Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00080 ATGGAATTCTCCTACGAAGAACTTGCCAGTGCTACGAATTATTTCAATTTGGCTAATAAGATCGGGGAAGGCGGTTTCGGATCCGTGTATTATGCAGAGCTGAGAGGCGAGAAAGCCGCGATCAAGAAGATGGATATGCAGGCGACGAAAGAATTTCTCGCAGAGCTACAAGTTCTAACTCGTGTTCATCATTTGAACTTGGTGCGGCTCATAGGATATTGCGCTGAGGGTTCTCTTTTTCTGGTTTATGAATTCATCGAAAACGGGAACTTAAGCCAGCATTTGCGCGGCTTAGGGAGAGATGTATTGCCTTGGTCTAAAAGGGTTCAAATAGCCCTTGATTCAGCTAGAGGACTTGAATATATTCACGAACATACGGATCGGGTTTATATCCATCGCGATATCAAATCAGCGAATATTTTGATCGACAAGAACTTCCGAGCAAAGGTTGCAGATTTCGGATTGACTAAATTGACGGAAGTTGGCAACACAATCCAGACACGGGTCATGGGCACATTTGGATACATGCCTCCCGAATATGCTCAATACGGCGAAGTTTCTCCAAAAATAGATGTGTACGCATTTGGTGTCGTGCTTTATGAACTTATTTCTGCAAAGGAAGCCGTTATCAAAACAAATTGA 642 43.3 MEFSYEELASATNYFNLANKIGEGGFGSVYYAELRGEKAAIKKMDMQATKEFLAELQVLTRVHHLNLVRLIGYCAEGSLFLVYEFIENGNLSQHLRGLGRDVLPWSKRVQIALDSARGLEYIHEHTDRVYIHRDIKSANILIDKNFRAKVADFGLTKLTEVGNTIQTRVMGTFGYMPPEYAQYGEVSPKIDVYAFGVVLYELISAKEAVIKTN 213
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1468414 1469582 + Bma006952.1 Bma12g00080 91506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00080 213 Gene3D Phosphorylase Kinase; domain 1 1 85 - -
Bma12g00080 213 Gene3D Transferase(Phosphotransferase) domain 1 86 213 - -
Bma12g00080 213 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Bma12g00080 213 Pfam Protein tyrosine and serine/threonine kinase 16 205 IPR001245 GO:0004672|GO:0006468
Bma12g00080 213 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1 1 213 - -
Bma12g00080 213 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 1 213 IPR044812 GO:0019199|GO:0045087
Bma12g00080 213 SMART serkin_6 15 211 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00080 213 ProSiteProfiles Protein kinase domain profile. 15 213 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00080 213 ProSitePatterns Protein kinases ATP-binding region signature. 21 43 IPR017441 GO:0005524
Bma12g00080 213 SUPERFAMILY Protein kinase-like (PK-like) 3 207 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g01288 Bma-Chr2:55092325 Bma12g00080 Bma-Chr12:1468414 6.82E-157 dispersed
Bma12g00080 Bma-Chr12:1468414 Bma13g01247 Bma-Chr13:45772875 2.41E-76 dispersed
Bma12g00080 Bma-Chr12:1468414 Bma15g00184 Bma-Chr15:1925429 1.63E-68 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66804 PF07714 PK_Tyr_Ser-Thr 4.60E-44 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00080 - K13429 csin:114316727 375.941