Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00023 ATGGGGAAGGGTCTCTTCTCTTTTCGCCTCACCAACCCCCGTCGTCGCTCTAAAACCAAGCATCACCCTCATCCCTCCCCTCCTTCCTCGCTTCCTGGCCCCACTTCCCCGCCCAACAACGGCCTTATTGCTGCCGCCGCTGCTGCTGCTGGGGCGGCAGCAGCCAAGGGGAAGAAGAAGGCTGGTGGACCTAGGCTGTGGATGCGTTTTGACCGATGGGGCCGCTCTGAGCTGGTAGAGTGCGATAAGAGCGCCATTATCCGGCTTGCTGGAATTCCTGCCCGGGATTTGAGAATCCTTGGCCCTGTTTTCTCTCAATCGTCCAATATTCTTGGCAGAGAGAAGGCCATGGTTGTTAACTTAGAGTTCATAAAGGCAATAGTTACTGCAGAAGAAGTGCTTTTACTTGAGCCCCTTCGTCAGGAGGTTCTTCCATTTGTGGATCAGCTAAGACTGCAACTTCCTCAGAAAAGTCCATCTAGGACCCACGGAACTGAAACTTTGGATGAACAAGAGAATGATGTGCATGTTTTGACGGGTAGGCAATGGTTACCTGTCTCGGAAACAGCTGAAGCTTTGAACAGTGAGCTCCCATTTGAGTTTCAGGTTCTGGAAATTGCATTAGAGGTTGTTTGTTTATACTTAGACTCAAGGGTAGCAGAGCTTGAGAGAGATGCATACCCTATTCTTGATGAACTGGCTAGGAGTGTCAGCACCAAAAATCTTGAACACGTGAGAAGTTTGAAAAGCAATCTTACTCGTCTACTTGCACGCGTGCAAAAGGTGAGGGATGAAATCGAACATCTATTGGATGACAATGAAGACATGGCGCATTTATATTTAACAAGGAAGTGGATGCAGAATCAACAATCCATGGCTTTGTTGGGCGGTGTAACTTCCAATAGTTTATCTGCTCCTTCCTTCCGTCTTCATCGACTTAATTCTACACGGAGCGGCAGTTTGGCGACTAGCAACCATTTGGAAGATAATGATGTAGAAGATCTTGAGATGTTGCTGGAGGCATATTTTATGCAGTTGGATGGAACTCGCAACAAGATACTATCGGTTCGGGAGTACATAGATGACACAGAGGACTACGTGAACATTCAACTGGACAACCAGCGAAATGAGCTTATTCAACTTCAGTTGATACTGACCATCGCATCATTTGCCGTAGCAATGGAAACTTGGATATCTGGACTGTTTGGAATGAACATCCCCTGTACACTCTACAACATCGATGGGATATTTTTGTACTCTGTGGAAGCTATGACGGCATTTTGTGTCTTACTATTCCTGTTTATTTTAGGATATGCAAGATGGAAGAAGCTACTTGGTTCCTAA 1344 46.5 MGKGLFSFRLTNPRRRSKTKHHPHPSPPSSLPGPTSPPNNGLIAAAAAAAGAAAAKGKKKAGGPRLWMRFDRWGRSELVECDKSAIIRLAGIPARDLRILGPVFSQSSNILGREKAMVVNLEFIKAIVTAEEVLLLEPLRQEVLPFVDQLRLQLPQKSPSRTHGTETLDEQENDVHVLTGRQWLPVSETAEALNSELPFEFQVLEIALEVVCLYLDSRVAELERDAYPILDELARSVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNEDMAHLYLTRKWMQNQQSMALLGGVTSNSLSAPSFRLHRLNSTRSGSLATSNHLEDNDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDYVNIQLDNQRNELIQLQLILTIASFAVAMETWISGLFGMNIPCTLYNIDGIFLYSVEAMTAFCVLLFLFILGYARWKKLLGS 447
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 735368 737798 + Bma006898.1 Bma12g00023 91449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00023 447 CDD Mrs2_Mfm1p-like 67 444 IPR039204 -
Bma12g00023 447 MobiDBLite consensus disorder prediction 1 41 - -
Bma12g00023 447 Coils Coil 245 272 - -
Bma12g00023 447 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 6 447 IPR039204 -
Bma12g00023 447 PANTHER MAGNESIUM TRANSPORTER MRS2-4-RELATED 6 447 - -
Bma12g00023 447 Gene3D - 56 138 - -
Bma12g00023 447 Gene3D Magnesium transport protein CorA, transmembrane region 144 378 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00739 Bma-Chr6:38397233 Bma12g00023 Bma-Chr12:735368 1.23E-83 dispersed
Bma07g01468 Bma-Chr7:50336108 Bma12g00023 Bma-Chr12:735368 2.22E-18 dispersed
Bma12g00023 Bma-Chr12:735368 Bma12g00295 Bma-Chr12:4172559 2.11E-48 dispersed
Bma12g00023 Bma-Chr12:735368 Bma13g00660 Bma-Chr13:16386481 2.11E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00023 K16075 - zju:107415174 621.698