Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00057 ATGGGTGTCGCGCTTTCGATTACAGCCTTTCCTGTATTGGCTCGGATTCTCGCCGAACTGAAGCTTTTAACGACCAATATCGGTAGGATGGCAATGTCGGCGGCGGCGGTCAACGATGTGGCGGCTTGGATTCTTCTGGCTCTTGCCATTGTTCTCTCTGGTTCTGGCCATTCTCCACTGGTTGCACTCTGGGTTCTTCTCTCCGGATGCGGGTTCGTCATCGTTTCGATTCTTATTTTCTCCCCGTTGTTCAAATGGATGGATAACCAATGCCCTAATGGCGAGCATGTCAGAGAGATATTCATATGCATCACTCTAGCTTGTGTTCTAGCCGCTGGATTCGTCACTGATTTTATCGGAATTCACGCGATGTTCGGAGCTTTCGTGGTCGGAATTCTAGTCCCGAAGGACGGATCATTCGCCGGAGCTTTGACGGAAAAAGTGGAAGATCTTGTCTCCGGTCTATTCCTTCCTCTTTACTTTGTATCCAGTGGATTGAAGACTGATATAACGAAAATTCAAGGCCTTCAATCTTGGGGGCTTCTGGTTTTAGTCATATTTGCTGCTTGTTTCGGAAAGATTGTAGGCACCGTCGCAGTATCCTTATCGTGCAAGATTCCGGCTCGAGAGGCGTTGACGCTCGGGTTTTTGATGAACAGTAAAGGGTTGGTGGAGCTCATCGTCCTCAACATCGGGAAAGATCGAAAGGTTTTGAATGATCAGACCTTTGCGATCATGGTTTTAATGGCGGTTTTTACAACTTTCATTACAACTCCTCTCGTCATTTCCGTCTACAAGCCGTCTAGACAGGAGGAAACAGATGATTACAAGCACAGAAAAATCGAGCGAGAAAATCCAGACACAGAGCTCAGGGTCTTGGCCTGCTTTCACAGTACAGGAAACATCCCGTCGTTGATAAATCTGCTCGAGGCGTCGAGAGGGTCGGAGAAACGCGACGGACTCTGCGTATATGCAATGCACCTGATGGAGCTCTCCGAGAGGTCTTCCGCCATTATAATGGTGCATAAAGCGAGAAAAAACGGCTTACCCTTCTGGATCAAAGGCCGGAGATCTGATTCCGAGCAGGTCATCGTTGCCTTCGAGGCGTACCAGCAACTGAGCCGAGTTTCAATCCGGCCAATGACGGCAATTTCTTCCATTTCGAGCATGCACGAAGACATCTGCACCACCGCCCGAATCAAAAAAGCTTCGATCATAATCCTTCCATATCATAAACACCAGAGAATGGACGGTTCGCTGGAGGTCACTCGCAGTAGCTTCCGGTTGGTCAACCAGAAAGTCCTTGATCACGCGCCGTGCTCCGTCGGAATTTTCGTCGATCGTGGACTTGGTGGACCCTTCCATATCCCTTCCAGTCACGTCTCTTATCTTATCACTGTTCTCTTCATCGGCGGTCCTGACGATCGGGAGGCGCTCGCTTATGGAACCCGGATGGCCGAGCATCCCGGCATTAGTTTAACTGTCGTCCGCTTCTCCCTCCATCCCGCCGCGACGGCGGAAACTGTCAGAATCCATATAAATCAAAACTCTTCCTCTTTAACAGGTTCAGATGACGGAGAAGAAGAATATTTTGAGCAGTACAAGCAAAAAGTAGCCGACAATAATTCGATTACATTCAATGAAAGAGGAGTAAAGAATTATGCAGAAATTATTGACGTGATCAGAAGATTAAAGCCGTGCAATCTGTTTCTTGCTGGTAGATTTCCCAGCGGGGAAGTAGCTTTAGCGTTGAACATCCGAAGTGAGTGCCCGGAGCTTGGCCCCGTCGGGAGCTTGTTGACTTCTACAGATTTTCCGACGACAGCTTCAGTTCTAGTGTTGCAGCAGAAATCATCTGCCTAA 1863 48.58 MGVALSITAFPVLARILAELKLLTTNIGRMAMSAAAVNDVAAWILLALAIVLSGSGHSPLVALWVLLSGCGFVIVSILIFSPLFKWMDNQCPNGEHVREIFICITLACVLAAGFVTDFIGIHAMFGAFVVGILVPKDGSFAGALTEKVEDLVSGLFLPLYFVSSGLKTDITKIQGLQSWGLLVLVIFAACFGKIVGTVAVSLSCKIPAREALTLGFLMNSKGLVELIVLNIGKDRKVLNDQTFAIMVLMAVFTTFITTPLVISVYKPSRQEETDDYKHRKIERENPDTELRVLACFHSTGNIPSLINLLEASRGSEKRDGLCVYAMHLMELSERSSAIIMVHKARKNGLPFWIKGRRSDSEQVIVAFEAYQQLSRVSIRPMTAISSISSMHEDICTTARIKKASIIILPYHKHQRMDGSLEVTRSSFRLVNQKVLDHAPCSVGIFVDRGLGGPFHIPSSHVSYLITVLFIGGPDDREALAYGTRMAEHPGISLTVVRFSLHPAATAETVRIHINQNSSSLTGSDDGEEEYFEQYKQKVADNNSITFNERGVKNYAEIIDVIRRLKPCNLFLAGRFPSGEVALALNIRSECPELGPVGSLLTSTDFPTTASVLVLQQKSSA 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1123460 1126011 + Bma006927.2 Bma12g00057 91483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00057 620 PANTHER CATION/H + ANTIPORTER 1 618 - -
Bma12g00057 620 PANTHER CATION/H(+) ANTIPORTER 18 1 618 - -
Bma12g00057 620 Gene3D - 309 566 - -
Bma12g00057 620 Pfam Sodium/hydrogen exchanger family 1 259 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Bma12g00057 620 Gene3D - 1 274 IPR038770 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00057 Bma-Chr12:1123460 Bma08g01037 Bma-Chr8:49500249 5.44E-116 dispersed
Bma12g00055 Bma-Chr12:1109001 Bma12g00057 Bma-Chr12:1123460 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00057 - - mnt:21386619 878.241