Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00043 ATGACGAAATTACAGGCCTTGAAGGCCTTTCTTTCTCTGCTCTACAGAATTCTAGTTGGGTGTGATTTCTTTGGTGCTATACCTGATGCTATTGGATCTCTGCAAAAGCTGGTTTTTCTATCTTTGAATTCAAATCGGTTCAGCGGACCAATCCCACCTTCGATAGGCAATCTAACCAATCTCTACTGGCTAGACCTGGCTGAGAACCAGCTTGAAGGTCCACTTCCAGTTTCAAATGGCAGCACACCAGGCCTAGATATGCTACATCATGCTAAGCACTTCCATCTCGGAAGGAATAACCTCTCCGGTTCGATTCCGTCGCATCTTTTTAGCGCAAACATGAAACTGATACATATTCTTTTGGACGGCAATAACCTGACCGGAACCATCCCTCCGACTCTAGGACTCGTTACCTCCCTAGAAGTAGTACGCCTTGATGGAAATATGTTGAGTGGAACAGTGCCTTCTACCCTCAACAGTCTTACTACCCTCAATGACCTATTGCTGTCCAACAACCGATTAACCGGACCAATTCCAGATCTAAGCAACCTCACCGTCCTTACCACTCTGGACTTAAGCAATAACACTTTCGACAAATCCGATATACCTCCTTGGTTTTCGACATTAAAGTCATTGACAACATTGATGATGCAAAATACGGGACTCCGAGGCCAACTTCCTTCGGCTTTATTCAGCCTTCCTAATTTGCAGACTGTAGTATTCAGCAACAACAACGTTAACGGCACCTTAAATCTTGGCCCCACCTTCAGCAACCACCTGCAACTTATCGATCTGCGTGGCAACCGGATAACTGAGGTTGATGATGATCACGGCTACAGATCTTCGTTGATACTTGTTGGTAATCCAGTTTGTCTGGAAGATAGTTCAAAGTATCCTTACTGCTCCATTCCAACCGACAACTCCTCGAGATATTCGACGCCAACGAGTAACTGCTCGCCGTCTCCATGCAGCTCGAATGAGATTTCAAGCCCCAACTGTATATGTGCACACCCATTTACGGGCACTCTTGTCTTCAGAGCTCCTTCCTTTTCAAACTTGCAGAATTCGAGCCTGTTTGCCGATCTTCATGATCACTTAATGGCATCTTTTCGATCCACCAACGTTCCCGTGAATTCTGTTTCTCTGTCCCATCCAGCCTTTGATGAGGCCAAGTACCTTAATATAAACTTAGCAGTCTTTCCGACCGACTACGATCGTTTCAACCGGACCGGAATTTTAAGCGTTGGTTTTGTTCTCAGCAACCAGACTTTCAAGCCTCCAGATTATTATGGACCTTTCTATTTTATGGCAGAGCCTTATCAGTACTTTGGAGAAACAGATGAATCAAGAAAGTCATCCTTATTAAACACTGGTGTCATAATTGGAGTAGCTGTTGGTGGGTCTCTCCTGTTACTACTTTTAGTCGTGGCTGCGGCTTGTGCCATTCGCCACAAGAAAAGAGCAACCAAAGCTGCCGGACAGAAGAATCCTTTTGCGGAGTGGGATTCGAAGAAGAGAAGTGGCGATGTACCGCAATTAAAGGGTGCAAGATGGTTCTCTTTCGAGGAGCTGAAGAAGAGCACCGATAATTTTTCGGAAACTAACGAAATCGGAGCCGGGGGCTATGGGAAGGTTTACCGGGGAATTCTACCGAAAGGGGAACTGATTGCCATAAAAAGAGCTAAAAAGGGATCTATGCAAGGGGGGCTTGAGTTCAAAACTGAAATTGAGCTTCTGTCCAGGGTTCATCACAGAAATCTTGTCACTCTCTTGGGTTTTTGTTTTGAGCAAGGTGAACAGATGCTGGTCTATGAGTATGTTCCAAATGGTAATTTGAGGGATACTCTATCAGGGAAGACAGGAATAAGGTTGGAATGGATGAGGAGGCTCAAAATAGCGTTGGGTGCGGCCAGAGGTGTGTCGTATCTACACGAACTTGCAAACCCACCGATCATACACAGGGACATTAAATCAAACAACATTTTATTGGATGACAAACTTAATGCAAAAGTAGCCGATTTTGGTCTCTCCAAGCTCATGCCCGACTGCGACGTCAACCATGTCACGACACAAGTTAAAGGAACAATGGGGTACATGGATCCGGAATACTACACGACACAACAACTGACCGAGAAGAGCGATGTGTATGGTTTTGGGGTGCTTATGTTAGAGTTAATAACTGCAAGAAAGCCGATAGAACGAGGAAAGTACATCGTGAGGGAGGTTGAAAATGCGATGGACAAAACGAAACCTCTTTATAACCTCGAAGAAATTCTCGATCTGACCATCACTTCATCAGCATTGCAAGGTTTGGAGAAGTTTGTGGATCTAGCCTTCAGATGTGTTGAAGAAACAGGAGCTAACCGGCCAACAATGGGAGAAGTGGTGAAAGAGATAGAGAATATTACGGTGATTGCTGGTTTGAATCCGAATGCAGAATCTACTTCAACTTCTGCAAGTTACGAGGACGCAGGTACCGAGACGGGTCATCATCCTTACAGCAACCGTGAATTCGGTTTTACTGGTGGATCTCCGCGCGTCTAA 2544 45.17 