Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00232 ATGGTTTCGAGATCATATTCCAACTTGCTGGAGCTTGCATCCGGAGGTGGTTCTCCCACATTTGGTCGAGAGAGAAAAAGGCTTCCTCGGGTTGCTACAGTTGCCGGAGTATTGTCCGAGTTTGATGATGAAACCAGCAACAGTAATGGGTCAGGCGCTCCCTCCTCAGTCTCGCAAGAACGAATGATTATCGTGGGAAATCAACTTCCCCTCCGACAACACAAAAATGAAAATGGAGAATGGGAATTCAACTGGGACAAGGATTCTCTTCTTTTACAGCTTAAAGATGGTCTTGGAGAAGATGTGGAAGTAATTTACATTGGTTGTCTTAAAGAGGAGATTGACTCAAGTGAGCAAGACGATGTGGCACAAATTTTGCTTGACCAGTTCAAATGTGTCCCGACATTTCTTCCTCCCGAGCTTTTCACCAAATTTTATCATGGATTCTGCAAGCAACACTTGTGGCCCTTATTTCACTACATGCTTCCCTTGTCGCCCGATCTTGGGGGACGATTTGATCGAACCCTTTGGCAAGCTTATGTTTCAGTGAATAAGATATTTGCTGATAAAGTAATGGAAGTGATAAGCCCTGACGATGATTTCGTTTGGGTTCACGACTACCATTTGATGGTTTTGCCAACATTTTTAAGGAAGAGGTTCAATAGAGTGAAACTCGGGTTTTTCCTCCATAGCCCATTTCCTTCATCTGAGATATATAGAACACTTCCCGTAAGAGATGAACTTCTTCGGGCTTTGTTGAATGCTGACCTTGTTGGCTTCCATACTTTCGATTATGCCAGACACTTCCTCTCTTGCTGCAGTAGAATGCTCGGCTTGTCTTATCAATCTAAGAGGGGTTACATTGGGCTTGAATATTTTGGCCGAACTGTCAGCATTAAAATACTTCCAGTTGGTATTCATATTGGTCAGCTCCAAAACGCATTGAATTTACCTAAGACTCAATCTAAAATATCTGAATTGCGAGATCGATTTAAAGGTCAAACGGTTATGCTGGGAGTTGATGACATGGACATCTTCAAAGGTATAAGTTTGAAACTTTTGGCCATGGAACAGTTGCTTTTACAGCATCCAGACAAGAGGGGTAAGGTTGTTCTTGTTCAAATCGCAAACCCAGCAAGAGGTCGAGGGAAAGATGTTCAAGAGGTTATAGCTGAAACTAATGTCACTGTCAATCGAATAAACACAACATTTAGAAGGCCAGGATATGAACCTGTAATTTTAATCAATACCCCTCTTCAATTTTATGAGCGAATTGCTTATTATGCAATCGCAGAGTGTTGTCTTGTGACCGCAGTGAGGGATGGGATGAATCTTATCCCGTACGAATATATTATATGTCGACAAGGAAACGAAAAGTTAGACGAAACTCTAGGACTAGAACCTGCAACCCAAAAGAAGAGCATGCTTGTTGTCTCTGAATTTATAGGGTGTTCTCCATCACTGAGTGGAGCTATTCGAGTCAACCCATGGAATATCGAGTCAGTTGCAGAAGCCATGGAATCTGCTTTGGGAGTTTCAGAGGCAGAAAAACAGCTTCGGCATGATAAGCACTATCGTTATGTTAGTACACATGATGTTGCCTATTGGGCTCAAAGCTTTTTGCAAGATCTCGGCAGGGCATGTAGGGATCATGTAATGAGAAGGTGTTGGGGGATTGGATTCGGATTGGGATTTAGAGTAATGGCTCTTGATCCTAATTTTAGGAAGCTCTCGGTTGAACATATTGTTTCGGTTTATAAGAGGTCTAAGAATAGAGCAATCCTGCTAGATTATGATGGCACAATGTTGCAGCCTGGTTCGGTTAGCACGAGCCCAAGTGCGGAGGCTATTGAAATCTTGAACAGCTTGTGCAAAGATCCGAAGAATGTTGTGTTTCTTGTTAGTGGGAAGGATAGAAAGACTCTGACTGAATGGTTTTCGTCTTGTGAAAAGCTCGGAATCGCAGCCGAGCATGGCTACTACCTGAGGCCAAATTACACTGCAGATTGGGAAACTTGTGTTGCGGTGCCAGATTTTGGGTGGAAATTGATTGCAGAGCCAGTTATGCAATTATACACAGAAGCAACAGATGGCTCCTTCATCGAAGTGAAAGAGAGTGCTCTCGTTTGGAATTACATGCACGCCGATATCGATTTCGGGTCATGCCAGGCTAAGGAACTTTTAGATCATCTTGAAAGTGTTCTTGCCAATGAGCCTGTTACCGTCAAGAGCGGCCAACACCTCGTCGAGGTCAAACCCCAGAAACTTCTTTCTCTAACACGATATTACATTTGTTGGCAGGGCGTGAACAAGGGTATTGCAGCAGACTGCCTCCTACAAACAACACGGGCAAAAGACATGGTACCCGATTTTGTTCTATGCATAGGCGACGACAAGTCAGATGAGGACATGTTTGAGGTAATAATGGGTGCCAGAGCGTCGCTTTGTCCAGATGCAGAAGTGTTCGATTGTACGGTCGGCCAAAAACCGAGCAAGGCCAAGTATTACTTGGAAGACCCGACCGATATCTTGCGAATGTTAAAAGGTCTTGCCAATGCATCAGAGCAGGCTTGTCGAACTAGCCCCCCGACATCGCATAGGGTGGTGATTGCAGAGAGCAAGTAG 