Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00045 ATGGATATATCAACAGTGCTGATGATCTTATCAGCCATCGTGGCTTATTTAATTTGGTTCAAAATGATGGCCAGGTCTCTGAGTGGTCCTCGTGTCTGGCCAGTAGTGGGCAGCCTCCCCGGACTCATCAGCCACGTCAGTTCCATGCATGATTGGATTGCAGACAATCTTCGAGCATGTGGCGGCACGTACCAAACTTGCACGTGCGCGGTCCCGTTCTTGGCTCGTAAACAAGGCCACGTGACTGTCACGTGCGATCCACAAAATTTGGAGCATATATTAAAGACCAGATTTGACAATTACCCGAAAGGTCCCAATTGGCAGGCTGTCTTCCATGACTTACTTGGAGATGGGATCTTCAACTCAGATGGTGACACGTGGCTCTTCCAGCGTAAGACTGCCGCGTTGGAATTCACCACCCGAACGCTCCGTCAGGCGATGGCCCGATGGGTGAGCCGAGCTATCAAGCTTAGATTTTGCCCGATTCTAGAGACGACTCAGCGGGAGAAAAAGTCGATTGATCTTCAGGATCTCTTGCTCCGTCTCACATTCGACAACATATGTGGTTTGACATTCGGGAGGGACCCAGAAACCCTGTCTCCGAGACTAGCAGAAAATGGCTTTGCTTCGGCTTTCGACCGAGCCACTGAGGCCTCGCTACGACGTATGATATTGCCAGAAGTCGTATGGAAGCTCAAGAAACGGCTCGGCTTGGGAATGGAAGTAGTGTTGAGCCAAAGTCTTAAGCAGATCGATCAGTATCTGACGAATATCATACAAGCACGTAAGCTTGAATTGCTGACTCAGCAGCAAGGTGGCAGTGGGACCCCACACGATGACCTCTTATCGAGGTTCATGAAGAAAAAAGAGTCTTACTCCGACACCTTCCTCCAACACGTGGCACTCAATTTCATCCTAGCTGGCCGTGACACTTCCTCCGTGGCATTGAGCTGGTTTTTCTGGTTAGTGACTCAAAATCCAAGGGTTGAAGCAAAAATCCTCTCAGAAATTTGTACTGTCCTGATGGAGACACGTGGCAATGACCAATCAAAGTGGGTGGAGGACCCTCTGGTATTTGAGGAGCTTGATCGATTGATATACCTCAAGGCAGCACTTTCAGAGACTCTAAGACTCTACCCTTCCGTCCCAGAAGATTCGAAACACGTAATCAACGACGACGTTTTACCGAGCGGGGCATTCGTCCCAGCAGGTTCATCGATTACATATTCAATATATTCGGCTGGTCGTATGAAATTCATATGGGGTAATGACTTCCTTGAATTCAAACCCGAGAGGTGGTTATCCGAAGACGGCAAGAAAATGGACGTGAAAGACTCGTTTAGGTTCGTTTCCTTCAACGCTGGTCCGAGAATCTGTCTGGGAAAAGACTTGGCTTATTTGCAGATGAAGTCGATCGCATCGGCCGTCCTGCTCCGACATCGGCTCACGATCACCCCCGGCCATCGAGTGGAGCAAAAGATGTCGCTAACATTATTCATGAAGTATGGTCTTGTGGTTAATGTGCACCCAAGGGATCTTAGTCTTGTGGTGGACCAAATAAGGAGAAGTAGGTCATCGGATAAATGA 1587 48.83 MDISTVLMILSAIVAYLIWFKMMARSLSGPRVWPVVGSLPGLISHVSSMHDWIADNLRACGGTYQTCTCAVPFLARKQGHVTVTCDPQNLEHILKTRFDNYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKLRFCPILETTQREKKSIDLQDLLLRLTFDNICGLTFGRDPETLSPRLAENGFASAFDRATEASLRRMILPEVVWKLKKRLGLGMEVVLSQSLKQIDQYLTNIIQARKLELLTQQQGGSGTPHDDLLSRFMKKKESYSDTFLQHVALNFILAGRDTSSVALSWFFWLVTQNPRVEAKILSEICTVLMETRGNDQSKWVEDPLVFEELDRLIYLKAALSETLRLYPSVPEDSKHVINDDVLPSGAFVPAGSSITYSIYSAGRMKFIWGNDFLEFKPERWLSEDGKKMDVKDSFRFVSFNAGPRICLGKDLAYLQMKSIASAVLLRHRLTITPGHRVEQKMSLTLFMKYGLVVNVHPRDLSLVVDQIRRSRSSDK 528
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1011392 1012978 + Bma006917.1 Bma12g00045 91471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00045 528 Gene3D Cytochrome P450 22 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PANTHER CYTOCHROME P450 86A7 3 514 - -
Bma12g00045 528 PRINTS P450 superfamily signature 370 381 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS P450 superfamily signature 307 324 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS P450 superfamily signature 459 470 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS P450 superfamily signature 450 459 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PANTHER CYTOCHROME P450 3 514 - -
Bma12g00045 528 PRINTS E-class P450 group I signature 296 313 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS E-class P450 group I signature 369 387 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS E-class P450 group I signature 316 342 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS E-class P450 group I signature 459 482 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 PRINTS E-class P450 group I signature 449 459 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 Pfam Cytochrome P450 28 497 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00045 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 452 461 IPR017972 GO:0005506|GO:0016705
Bma12g00045 528 SUPERFAMILY Cytochrome P450 21 511 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g01177 Bma-Chr5:50915959 Bma12g00045 Bma-Chr12:1011392 0 dispersed
Bma12g00045 Bma-Chr12:1011392 Bma12g00063 Bma-Chr12:1196196 0 dispersed
Bma12g00045 Bma-Chr12:1011392 Bma09g00314 Bma-Chr9:26706233 1.45E-109 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00045 K15398 K20544 qsu:111988103 880.552