MTKLQALKAFLSLLYRILVGCDFFGAIPDAIGSLQKLVFLSLNSNRFSGPIPPSIGNLTNLYWLDLAENQLEGPLPVSNGSTPGLDMLHHAKHFHLGRNNLSGSIPSHLFSANMKLIHILLDGNNLTGTIPPTLGLVTSLEVVRLDGNMLSGTVPSTLNSLTTLNDLLLSNNRLTGPIPDLSNLTVLTTLDLSNNTFDKSDIPPWFSTLKSLTTLMMQNTGLRGQLPSALFSLPNLQTVVFSNNNVNGTLNLGPTFSNHLQLIDLRGNRITEVDDDHGYRSSLILVGNPVCLEDSSKYPYCSIPTDNSSRYSTPTSNCSPSPCSSNEISSPNCICAHPFTGTLVFRAPSFSNLQNSSLFADLHDHLMASFRSTNVPVNSVSLSHPAFDEAKYLNINLAVFPTDYDRFNRTGILSVGFVLSNQTFKPPDYYGPFYFMAEPYQYFGETDESRKSSLLNTGVIIGVAVGGSLLLLLLVVAAACAIRHKKRATKAAGQKNPFAEWDSKKRSGDVPQLKGARWFSFEELKKSTDNFSETNEIGAGGYGKVYRGILPKGELIAIKRAKKGSMQGGLEFKTEIELLSRVHHRNLVTLLGFCFEQGEQMLVYEYVPNGNLRDTLSGKTGIRLEWMRRLKIALGAARGVSYLHELANPPIIHRDIKSNNILLDDKLNAKVADFGLSKLMPDCDVNHVTTQVKGTMGYMDPEYYTTQQLTEKSDVYGFGVLMLELITARKPIERGKYIVREVENAMDKTKPLYNLEEILDLTITSSALQGLEKFVDLAFRCVEETGANRPTMGEVVKEIENITVIAGLNPNAESTSTSASYEDAGTETGHHPYSNREFGFTGGSPRV 847
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 966690 971016 - Bma006914.4 Bma12g00043 91469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00043 847 ProSiteProfiles Leucine-rich repeat profile. 163 185 IPR001611 GO:0005515
Bma12g00043 847 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 7 838 - -
Bma12g00043 847 MobiDBLite consensus disorder prediction 813 847 - -
Bma12g00043 847 ProSiteProfiles Protein kinase domain profile. 531 804 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00043 847 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 7 838 - -
Bma12g00043 847 Pfam Protein tyrosine and serine/threonine kinase 534 798 IPR001245 GO:0004672|GO:0006468
Bma12g00043 847 Gene3D Transferase(Phosphotransferase) domain 1 607 817 - -
Bma12g00043 847 Gene3D Phosphorylase Kinase; domain 1 501 606 - -
Bma12g00043 847 Gene3D Ribonuclease Inhibitor 180 321 IPR032675 -
Bma12g00043 847 SMART serkin_6 531 805 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00043 847 ProSitePatterns Serine/Threonine protein kinases active-site signature. 651 663 IPR008271 GO:0004672|GO:0006468
Bma12g00043 847 Gene3D Ribonuclease Inhibitor 2 179 IPR032675 -
Bma12g00043 847 CDD STKc_IRAK 537 802 - -
Bma12g00043 847 SUPERFAMILY Protein kinase-like (PK-like) 517 815 IPR011009 -
Bma12g00043 847 SUPERFAMILY L domain-like 18 271 - -
Bma12g00043 847 ProSitePatterns Protein kinases ATP-binding region signature. 537 563 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00909 Bma12g00043 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00605 Bma-Chr2:13827397 Bma12g00043 Bma-Chr12:966690 4.58E-54 dispersed
Bma04g01239 Bma-Chr4:36567348 Bma12g00043 Bma-Chr12:966690 3.99E-09 dispersed
Bma12g00043 Bma-Chr12:966690 Bma15g01094 Bma-Chr15:43526502 4.62E-10 dispersed
Bma02g00884 Bma-Chr2:47319948 Bma12g00043 Bma-Chr12:966690 2.08E-60 transposed
Bma03g01561 Bma-Chr3:51976003 Bma12g00043 Bma-Chr12:966690 1.03E-101 transposed
Bma12g00043 Bma-Chr12:966690 Bma05g00909 Bma-Chr5:46955063 6.74E-07 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66802 PF07714 PK_Tyr_Ser-Thr 5.70E-47 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00043 - - jre:109001825 1022.69