Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00210 ATGTATCCTGGACCTCAGCTCAAACACTGTAACCCACTCTCTCTCTCTCCTCCCTCCCTGCCCACTTTCTCCGACCTGGTTTTTTGGCCAATGCCTCGTGAAATGACGGATTACAGCTTATCGACGATGCCCAATCTCGGGGCCGATGAGGATTCAGGGATGGATGTTTCCATCAGCTCTGATTTCTTTGCATCTGACCCTTTCAAAAAAATTTCTCTCACGCAGCCATCGTATGTGCCGACCACTTTCAGCCAGGAGACTCTGCGACGCCGCCTTCAGGCGCTGGTCGACGGCGCCTGCGAAAACTGGACCTACGCCATTTTCTGGCTGTGCTCCCATGATTTTCCCGATACTTCGGTTTTAGTGTGGGGAGATGGATACTACAAAGGGGAGGGGAGGAAAGGAAAAGGGAAAGCAAAGGTGACGGTGACGTCTCTGGCGGAACAAAAGCGCCGGAAGAAAGTCCTCTGGGAGCTGAAGTCGTTGATTTCCAGCTCTCCGGCTACCGTGGACGAAGAGGTTACTGACTCCGAGTGGTTCTTCTTGTTTTCAATGACTCAGACGTTCGTCAACGGAGTTGGGTTACTCGGCGAGGTGTTTTGCAATTCCACTTCCGTTTGGGTTTCCGGCGCCGACTGGCTGATACATTCGTCGTTTGATCGCGCTCACCAGGGTCACAATTGTGGTTTGGAGACGATGGTTTGCTTACCGGTGGCGAACGGAGTCGTCGAACTGGGGTCGACTGAGCTGATTTACCGTAGCTCCGAGTTGATGAATAAGGTTAGTGATCTGTTTAACGTAAATAATGTCGAAGTCTGTTCTTGGCCAGCGATGGACGCCGGCGATGATTATGAAACAGATCCATCGCCGTTCTGGATAAGTCGCTCACCGAGCGACATGAAAATCTCTCCTCCGACGAAACAAATTCATTTCGAAGACCCTAGCTCCAGTAGTTTAACGGAAAATCCAGCACCTGTTCAACAGCTGAAGCCTGAATCCAGCAAGAATCTGGATTTTGGAGAAAGTAAGAGGAGCTACTCCCAAATCGGATGGGAGGAGAAGAAATCTCCGGTATCTCGTTGCAACGACGACGACAAGATAGTTTCATTCGCTTCCGGCGAGGTACCGCCGTCTTCCGTTGGAAATGAAATCATCCGATTCCGATCATTCAAATCTGGAAGCTCCAGCCATTCGCGAGGTGGAGAGTAG 1209 50.95 MYPGPQLKHCNPLSLSPPSLPTFSDLVFWPMPREMTDYSLSTMPNLGADEDSGMDVSISSDFFASDPFKKISLTQPSYVPTTFSQETLRRRLQALVDGACENWTYAIFWLCSHDFPDTSVLVWGDGYYKGEGRKGKGKAKVTVTSLAEQKRRKKVLWELKSLISSSPATVDEEVTDSEWFFLFSMTQTFVNGVGLLGEVFCNSTSVWVSGADWLIHSSFDRAHQGHNCGLETMVCLPVANGVVELGSTELIYRSSELMNKVSDLFNVNNVEVCSWPAMDAGDDYETDPSPFWISRSPSDMKISPPTKQIHFEDPSSSSLTENPAPVQQLKPESSKNLDFGESKRSYSQIGWEEKKSPVSRCNDDDKIVSFASGEVPPSSVGNEIIRFRSFKSGSSSHSRGGE 402
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 2755073 2756281 - Bma007098.1 Bma12g00210 91636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00210 402 MobiDBLite consensus disorder prediction 303 341 - -
Bma12g00210 402 PANTHER TRANSCRIPTION FACTOR MYC2 60 294 - -
Bma12g00210 402 PANTHER MYC 60 294 IPR045084 GO:0003700|GO:0006355
Bma12g00210 402 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 88 265 IPR025610 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma07g00930 Bma-Chr7:34124281 Bma12g00210 Bma-Chr12:2755073 1.74E-87 dispersed
Bma12g00210 Bma-Chr12:2755073 Bma02g01104 Bma-Chr2:52722018 1.42E-18 dispersed
Bma12g00210 Bma-Chr12:2755073 Bma14g00153 Bma-Chr14:2131378 1.08E-87 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00210 K13422 - vvi:100250607 293.123