Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00052 ATGAACGACGCAGATGTATCTAAGCAGATCCAGCAGATGGTGAGGTTTATCCGCCAGGAAGCGGAGGAAAAAGCGAACGAGATCTCTGTTTCTGCCGAAGAAGAATTCAACATCGAGAAGTTGCAGCTGGTTGAGGCAGAAAAGAAGAAGATCAGACAAGAGTACGAGAAAAAGGAGAAGCAAGTCGACGTTCGGAAAAAGATTGAGTATTCCATGCAGCTTAATGCTTCTAGAATTAAAGTTCTCCAAGCCCAAGATGATGTCGTCAACTCCATGAAAGAAGCAGCATCAAAGGAACTTCTAAGCATCTGCCGTGATCAGCATGGATACAAAAATCTCTTGAAAGATCTCATAGTTCAGAGCTTGCTTCGACTGAAAGAGCCAGCTGTATTGCTGCGATGTCGGGAAGATGACCTTCAATTGGTTGAGAATGTGCTACAATCTGCAGCGAAGGAATATGCTCAAAAAGCAAGTGTTCATCCTCCCGAAATTATAGTTGACACTCGTGTTTTTCTACCACCTGCTCCAACCCACTACGATGCTCATGGTCCATATTGCTCTGGAGGTGTGGTGCTGGCATCTCGAGATGGAAAGATTGTTTGTGAGAACACCCTTGACGCAAGGTTGGATGTTGCATTTCGTAAAAAACTTCCAGAGATCCGTAAGAAGCTCTTTGGATAA 681 44.35 MNDADVSKQIQQMVRFIRQEAEEKANEISVSAEEEFNIEKLQLVEAEKKKIRQEYEKKEKQVDVRKKIEYSMQLNASRIKVLQAQDDVVNSMKEAASKELLSICRDQHGYKNLLKDLIVQSLLRLKEPAVLLRCREDDLQLVENVLQSAAKEYAQKASVHPPEIIVDTRVFLPPAPTHYDAHGPYCSGGVVLASRDGKIVCENTLDARLDVAFRKKLPEIRKKLFG 226
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
12 1081180 1084007 + Bma006923.1 Bma12g00052 91478
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00052 226 Gene3D - 1 62 - -
Bma12g00052 226 PANTHER BNAC03G72900D PROTEIN 1 219 - -
Bma12g00052 226 SUPERFAMILY V-type ATPase subunit E-like 87 226 - -
Bma12g00052 226 Coils Coil 38 61 - -
Bma12g00052 226 Hamap V-type proton ATPase subunit E [atpE]. 8 226 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma12g00052 226 Pfam ATP synthase (E/31 kDa) subunit 16 225 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma12g00052 226 PANTHER ATPASE H+-TRANSPORTING V1 SUBUNIT E1A-RELATED 1 219 IPR002842 GO:0033178|GO:0046961|GO:1902600
Bma12g00052 226 Gene3D - 92 226 IPR038495 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00052 Bma-Chr12:1081180 Bma12g00600 Bma-Chr12:27319223 1.92E-160 wgd
Bma12g00052 Bma-Chr12:1081180 Bma05g00848 Bma-Chr5:46031662 1.55E-145 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00052 K02150 - nnu:104593422 387.497