Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bma12g00251 | CGAAGGTTGGCGGCAAAAATGTTTCGATGCATAGTATGTACGCCACAAACTGCGGATGACGGCGGCGAGAAGCGGGAGGCGCGTGGAAGTACGACGCCCAGTTCAAAGGAAGCTGTCAAAAGCCTGACGACGCAGATAAAGGATATGGCATTGAAATTCTCTGGCGCTTATCGACAAGGCAAACCATGCTCAGGCCCAAGTAGTTACAGAAAAGGACAGAGACCTTACCCAGACTTCGATACCGCTTCAGAAGGGATTCCTTATCCATTCTTTGGAGGTGCAAGCTCGAGTTCGACCCCTGCGTGGGATTTCACAAGTGCTAGTTGCCACCCTGCTGCAAGATTGGATGAAGAACTTGTAACTGCTAGTGATGTTTTGCTTGATAGTGAGAATGAGCCCAAAGAATGGATGGCACAGGTGGAGCCAGGAGTGCACATTACGTTTGTGTCTCTTCCTCATGGGGGTAATGATCTTAGACGAATTCGCTTCAGCCGAGAAATGTTTAATAAATGGCAAGCTCAGAGATGGTGGGGTGAGAACTATGACCGGATAATGGAGCTCTATAATGTACAAAGATTTAATCGACAAGCTCTTCATACTCCACCAAGGTCTGAAGATGAGCTTCAGAGAGATTCATCTTACTCAATGATTGCATCTGCTCGGGAGAGTCCCATGACTTCTTCAGCACACAAGGAATGGGTGCCTAGGACCAAGAGTGGTGGCCATAACTACAACTCCGGGCTTGGTTCTTATGGTGCAGGCTGTCACAAAGGAGATGTTTCATCTTTTGAAGCATCAAGGACGACCACCTCTTCTAGAGATGAAGCTTCGGTCTCCGTCAGCAATGCCAGTGACCTAGAGGGAGAGTGGGTGGAAGAAGATGAGCCCGGAGTTTACATTACAATCAGACAGCTAGCCGATGGTACAAGAGAGCTCCGTCGTGTCAGATTTAGTCGGGAAAAGTTTGGAGAGACAAATGCCAAGCTGTGGTGGGAAGAGAATAGAGAGAGAATACAAGCTCAGTACCTTTGA | 1032 | 48.16 | RRLAAKMFRCIVCTPQTADDGGEKREARGSTTPSSKEAVKSLTTQIKDMALKFSGAYRQGKPCSGPSSYRKGQRPYPDFDTASEGIPYPFFGGASSSSTPAWDFTSASCHPAARLDEELVTASDVLLDSENEPKEWMAQVEPGVHITFVSLPHGGNDLRRIRFSREMFNKWQAQRWWGENYDRIMELYNVQRFNRQALHTPPRSEDELQRDSSYSMIASARESPMTSSAHKEWVPRTKSGGHNYNSGLGSYGAGCHKGDVSSFEASRTTTSSRDEASVSVSNASDLEGEWVEEDEPGVYITIRQLADGTRELRRVRFSREKFGETNAKLWWEENRERIQAQYL | 343 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
12 | 3228306 | 3232260 | + | Bma007143.1 | Bma12g00251 | 91677 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bma12g00251 | 343 | ProSiteProfiles | BRX domain profile. | 288 | 343 | IPR013591 | - | |
Bma12g00251 | 343 | MobiDBLite | consensus disorder prediction | 16 | 39 | - | - | |
Bma12g00251 | 343 | Pfam | Transcription factor BRX N-terminal domain | 29 | 63 | IPR027988 | - | |
Bma12g00251 | 343 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 7 | 343 | IPR044532 | - | |
Bma12g00251 | 343 | PANTHER | PROTEIN BREVIS RADIX-LIKE 1 | 7 | 343 | - | - | |
Bma12g00251 | 343 | MobiDBLite | consensus disorder prediction | 58 | 78 | - | - | |
Bma12g00251 | 343 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 288 | 342 | IPR013591 | - | |
Bma12g00251 | 343 | Pfam | Transcription factor regulating root and shoot growth via Pin3 | 134 | 188 | IPR013591 | - | |
Bma12g00251 | 343 | ProSiteProfiles | BRX domain profile. | 134 | 189 | IPR013591 | - |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Bma07g00967 | Bma12g00251 | CCT | |
Bma12g00251 | Bma14g00108 | CCT | |
Bma05g00692 | Bma12g00251 | BCT |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Bma05g00692 | Bma-Chr5:40473448 | Bma12g00251 | Bma-Chr12:3228306 | 0 | dispersed | |
Bma07g01011 | Bma-Chr7:40408959 | Bma12g00251 | Bma-Chr12:3228306 | 1.07E-120 | dispersed | |
Bma09g00974 | Bma-Chr9:49296372 | Bma12g00251 | Bma-Chr12:3228306 | 1.41E-102 | dispersed | |
Bma12g00251 | Bma-Chr12:3228306 | Bma14g00108 | Bma-Chr14:1466252 | 4.90E-130 | dispersed | |
Bma12g00251 | Bma-Chr12:3228306 | Bma05g00687 | Bma-Chr5:39923367 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bma12g00251 | - | - | zju:107434375 | 539.65 |