2625 43.89 MVSRSYSNLLELASGGGSPTFGRERKRLPRVATVAGVLSEFDDETSNSNGSGAPSSVSQERMIIVGNQLPLRQHKNENGEWEFNWDKDSLLLQLKDGLGEDVEVIYIGCLKEEIDSSEQDDVAQILLDQFKCVPTFLPPELFTKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRTLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSEIYRTLPVRDELLRALLNADLVGFHTFDYARHFLSCCSRMLGLSYQSKRGYIGLEYFGRTVSIKILPVGIHIGQLQNALNLPKTQSKISELRDRFKGQTVMLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGKVVLVQIANPARGRGKDVQEVIAETNVTVNRINTTFRRPGYEPVILINTPLQFYERIAYYAIAECCLVTAVRDGMNLIPYEYIICRQGNEKLDETLGLEPATQKKSMLVVSEFIGCSPSLSGAIRVNPWNIESVAEAMESALGVSEAEKQLRHDKHYRYVSTHDVAYWAQSFLQDLGRACRDHVMRRCWGIGFGLGFRVMALDPNFRKLSVEHIVSVYKRSKNRAILLDYDGTMLQPGSVSTSPSAEAIEILNSLCKDPKNVVFLVSGKDRKTLTEWFSSCEKLGIAAEHGYYLRPNYTADWETCVAVPDFGWKLIAEPVMQLYTEATDGSFIEVKESALVWNYMHADIDFGSCQAKELLDHLESVLANEPVTVKSGQHLVEVKPQKLLSLTRYYICWQGVNKGIAADCLLQTTRAKDMVPDFVLCIGDDKSDEDMFEVIMGARASLCPDAEVFDCTVGQKPSKAKYYLEDPTDILRMLKGLANASEQACRTSPPTSHRVVIAESK 874
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 3024284 3028061 - Bma007122.1 Bma12g00232 91658
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00232 874 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 6 1 857 - -
Bma12g00232 874 Gene3D - 722 863 IPR023214 -
Bma12g00232 874 Gene3D - 591 686 IPR023214 -
Bma12g00232 874 TIGRFAM T6PP: trehalose-phosphatase 589 851 IPR003337 GO:0003824|GO:0005992
Bma12g00232 874 CDD GT20_TPS 61 544 IPR001830 GO:0003824|GO:0005992
Bma12g00232 874 CDD HAD_TPP 593 842 - -
Bma12g00232 874 Gene3D Glycogen Phosphorylase B; 54 313 - -
Bma12g00232 874 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 594 809 IPR006379 -
Bma12g00232 874 Gene3D Glycogen Phosphorylase B; 314 529 - -
Bma12g00232 874 Pfam Trehalose-phosphatase 595 840 IPR003337 GO:0003824|GO:0005992
Bma12g00232 874 Pfam Glycosyltransferase family 20 61 544 IPR001830 GO:0003824|GO:0005992
Bma12g00232 874 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 548 - -
Bma12g00232 874 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 857 IPR001830 GO:0003824|GO:0005992
Bma12g00232 874 SUPERFAMILY HAD-like 592 851 IPR036412 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma05g00708 Bma12g00232 BCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00232 Bma-Chr12:3024284 Bma14g01784 Bma-Chr14:38417190 0 dispersed
Bma12g00257 Bma-Chr12:3341074 Bma12g00232 Bma-Chr12:3024284 0 transposed
Bma12g00232 Bma-Chr12:3024284 Bma05g00708 Bma-Chr5:41135268 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00232 K16055 - csv:101207192 1496.87