCCAGTCAAAAATCAGAAAAGCCCTTCAAAAACTAGAAGGTGTGGATGTAATAGACATAGATATGGACATGCAGAAGGTGACAGTGATGGGGTGGGCAAACCAGGAGAAAGTGCTGAAAGCGGTGAGAAGAACAGGAAGAACAGCAGAGTTATGGCCGTACCCATACAACTCAGAATATCAAAACTCCATTGACGCGTACCAGCAGAGCTATTACGATCATCTTCCTCAAGATCAGATTCAGACATTTGAAACAGTTCCAAGCTCTTATAGCTACAGAAGCCGTGGATATAGTGGTTTAAATTATGGGTATAACCATCAACCTCCTTATTCAACTCTTATTGATGAGAAATCTGAAGCCATGTTCAGTGATGAAAATCCCCATGCTTGTTCCATAATAGAGAAGAAGAAGAAGATCGCCATGGCTTCCAATCAGGAACGGGAGAACTACGTCTACATCGCCAAGCTGGCTGAGCAAGCTGAGCGCTATGACGAAATGGTGGATGCAATGAAAAACGTGGCTATGCTTGATGTGGAGCTTACGGTGGAGGAGCGAAATTTACTCTCCGTTGGATACAAAAACGTGGTTGGAGCTCGTAGAGCTTCCTGGAGGATATTGTCTTCGATTGAGCAGAAAGAGGAAACTAAAGGAAACGATCATAATGTGAAGCGGATCAAGGACTATCGGCAGAAGGTTGAGTCCGAGCTCTCGACCATCTGTAATGATATAATGGTTGTGATCGATGAGCATCTGATTCCTTCTTGCGCTGCTGGAGAATCCACGGTCTTTTTCTACAAAATGAAAGGGGATTATTATCGGTATTTGGCTGAATTTAAGAGTGGTGAGGATAGGAAAGAAGCTGCCGATCATTCTATGAAAGCATATTTGGCAGCTTCTAGTAAAGCAACGTCAGACTTACCTCCAACACATCCCATCAGACTTGGTCTGGCCTTGAACTTCTCTGTTTTTTACTACGAGATTATGAACTCTCCTGAAAGCTTTTTTTTTTTCAGGGCTTGTCACCTGGCAAAGCAAGCTTTTGATGAAGCAATCTCAGAGTTAGATACTCTAAGCGAGGAGTCCTACAAAGATAGCACACTGATAATGCAGCTTTTGAGAGACAACCTCACTTTGTGGACATCTGACATTCCAGAAGACGGAGGTAACTCAAACAAAAACGAAGGAAATAATTTTTAA 1224 42.89 MRVDMDCPGCQSKIRKALQKLEGVDVIDIDMDMQKVTVMGWANQEKVLKAVRRTGRTAELWPYPYNSEYQNSIDAYQQSYYDHLPQDQIQTFETVPSSYSYRSRGYSGLNYGYNHQPPYSTLIDEKSEAMFSDENPHACSIIEKKKKIAMASNQERENYVYIAKLAEQAERYDEMVDAMKNVAMLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEETKGNDHNVKRIKDYRQKVESELSTICNDIMVVIDEHLIPSCAAGESTVFFYKMKGDYYRYLAEFKSGEDRKEAADHSMKAYLAASSKATSDLPPTHPIRLGLALNFSVFYYEIMNSPESFFFFRACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGNSNKNEGNNF 407
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
11 45385981 45394422 - Bma006832.1 Bma11g01000 91402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma11g01000 407 Coils Coil 162 182 - -
Bma11g01000 407 ProSitePatterns 14-3-3 proteins signature 2. 371 390 IPR023409 -
Bma11g01000 407 Pfam 14-3-3 protein 163 389 IPR023410 -
Bma11g01000 407 Gene3D - 1 59 - -
Bma11g01000 407 ProSiteProfiles Heavy-metal-associated domain profile. 5 60 IPR006121 GO:0046872
Bma11g01000 407 CDD HMA 1 59 IPR006121 GO:0046872
Bma11g01000 407 Gene3D - 134 401 IPR036815 -
Bma11g01000 407 Pfam Heavy-metal-associated domain 2 56 IPR006121 GO:0046872
Bma11g01000 407 PRINTS 14-3-3 protein zeta signature 362 391 IPR000308 -
Bma11g01000 407 PRINTS 14-3-3 protein zeta signature 188 217 IPR000308 -
Bma11g01000 407 PRINTS 14-3-3 protein zeta signature 268 290 IPR000308 -
Bma11g01000 407 PRINTS 14-3-3 protein zeta signature 303 329 IPR000308 -
Bma11g01000 407 PRINTS 14-3-3 protein zeta signature 237 261 IPR000308 -
Bma11g01000 407 SUPERFAMILY HMA, heavy metal-associated domain 3 62 IPR036163 GO:0046872
Bma11g01000 407 PANTHER 14-3-3 PROTEIN 153 398 IPR000308 -
Bma11g01000 407 ProSitePatterns 14-3-3 proteins signature 1. 194 204 IPR023409 -
Bma11g01000 407 SUPERFAMILY 14-3-3 protein 155 391 IPR036815 -
Bma11g01000 407 SMART 1433_4 156 402 IPR023410 -
Bma11g01000 407 PANTHER 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED 153 398 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01394 Bma-Chr2:56212509 Bma11g01000 Bma-Chr11:45385981 1.74E-154 dispersed
Bma08g00303 Bma-Chr8:4288061 Bma11g01000 Bma-Chr11:45385981 2.97E-26 dispersed
Bma10g01145 Bma-Chr10:38982569 Bma11g01000 Bma-Chr11:45385981 7.78E-25 dispersed
Bma11g01000 Bma-Chr11:45385981 Bma12g00720 Bma-Chr12:32286893 1.25E-152 dispersed
Bma12g01122 Bma-Chr12:43496638 Bma11g01000 Bma-Chr11:45385981 1.02E-25 dispersed
Bma12g00113 Bma-Chr12:1758067 Bma11g01000 Bma-Chr11:45385981 1.01E-07 transposed
Bma12g00123 Bma-Chr12:1842669 Bma11g01000 Bma-Chr11:45385981 7.38E-08 transposed
Bma11g01000 Bma-Chr11:45385981 Bma07g00843 Bma-Chr7:28407876 1.22E-78 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma11g01000 K06630 - csv:101208446 428.713