Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00365 ATGGATCATTTATGTTGCTTCCATTCTTTATGTTCTCAGGTTGTGGGAGGAAAGTCGTCGTGCCAGTCCGGAAAGGGTCAGGGCAATCTAATACCTGTCAAGTATGGCTTCAGTCTAGCTAAAGGGAAAGCAAATCATCCAATGGAGGATTATCATGTTGCTAAGTTTATTCCATTTGGTGGACATGAACTCGGCCTTTTTGCCATATACGATGGACATCTAGGAGATACTGTGCCTGCCTATTTACAAAAGCATCTGTTTTGTAATATCTTGAAGGATGAGACGTTTTGGACTAATCCTCGGAAATCTATCTCGGAAGCCTATGAGAGGACAGACCAAGCAATTCTTTCTCACTCTCCTGACCTAGGGAGAGGCGGGTCGACTGCAGTTACTGCTATTCTGATAAATGGTCGGAAGTTATGGGTAGCAAATGTTGGAGATTCACGAGCAGTTCTTTCGAGGAGAGGGCAAGCCGAGCAGATGACGATTGATCATGAGCCAAATAAGGATAGGGGTAGCATCGAGGATAGAGGTGGCTTTGTCTCAAATCTGCCAGGGGATGTTGCAAGAGTTAACGGACAGCTGGCTGTTTCTCGAGCGTTCGGCGACAAGAACCTAAAAATGCACTTGCGATCCGATCCCGATGTAAAAGAGGCCGATATCAATGAAGAGACCGATCTTCTTATTTTAGCCAGCGATGGCATATGGAAGGTGATGTCGAATCAAGAAGCAGTAGATATCGGGCAAAAGACGAAAGACCCGGAGAAGGCAGCCAAGCAACTGGTGTCAGAGGCGTTGAACCGCGAAAGCAAAGATGATATCTCGGTCGTCGTGGTTCGTTTTGCCAGC 849 46.53 MDHLCCFHSLCSQVVGGKSSCQSGKGQGNLIPVKYGFSLAKGKANHPMEDYHVAKFIPFGGHELGLFAIYDGHLGDTVPAYLQKHLFCNILKDETFWTNPRKSISEAYERTDQAILSHSPDLGRGGSTAVTAILINGRKLWVANVGDSRAVLSRRGQAEQMTIDHEPNKDRGSIEDRGGFVSNLPGDVARVNGQLAVSRAFGDKNLKMHLRSDPDVKEADINEETDLLILASDGIWKVMSNQEAVDIGQKTKDPEKAAKQLVSEALNRESKDDISVVVVRFAS 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6487620 6489143 + Bma030499 Bma12g00365 91791
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00365 283 ProSiteProfiles PPM-type phosphatase domain profile. 34 281 IPR001932 -
Bma12g00365 283 SUPERFAMILY PP2C-like 30 281 IPR036457 -
Bma12g00365 283 CDD PP2Cc 33 281 IPR001932 -
Bma12g00365 283 PANTHER PROTEIN PHOSPHATASE 2C 2 282 IPR015655 GO:0004722|GO:0006470
Bma12g00365 283 Pfam Protein phosphatase 2C 42 274 IPR001932 -
Bma12g00365 283 SMART PP2C_4 22 279 IPR001932 -
Bma12g00365 283 Gene3D - 30 283 IPR036457 -
Bma12g00365 283 PANTHER PHOSPHATASE 2C FAMILY PROTEIN 2 282 - -
Bma12g00365 283 SMART PP2C_SIG_2 45 281 IPR001932 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00569 Bma-Chr5:33234728 Bma12g00365 Bma-Chr12:6487620 0 dispersed
Bma11g00807 Bma-Chr11:24502658 Bma12g00365 Bma-Chr12:6487620 2.34E-102 dispersed
Bma12g00365 Bma-Chr12:6487620 Bma14g00257 Bma-Chr14:3049750 1.60E-110 dispersed
Bma12g00365 Bma-Chr12:6487620 Bma07g00627 Bma-Chr7:9974271 6.55E-112 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00365 K17506 - pvy:116142160 465.692