Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma11g01000 | ATGAGAGTTGACATGGACTGTCCAGGTTGCCAGTCAAAAATCAGAAAAGCCCTTCAAAAACTAGAAGGTGTGGATGTAATAGACATAGATATGGACATGCAGAAGGTGACAGTGATGGGGTGGGCAAACCAGGAGAAAGTGCTGAAAGCGGTGAGAAGAACAGGAAGAACAGCAGAGTTATGGCCGTACCCATACAACTCAGAATATCAAAACTCCATTGACGCGTACCAGCAGAGCTATTACGATCATCTTCCTCAAGATCAGATTCAGACATTTGAAACAGTTCCAAGCTCTTATAGCTACAGAAGCCGTGGATATAGTGGTTTAAATTATGGGTATAACCATCAACCTCCTTATTCAACTCTTATTGATGAGAAATCTGAAGCCATGTTCAGTGATGAAAATCCCCATGCTTGTTCCATAATAGAGAAGAAGAAGAAGATCGCCATGGCTTCCAATCAGGAACGGGAGAACTACGTCTACATCGCCAAGCTGGCTGAGCAAGCTGAGCGCTATGACGAAATGGTGGATGCAATGAAAAACGTGGCTATGCTTGATGTGGAGCTTACGGTGGAGGAGCGAAATTTACTCTCCGTTGGATACAAAAACGTGGTTGGAGCTCGTAGAGCTTCCTGGAGGATATTGTCTTCGATTGAGCAGAAAGAGGAAACTAAAGGAAACGATCATAATGTGAAGCGGATCAAGGACTATCGGCAGAAGGTTGAGTCCGAGCTCTCGACCATCTGTAATGATATAATGGTTGTGATCGATGAGCATCTGATTCCTTCTTGCGCTGCTGGAGAATCCACGGTCTTTTTCTACAAAATGAAAGGGGATTATTATCGGTATTTGGCTGAATTTAAGAGTGGTGAGGATAGGAAAGAAGCTGCCGATCATTCTATGAAAGCATATTTGGCAGCTTCTAGTAAAGCAACGTCAGACTTACCTCCAACACATCCCATCAGACTTGGTCTGGCCTTGAACTTCTCTGTTTTTTACTACGAGATTATGAACTCTCCTGAAAGCTTTTTTTTTTTCAGGGCTTGTCACCTGGCAAAGCAAGCTTTTGATGAAGCAATCTCAGAGTTAGATACTCTAAGCGAGGAGTCCTACAAAGATAGCACACTGATAATGCAGCTTTTGAGAGACAACCTCACTTTGTGGACATCTGACATTCCAGAAGACGGAGGTAACTCAAACAAAAACGAAGGAAATAATTTTTAA | 1224 | 42.89 | MRVDMDCPGCQSKIRKALQKLEGVDVIDIDMDMQKVTVMGWANQEKVLKAVRRTGRTAELWPYPYNSEYQNSIDAYQQSYYDHLPQDQIQTFETVPSSYSYRSRGYSGLNYGYNHQPPYSTLIDEKSEAMFSDENPHACSIIEKKKKIAMASNQERENYVYIAKLAEQAERYDEMVDAMKNVAMLDVELTVEERNLLSVGYKNVVGARRASWRILSSIEQKEETKGNDHNVKRIKDYRQKVESELSTICNDIMVVIDEHLIPSCAAGESTVFFYKMKGDYYRYLAEFKSGEDRKEAADHSMKAYLAASSKATSDLPPTHPIRLGLALNFSVFYYEIMNSPESFFFFRACHLAKQAFDEAISELDTLSEESYKDSTLIMQLLRDNLTLWTSDIPEDGGNSNKNEGNNF | 407 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
11 | 45385981 | 45394422 | - | Bma006832.1 | Bma11g01000 | 91402 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma11g01000 | 407 | Coils | Coil | 162 | 182 | - | - | |
Bma11g01000 | 407 | ProSitePatterns | 14-3-3 proteins signature 2. | 371 | 390 | IPR023409 | - | |
Bma11g01000 | 407 | Pfam | 14-3-3 protein | 163 | 389 | IPR023410 | - | |
Bma11g01000 | 407 | Gene3D | - | 1 | 59 | - | - | |
Bma11g01000 | 407 | ProSiteProfiles | Heavy-metal-associated domain profile. | 5 | 60 | IPR006121 | GO:0046872 | |
Bma11g01000 | 407 | CDD | HMA | 1 | 59 | IPR006121 | GO:0046872 | |
Bma11g01000 | 407 | Gene3D | - | 134 | 401 | IPR036815 | - | |
Bma11g01000 | 407 | Pfam | Heavy-metal-associated domain | 2 | 56 | IPR006121 | GO:0046872 | |
Bma11g01000 | 407 | PRINTS | 14-3-3 protein zeta signature | 362 | 391 | IPR000308 | - | |
Bma11g01000 | 407 | PRINTS | 14-3-3 protein zeta signature | 188 | 217 | IPR000308 | - | |
Bma11g01000 | 407 | PRINTS | 14-3-3 protein zeta signature | 268 | 290 | IPR000308 | - | |
Bma11g01000 | 407 | PRINTS | 14-3-3 protein zeta signature | 303 | 329 | IPR000308 | - | |
Bma11g01000 | 407 | PRINTS | 14-3-3 protein zeta signature | 237 | 261 | IPR000308 | - | |
Bma11g01000 | 407 | SUPERFAMILY | HMA, heavy metal-associated domain | 3 | 62 | IPR036163 | GO:0046872 | |
Bma11g01000 | 407 | PANTHER | 14-3-3 PROTEIN | 153 | 398 | IPR000308 | - | |
Bma11g01000 | 407 | ProSitePatterns | 14-3-3 proteins signature 1. | 194 | 204 | IPR023409 | - | |
Bma11g01000 | 407 | SUPERFAMILY | 14-3-3 protein | 155 | 391 | IPR036815 | - | |
Bma11g01000 | 407 | SMART | 1433_4 | 156 | 402 | IPR023410 | - | |
Bma11g01000 | 407 | PANTHER | 14-3-3 DOMAIN-CONTAINING PROTEIN-RELATED | 153 | 398 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g01394 | Bma-Chr2:56212509 | Bma11g01000 | Bma-Chr11:45385981 | 1.74E-154 | dispersed | |
Bma08g00303 | Bma-Chr8:4288061 | Bma11g01000 | Bma-Chr11:45385981 | 2.97E-26 | dispersed | |
Bma10g01145 | Bma-Chr10:38982569 | Bma11g01000 | Bma-Chr11:45385981 | 7.78E-25 | dispersed | |
Bma11g01000 | Bma-Chr11:45385981 | Bma12g00720 | Bma-Chr12:32286893 | 1.25E-152 | dispersed | |
Bma12g01122 | Bma-Chr12:43496638 | Bma11g01000 | Bma-Chr11:45385981 | 1.02E-25 | dispersed | |
Bma12g00113 | Bma-Chr12:1758067 | Bma11g01000 | Bma-Chr11:45385981 | 1.01E-07 | transposed | |
Bma12g00123 | Bma-Chr12:1842669 | Bma11g01000 | Bma-Chr11:45385981 | 7.38E-08 | transposed | |
Bma11g01000 | Bma-Chr11:45385981 | Bma07g00843 | Bma-Chr7:28407876 | 1.22E-78 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma11g01000 | K06630 | - | csv:101208446 | 428.713 |