Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00041 ATGGCGATCAACTACGAGAAAGAGGAGGTAGTTTGCGTTACCGGTGCCAACGGCTTCATCGGGTCATGGATTGTTAGAACGCTTTTGGAAGACGGCTACGCCAACATTCACGCCTCCATCTTCCCTGGTTCAGACCCTTCGCATCTTTTCACTCTCAGAGATTCTGTCTACTCCGCTGCCAAACTGACTGTGTTTCAGGCCGATTTACTGGACGCCGGCGCGTTTGTTAGAGCGGTGGACGGCTGCGTAGGGGTCTTTCACGTCGCCTCACCCTGCACGCTCGAGGAGCCTAAGAATCCTCATACTGAGCTTGTGATGCCTGCCGTTCAAGGAACCCTAAATGTGCTCGACGCAAGCAGGCGAGCCGGGGTTCGGCGCGTGGTTTTAACCTCCTCTATCTCGGCTCTGGTTCCCAATCCCTCATGGCCATCTCATATACCTTTCGATGAGACTTCCTGGACCGACCTCCATTATTGCGAATCTCGTCAGAAATGGTATCCAGTGTCAAAGACCCTGGCAGAAAAGGCAGCGTGGGAATTTGCAGAGAAGCATAAAATGGATGTCGTCTCGATCCTTCCATCGACCTGTCTTGGCCCACTCTTGCAGCCGGGATTGAATGCGAGTTGTGCCGTGTTGAAGAACTTGCTGCAGGGCTCGAAAGATAGTCAAGAATATCACTGGTTGGGGGCTGTTCATGTCAAAGATGTAGCCAAAGCCCAGGTTTTGTTGTTCCAAACTCCTTCTGCTTCCGGTAGATATCTTTGCACAAACGGCATTTATCAGTTCTCCCATTTTGCCGACAGAGTCTCCAAGCTCTTTCCTGAGTTCCCTGTTCACAGTTTTAAAGGCGAGACCCAACCGGGACTAATGCCATGCGAAGAGGCTGCCAAAAGATTAATTAATCTCGGATTGTCTTTTACTCCGATTGAAGATGCTGTCCGAGAGACGGTGGAGAGTCTCAGAAACAGAAGGTTCCTA 978 50.92 MAINYEKEEVVCVTGANGFIGSWIVRTLLEDGYANIHASIFPGSDPSHLFTLRDSVYSAAKLTVFQADLLDAGAFVRAVDGCVGVFHVASPCTLEEPKNPHTELVMPAVQGTLNVLDASRRAGVRRVVLTSSISALVPNPSWPSHIPFDETSWTDLHYCESRQKWYPVSKTLAEKAAWEFAEKHKMDVVSILPSTCLGPLLQPGLNASCAVLKNLLQGSKDSQEYHWLGAVHVKDVAKAQVLLFQTPSASGRYLCTNGIYQFSHFADRVSKLFPEFPVHSFKGETQPGLMPCEEAAKRLINLGLSFTPIEDAVRETVESLRNRRFL 326
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 961488 963415 + Bma030486 Bma12g00041 91467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00041 326 CDD FR_SDR_e 11 304 - -
Bma12g00041 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 9 316 - -
Bma12g00041 326 Gene3D - 2 326 - -
Bma12g00041 326 PANTHER CINNAMOYL-COA REDUCTASE-LIKE PROTEIN 9 316 - -
Bma12g00041 326 Pfam NAD dependent epimerase/dehydratase family 11 249 IPR001509 -
Bma12g00041 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 8 321 IPR036291 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g01579 Bma-Chr7:51119707 Bma12g00041 Bma-Chr12:961488 7.33E-77 dispersed
Bma12g00041 Bma-Chr12:961488 Bma13g00671 Bma-Chr13:17026197 6.12E-74 dispersed
Bma12g00041 Bma-Chr12:961488 Bma14g00556 Bma-Chr14:5985010 6.24E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00041 - - vvi:100245372 504.982