Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00321 ATGGAGAAGTACGAGAAACTGGAGAAGGTGGGAGAGGGAACGTATGGGAAGGTGTACAAGGCGAAAGACAAGGAGTCCGGCCAGTTTGTGGCCCTCAAGAAAACTCGGCTGGAAATGGACGAGGAGGGTATCCCGCCCACCGCTCTTCGTGAGGTTTCCCTTCTTCAATTGCTCTCTCAGTCCCTCTACGTCGTCCGTCTCCTCTGCGTCGAACATGTCCATAACCATAAGAACGGTAAACCCCTTCTTTACCTCGTCTTTGAGTACCTCGATACTGACCTTAAGAAGTTCATCGACTCCCATCGTAAGGGCCCCAACCCTAGGCCTCTCCCTGCCTCTCTCATTCAGAGCTTCCTGTTCCAACTTTGCAAGGGCGTCGCCCACTGTCACAGCCACGGCGTTCTCCATCGCGATCTGAAGCCCCAGAATCTTCTTCTTGATCAGAGTAAGGGTATTCTCAAAATTGCAGATCTCGGCCTCGGTCGCGCCTTCACTGTCCCCCTTAAAAGCTATACACACGAAGTTGTCACTCTCTGGTACAGAGCTCCAGAAGTCCTCCTTGGCTCCACTCATTACTCTACTGCGGTCGACATGTGGTCCGTTGGCTGCATATTTGCTGAGATGGTAAGACGGCAAGCTTTGTTCCCTGGAGATTCAGAGTTCCAACAATTACTCCACATTTTCAGGCTGCTGGGAACTCCCAATGAGAAGCAGTGGCCTGGAGTTTCCTCACTTCGGGATTGGCATGTCTATCCTCATTGGGAGCCTCAAAACCTTGCTCGAGCTGTTCCTACTCTTGGATCTGACGGCATTGACCTTCTTTCGGTAACC 831 51.87 MEKYEKLEKVGEGTYGKVYKAKDKESGQFVALKKTRLEMDEEGIPPTALREVSLLQLLSQSLYVVRLLCVEHVHNHKNGKPLLYLVFEYLDTDLKKFIDSHRKGPNPRPLPASLIQSFLFQLCKGVAHCHSHGVLHRDLKPQNLLLDQSKGILKIADLGLGRAFTVPLKSYTHEVVTLWYRAPEVLLGSTHYSTAVDMWSVGCIFAEMVRRQALFPGDSEFQQLLHIFRLLGTPNEKQWPGVSSLRDWHVYPHWEPQNLARAVPTLGSDGIDLLSVT 277
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 4829941 4830982 + Bma030497 Bma12g00321 91747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00321 277 Gene3D Phosphorylase Kinase; domain 1 1 91 - -
Bma12g00321 277 Gene3D Transferase(Phosphotransferase) domain 1 93 276 - -
Bma12g00321 277 SUPERFAMILY Protein kinase-like (PK-like) 1 275 IPR011009 -
Bma12g00321 277 ProSiteProfiles Protein kinase domain profile. 4 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00321 277 ProSitePatterns Protein kinases ATP-binding region signature. 10 33 IPR017441 GO:0005524
Bma12g00321 277 PANTHER CELL DIVISION PROTEIN KINASE 1 275 - -
Bma12g00321 277 ProSitePatterns Serine/Threonine protein kinases active-site signature. 134 146 IPR008271 GO:0004672|GO:0006468
Bma12g00321 277 Pfam Protein kinase domain 4 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bma12g00321 277 PANTHER CYCLIN-DEPENDENT KINASE B1-2 1 275 - -
Bma12g00321 277 SMART serkin_6 4 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00321 Bma-Chr12:4829941 Bma15g00419 Bma-Chr15:4536492 0 dispersed
Bma12g00321 Bma-Chr12:4829941 Bma08g01208 Bma-Chr8:51074399 5.53E-110 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
66809 PF00069 Pkinase 1.10E-57 CL0016 Bma PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00321 K07760 - csv:101204557 520.39