Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00007 ATGGCGCGGGGTCATCCTCCCCACCTATCGAAGCCCGGTCTACCCGCGACGGAGGACGACGCTGATCCGACCCGTTTAGCCTCCGTGGCGTTAGGGGCTTCCGTGGGCGGTGGACTCCGGAAGAAGGGAATTGGGGTTAGGGCGTGGCTGCTTTTGGACTCTACCGGTGTTGCGCAGGTCGTGGAGGTGGGCAAGCACGCAATCATGCGCCGGACGGGTTTGCCTGCGCGCGATCTTCGGATTTTGGATCCTTTATTGTCGTATCCTTCAACCATTTTGGGCCGTGAGAGAGCGATTGTGATTAATCTGGAGCATATTAAAGCCATTATCACGGCTCAAGAGGTGCTTCTGTTGAACTCTAGAGACCCCTCGGTGACGCCCTTCGTTGAAGAGCTACAGAGACGGATACTGCGCCACCACCAAGCCATCAAGGCACAAGAGGGTGAGGGCGCTGATTCAAATTGGACTGATATCTATGATTTGGGAGAGGCAAGATCAAGGGCCGTAAGTCCAGAAAATTCATATCAAGGATTTCCACAGTCTCAAGAAGGAAAAGAGGAAGGAAAGGAAGGTGGGAAACAAGGTCTTGATAACCGCGATGGATTAAAGGTTCTCCCATTTGAGTTTGTTGCATTGGAAGCATGCCTTGAATCTACTTGCAGTAACTTAGAGAGCGAAGCTAAGACATTGGAGCAAGAGGCTCACCCAGCTTTGGATAAGCTGACATCCAAGATCAGTACTCTCAATTTGGAACGTGTTCGTCAAATCAAAAGCCGATTGGTTGCAATAACTGGTCGAGTGCAAAAGATGAGGGATGAATTAGAACATTTGCTTGATGACGATGACGATATGGCTGAGATGTATTTGACAGAGAAGTTGGCTCAACAACAACTAGAAAACTCTTCCACATCCTCAATGGATGATGGAAATAACATGGACGATGGAGCTCTTCCCTCAGATATCGACCTCAGGTTACCTTCCGAAATATCAGTAGATGGTGGTGGCATCCCGAGTAATTATGAAAGTGACATCCAGAACAATGAAGAACCTCAACACCCGCTTTTTGGTGGACCTAATGCACTTAGCCATGGAACCCATACGAGCACTACTCATAGTGCTTTAAGCAAACACCTTGATGTGGATGAGCTTGAAATGCTTTTAGAGGCATACTTTGTTCAAATCGATGGTACTTCAAACAAACTATCTACGCTTCGAGAGTATGTGGACGACACAGAAGATTACATAAACATAATGTTGGACGACAAACAGAACCATCTTCTCCAAATGGGAGTTATGTTAACGACAGCAACTCTCGTGGTCAGCGCCTTTGTTGTGGTGGCTGGAATATTTGGCATGAACATACACATCGAGCTCTTCGACCCAGAACTAGCAGGTATGCCTCAATTTCTTTGGACAGTCGGTGGAAGTGCCGCAGGAAGCGTGTTCCTCTATGTGTTTGCCATTGCCTGGTGCAAATACAAACGGTTGCTTGAGTGA 1497 47.9 MARGHPPHLSKPGLPATEDDADPTRLASVALGASVGGGLRKKGIGVRAWLLLDSTGVAQVVEVGKHAIMRRTGLPARDLRILDPLLSYPSTILGRERAIVINLEHIKAIITAQEVLLLNSRDPSVTPFVEELQRRILRHHQAIKAQEGEGADSNWTDIYDLGEARSRAVSPENSYQGFPQSQEGKEEGKEGGKQGLDNRDGLKVLPFEFVALEACLESTCSNLESEAKTLEQEAHPALDKLTSKISTLNLERVRQIKSRLVAITGRVQKMRDELEHLLDDDDDMAEMYLTEKLAQQQLENSSTSSMDDGNNMDDGALPSDIDLRLPSEISVDGGGIPSNYESDIQNNEEPQHPLFGGPNALSHGTHTSTTHSALSKHLDVDELEMLLEAYFVQIDGTSNKLSTLREYVDDTEDYINIMLDDKQNHLLQMGVMLTTATLVVSAFVVVAGIFGMNIHIELFDPELAGMPQFLWTVGGSAAGSVFLYVFAIAWCKYKRLLE 498
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 267972 271541 + Bma006877.1 Bma12g00007 91433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00007 498 Gene3D Magnesium transport protein CorA, transmembrane region 179 426 - -
Bma12g00007 498 Gene3D - 41 120 - -
Bma12g00007 498 PANTHER MAGNESIUM TRANSPORTER MRS2-D-RELATED 32 498 - -
Bma12g00007 498 MobiDBLite consensus disorder prediction 183 197 - -
Bma12g00007 498 MobiDBLite consensus disorder prediction 296 310 - -
Bma12g00007 498 MobiDBLite consensus disorder prediction 330 370 - -
Bma12g00007 498 Pfam CorA-like Mg2+ transporter protein 381 486 IPR002523 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Bma12g00007 498 MobiDBLite consensus disorder prediction 1 21 - -
Bma12g00007 498 Coils Coil 213 233 - -
Bma12g00007 498 MobiDBLite consensus disorder prediction 167 199 - -
Bma12g00007 498 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 32 498 IPR039204 -
Bma12g00007 498 CDD Mrs2_Mfm1p-like 49 496 IPR039204 -
Bma12g00007 498 Coils Coil 129 149 - -
Bma12g00007 498 MobiDBLite consensus disorder prediction 296 317 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma10g00852 Bma-Chr10:15344481 Bma12g00007 Bma-Chr12:267972 1.04E-21 dispersed
Bma12g00007 Bma-Chr12:267972 Bma13g00660 Bma-Chr13:16386481 4.50E-115 dispersed
Bma12g00007 Bma-Chr12:267972 Bma12g00295 Bma-Chr12:4172559 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00007 - - mnt:21394404 707.983