Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00043 | ATGACGAAATTACAGGCCTTGAAGGCCTTTCTTTCTCTGCTCTACAGAATTCTAGTTGGGTGTGATTTCTTTGGTGCTATACCTGATGCTATTGGATCTCTGCAAAAGCTGGTTTTTCTATCTTTGAATTCAAATCGGTTCAGCGGACCAATCCCACCTTCGATAGGCAATCTAACCAATCTCTACTGGCTAGACCTGGCTGAGAACCAGCTTGAAGGTCCACTTCCAGTTTCAAATGGCAGCACACCAGGCCTAGATATGCTACATCATGCTAAGCACTTCCATCTCGGAAGGAATAACCTCTCCGGTTCGATTCCGTCGCATCTTTTTAGCGCAAACATGAAACTGATACATATTCTTTTGGACGGCAATAACCTGACCGGAACCATCCCTCCGACTCTAGGACTCGTTACCTCCCTAGAAGTAGTACGCCTTGATGGAAATATGTTGAGTGGAACAGTGCCTTCTACCCTCAACAGTCTTACTACCCTCAATGACCTATTGCTGTCCAACAACCGATTAACCGGACCAATTCCAGATCTAAGCAACCTCACCGTCCTTACCACTCTGGACTTAAGCAATAACACTTTCGACAAATCCGATATACCTCCTTGGTTTTCGACATTAAAGTCATTGACAACATTGATGATGCAAAATACGGGACTCCGAGGCCAACTTCCTTCGGCTTTATTCAGCCTTCCTAATTTGCAGACTGTAGTATTCAGCAACAACAACGTTAACGGCACCTTAAATCTTGGCCCCACCTTCAGCAACCACCTGCAACTTATCGATCTGCGTGGCAACCGGATAACTGAGGTTGATGATGATCACGGCTACAGATCTTCGTTGATACTTGTTGGTAATCCAGTTTGTCTGGAAGATAGTTCAAAGTATCCTTACTGCTCCATTCCAACCGACAACTCCTCGAGATATTCGACGCCAACGAGTAACTGCTCGCCGTCTCCATGCAGCTCGAATGAGATTTCAAGCCCCAACTGTATATGTGCACACCCATTTACGGGCACTCTTGTCTTCAGAGCTCCTTCCTTTTCAAACTTGCAGAATTCGAGCCTGTTTGCCGATCTTCATGATCACTTAATGGCATCTTTTCGATCCACCAACGTTCCCGTGAATTCTGTTTCTCTGTCCCATCCAGCCTTTGATGAGGCCAAGTACCTTAATATAAACTTAGCAGTCTTTCCGACCGACTACGATCGTTTCAACCGGACCGGAATTTTAAGCGTTGGTTTTGTTCTCAGCAACCAGACTTTCAAGCCTCCAGATTATTATGGACCTTTCTATTTTATGGCAGAGCCTTATCAGTACTTTGGAGAAACAGATGAATCAAGAAAGTCATCCTTATTAAACACTGGTGTCATAATTGGAGTAGCTGTTGGTGGGTCTCTCCTGTTACTACTTTTAGTCGTGGCTGCGGCTTGTGCCATTCGCCACAAGAAAAGAGCAACCAAAGCTGCCGGACAGAAGAATCCTTTTGCGGAGTGGGATTCGAAGAAGAGAAGTGGCGATGTACCGCAATTAAAGGGTGCAAGATGGTTCTCTTTCGAGGAGCTGAAGAAGAGCACCGATAATTTTTCGGAAACTAACGAAATCGGAGCCGGGGGCTATGGGAAGGTTTACCGGGGAATTCTACCGAAAGGGGAACTGATTGCCATAAAAAGAGCTAAAAAGGGATCTATGCAAGGGGGGCTTGAGTTCAAAACTGAAATTGAGCTTCTGTCCAGGGTTCATCACAGAAATCTTGTCACTCTCTTGGGTTTTTGTTTTGAGCAAGGTGAACAGATGCTGGTCTATGAGTATGTTCCAAATGGTAATTTGAGGGATACTCTATCAGGGAAGACAGGAATAAGGTTGGAATGGATGAGGAGGCTCAAAATAGCGTTGGGTGCGGCCAGAGGTGTGTCGTATCTACACGAACTTGCAAACCCACCGATCATACACAGGGACATTAAATCAAACAACATTTTATTGGATGACAAACTTAATGCAAAAGTAGCCGATTTTGGTCTCTCCAAGCTCATGCCCGACTGCGACGTCAACCATGTCACGACACAAGTTAAAGGAACAATGGGGTACATGGATCCGGAATACTACACGACACAACAACTGACCGAGAAGAGCGATGTGTATGGTTTTGGGGTGCTTATGTTAGAGTTAATAACTGCAAGAAAGCCGATAGAACGAGGAAAGTACATCGTGAGGGAGGTTGAAAATGCGATGGACAAAACGAAACCTCTTTATAACCTCGAAGAAATTCTCGATCTGACCATCACTTCATCAGCATTGCAAGGTTTGGAGAAGTTTGTGGATCTAGCCTTCAGATGTGTTGAAGAAACAGGAGCTAACCGGCCAACAATGGGAGAAGTGGTGAAAGAGATAGAGAATATTACGGTGATTGCTGGTTTGAATCCGAATGCAGAATCTACTTCAACTTCTGCAAGTTACGAGGACGCAGGTACCGAGACGGGTCATCATCCTTACAGCAACCGTGAATTCGGTTTTACTGGTGGATCTCCGCGCGTCTAA | 2544 | 45.17 | MTKLQALKAFLSLLYRILVGCDFFGAIPDAIGSLQKLVFLSLNSNRFSGPIPPSIGNLTNLYWLDLAENQLEGPLPVSNGSTPGLDMLHHAKHFHLGRNNLSGSIPSHLFSANMKLIHILLDGNNLTGTIPPTLGLVTSLEVVRLDGNMLSGTVPSTLNSLTTLNDLLLSNNRLTGPIPDLSNLTVLTTLDLSNNTFDKSDIPPWFSTLKSLTTLMMQNTGLRGQLPSALFSLPNLQTVVFSNNNVNGTLNLGPTFSNHLQLIDLRGNRITEVDDDHGYRSSLILVGNPVCLEDSSKYPYCSIPTDNSSRYSTPTSNCSPSPCSSNEISSPNCICAHPFTGTLVFRAPSFSNLQNSSLFADLHDHLMASFRSTNVPVNSVSLSHPAFDEAKYLNINLAVFPTDYDRFNRTGILSVGFVLSNQTFKPPDYYGPFYFMAEPYQYFGETDESRKSSLLNTGVIIGVAVGGSLLLLLLVVAAACAIRHKKRATKAAGQKNPFAEWDSKKRSGDVPQLKGARWFSFEELKKSTDNFSETNEIGAGGYGKVYRGILPKGELIAIKRAKKGSMQGGLEFKTEIELLSRVHHRNLVTLLGFCFEQGEQMLVYEYVPNGNLRDTLSGKTGIRLEWMRRLKIALGAARGVSYLHELANPPIIHRDIKSNNILLDDKLNAKVADFGLSKLMPDCDVNHVTTQVKGTMGYMDPEYYTTQQLTEKSDVYGFGVLMLELITARKPIERGKYIVREVENAMDKTKPLYNLEEILDLTITSSALQGLEKFVDLAFRCVEETGANRPTMGEVVKEIENITVIAGLNPNAESTSTSASYEDAGTETGHHPYSNREFGFTGGSPRV | 847 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 966690 | 971016 | - | Bma006914.4 | Bma12g00043 | 91469 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00043 | 847 | ProSiteProfiles | Leucine-rich repeat profile. | 163 | 185 | IPR001611 | GO:0005515 | |
Bma12g00043 | 847 | PANTHER | LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED | 7 | 838 | - | - | |
Bma12g00043 | 847 | MobiDBLite | consensus disorder prediction | 813 | 847 | - | - | |
Bma12g00043 | 847 | ProSiteProfiles | Protein kinase domain profile. | 531 | 804 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00043 | 847 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED | 7 | 838 | - | - | |
Bma12g00043 | 847 | Pfam | Protein tyrosine and serine/threonine kinase | 534 | 798 | IPR001245 | GO:0004672|GO:0006468 | |
Bma12g00043 | 847 | Gene3D | Transferase(Phosphotransferase) domain 1 | 607 | 817 | - | - | |
Bma12g00043 | 847 | Gene3D | Phosphorylase Kinase; domain 1 | 501 | 606 | - | - | |
Bma12g00043 | 847 | Gene3D | Ribonuclease Inhibitor | 180 | 321 | IPR032675 | - | |
Bma12g00043 | 847 | SMART | serkin_6 | 531 | 805 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Bma12g00043 | 847 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 651 | 663 | IPR008271 | GO:0004672|GO:0006468 | |
Bma12g00043 | 847 | Gene3D | Ribonuclease Inhibitor | 2 | 179 | IPR032675 | - | |
Bma12g00043 | 847 | CDD | STKc_IRAK | 537 | 802 | - | - | |
Bma12g00043 | 847 | SUPERFAMILY | Protein kinase-like (PK-like) | 517 | 815 | IPR011009 | - | |
Bma12g00043 | 847 | SUPERFAMILY | L domain-like | 18 | 271 | - | - | |
Bma12g00043 | 847 | ProSitePatterns | Protein kinases ATP-binding region signature. | 537 | 563 | IPR017441 | GO:0005524 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma05g00909 | Bma12g00043 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma02g00605 | Bma-Chr2:13827397 | Bma12g00043 | Bma-Chr12:966690 | 4.58E-54 | dispersed | |
Bma04g01239 | Bma-Chr4:36567348 | Bma12g00043 | Bma-Chr12:966690 | 3.99E-09 | dispersed | |
Bma12g00043 | Bma-Chr12:966690 | Bma15g01094 | Bma-Chr15:43526502 | 4.62E-10 | dispersed | |
Bma02g00884 | Bma-Chr2:47319948 | Bma12g00043 | Bma-Chr12:966690 | 2.08E-60 | transposed | |
Bma03g01561 | Bma-Chr3:51976003 | Bma12g00043 | Bma-Chr12:966690 | 1.03E-101 | transposed | |
Bma12g00043 | Bma-Chr12:966690 | Bma05g00909 | Bma-Chr5:46955063 | 6.74E-07 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
66802 | PF07714 | PK_Tyr_Ser-Thr | 5.70E-47 | CL0016 | Bma | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00043 | - | - | jre:109001825 | 1022.69 |