Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00129 ATGAGCGGCACCGGAACGGTGATGAACGTCACGATCCGGCAGCCGGCTTCGCCTAGTGCTGTCGTCACTTTACACGGCCAGTTTGAGATCTTATCATTATCCGGCTCGTTTCTACCGCCTCCAGCGCCCCAGGCAGCCACTGAGTTGACCATATATTTGGCCGGAGGGCAAGGGCAAGTGGTCGGAGGGAGTGTCGTCGGGAAACTCGTTGCTTCCGGTCCCGTTGTAATTATGGCCGCTTCGTTTAGCAACACTGCCTACGAGAGGCTTCCCCTTGACGACTATGAAGAGCCCCCGCCGTTGCCTATCCAAGGAAGCTCAATTGGATCACCCGGTGCAGTTAATCAGACACCTCAAGCTCCGCCATTAATGGCGGATGGGAATCAGCCGCCTTTATTTCATGGGATGCCTCCGAATCTTCTAAACTCCATTCAATTACCATCTGAAGCTTACTGGGCAAGTGGTCGACCTCCCTAG 477 54.72 MSGTGTVMNVTIRQPASPSAVVTLHGQFEILSLSGSFLPPPAPQAATELTIYLAGGQGQVVGGSVVGKLVASGPVVIMAASFSNTAYERLPLDDYEEPPPLPIQGSSIGSPGAVNQTPQAPPLMADGNQPPLFHGMPPNLLNSIQLPSEAYWASGRPP 158
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 1890793 1891269 - Bma007004.1 Bma12g00129 91555
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00129 158 MobiDBLite consensus disorder prediction 108 123 - -
Bma12g00129 158 MobiDBLite consensus disorder prediction 93 138 - -
Bma12g00129 158 Pfam Plants and Prokaryotes Conserved (PCC) domain 1 84 IPR005175 -
Bma12g00129 158 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 97 - -
Bma12g00129 158 ProSiteProfiles PPC domain profile profile. 1 104 IPR005175 -
Bma12g00129 158 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 1 158 IPR014476 GO:0003680
Bma12g00129 158 CDD DUF296 1 41 IPR005175 -
Bma12g00129 158 Gene3D - 1 98 - -
Bma12g00129 158 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 24-RELATED 1 158 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00129 Bma-Chr12:1890793 Bma07g01622 Bma-Chr7:51775117 3.39E-56 dispersed
Bma12g00127 Bma-Chr12:1877282 Bma12g00129 Bma-Chr12:1890793 1.20E-104 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00129 - - jre:109020760 219.55