Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00116 ATGTCTAATTGTGGTGATCGAATGGAGATTTTCGATATTTCGAGCAATGACTTTGTTGGAGAGATTCCATCAAGCATTTCCAAATGTCAAAACCTTAAGATCATGGATTTGGGTTATAACAAGCTGAATGGAACTATTCCAGTGGAAATTACAGATCTGAAGAGGCTTTTAGTGATTCGTTTGGGGAATAATTCGATTGGTGGATCGATTCCTGCAAATCTCGGAAATATCGAGGTGCTTCAAGTTTTGGATTTGCACAACCTCAATCTCGATGGAGAAATTCCGAGTAGTCTTAGCAGTTGCAGGTTTCTTCTTGAGCTGGATATTTCGAGTAATTATTTATACGGAGAAATTCCGGAGTCTCTTTACAACATGACGTATCTCGAAATCCTCGATATTCATCATAATCGTCTCAACGGAAGCATTCCTCAGAGTCTCGGAACATTATCAAAGCTTCAAACGTTAGATCTTTCGGAGAACTTTCTATCCGGTTTGATTCCATCTTCGCTTGGAAATCTGACAATGTTGAGAAATTTCAATGTCTCCTTCAATAATCTTTCTGGGTCTATTCCTGCTATGATCTCACTTCAAGGTTTTGGACCTTCTTCATTTTCAAACAATCCATTTCTCTGTGGTGCTCCTCTGGATTCTTGCTCTGCAAATGGCAGTGTTACGACCTCGAAGAAGAGCAAGGTTCTTAGCCCGTCTGCCATTGTCGCAATTGTGGCAGCTATCTTGATTCTTACCGGAGTTTGTGTGATTTCCGTTATGAATATCATGGCTCGACGGAGAAAAAAGGAACGAGAGGCAACAGTCATCGAGAGTACTCCACTGGCTTCAACCGATTCAAGTATTATTATTGGAAAACTTGTTCTTTTTAGTAAAAGTTTGCCTTCAAAGTATGAAGATTGGGAGGCTGGCACTAAAGCTTTGTTGGATAAAGAGTGCCTGATAGGCGGAGGAACGATAGGAACGGTCTATCGAACTGATTTCGATGGCGGGATTTCAATTGCAGTAAAAAAGCTCGAAACTCTCGGAAGAATCAGAAACCAAGAAGAGTTTGAGCAGGAAATCGGACGATTAGGATCTGTTCGACACCCAAATTTAGTCACGTTTCAAGGATACTATTGGTCTTCGACAATGCAACTGATTCTATCTGAATTTCTCCCGAACGGAAACTTGTACGAGAATCTCCACGGCCTGAACTTCGCTGGAACAAGCACCAGTGCCGGAAATATCGAACTGTACTGGTCGAGAAGATTCCAGATCGCCGTTGGAACGGCGAGGGCCTTGGCTTATCTTCACCACGATTGTAAACCTGCAATTCTTCACCTCAACATCAAATCAACTAACATACTATTAGATGAAAATTACGAGGCAAAGTTATCAGATTATGGGTTGGGAATATTGCTTCCAATTTTAGATAACAATGTTCTTACCAAGTTTCATACTTCTGTCGGATATGTTGCCCCGGAATTAGCGCAGAGCTCGAGATTGAGCAAAAAATGCGATGTTTATAGCTATGGAGTAATTCTTTTAGAGCTGGTGACGGGGAGAAAGCCGGTGGAGAGTACGAGGACTAACGAGGTTGTGATTTTGTGCGAGTTTGTGAGGGAGTATTTGGAAAACGGGTCTCCTTCAGATTGTTTCGATCCGAATTTACGAGGGTTCGAAGTGAACGAGCTCGTTCAAGTGATGAAATTGGGTTTGATTTGTTCGTCTGAAGTTGCTTCGAAGAGACCGAGCATGGCTGAAGTGGTTCAAGTTCTCGAGTCGATCAGAAATGGAATGGGATCATAG 1800 42.06 MSNCGDRMEIFDISSNDFVGEIPSSISKCQNLKIMDLGYNKLNGTIPVEITDLKRLLVIRLGNNSIGGSIPANLGNIEVLQVLDLHNLNLDGEIPSSLSSCRFLLELDISSNYLYGEIPESLYNMTYLEILDIHHNRLNGSIPQSLGTLSKLQTLDLSENFLSGLIPSSLGNLTMLRNFNVSFNNLSGSIPAMISLQGFGPSSFSNNPFLCGAPLDSCSANGSVTTSKKSKVLSPSAIVAIVAAILILTGVCVISVMNIMARRRKKEREATVIESTPLASTDSSIIIGKLVLFSKSLPSKYEDWEAGTKALLDKECLIGGGTIGTVYRTDFDGGISIAVKKLETLGRIRNQEEFEQEIGRLGSVRHPNLVTFQGYYWSSTMQLILSEFLPNGNLYENLHGLNFAGTSTSAGNIELYWSRRFQIAVGTARALAYLHHDCKPAILHLNIKSTNILLDENYEAKLSDYGLGILLPILDNNVLTKFHTSVGYVAPELAQSSRLSKKCDVYSYGVILLELVTGRKPVESTRTNEVVILCEFVREYLENGSPSDCFDPNLRGFEVNELVQVMKLGLICSSEVASKRPSMAEVVQVLESIRNGMGS 599
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1769373 1771254 - Bma006990.1 Bma12g00116 91542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00116 599 Gene3D Ribonuclease Inhibitor 1 222 IPR032675 -
Bma12g00116 599 SUPERFAMILY L domain-like 8 215 - -
Bma12g00116 599 ProSiteProfiles Protein kinase domain profile. 312 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00116 599 Gene3D Phosphorylase Kinase; domain 1 282 388 - -
Bma12g00116 599 Pfam Leucine rich repeat 127 186 IPR001611 GO:0005515
Bma12g00116 599 SUPERFAMILY Protein kinase-like (PK-like) 313 591 IPR011009 -
Bma12g00116 599 PANTHER UNNAMED PRODUCT 2 596 - -
Bma12g00116 599 PANTHER - 2 596 - -
Bma12g00116 599 Pfam Protein kinase domain 316 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00116 599 Gene3D Transferase(Phosphotransferase) domain 1 389 597 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00116 Bma-Chr12:1769373 Bma04g00995 Bma-Chr4:16141302 1.25E-14 dispersed
Bma12g00116 Bma-Chr12:1769373 Bma03g00194 Bma-Chr3:1487957 3.02E-09 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66806 PF00069 Pkinase 1.10E-34 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00116 - - csv:101212415 882.093