Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00367 GCTATGGAGGCTGGGATTGTCAGAACTCAACTCAATGGCTCTCGCGTTTGGCGCACCAAGGGCCTCATTGGCGGCAAATGGACTGACGCCTATGATGGGAAGACCATTAAGGTCTACAATCCTTCGACTGGGGAAGTTGTAGCTGATGTCGCGTGTATGGGTAGAAGGGAGGCGGAAGATGCTATCGCTTGCGCCGCTGAGGCTTTTAAGACTTGGGGAAAGCTTACAGCACTTGAAAGGAGCAAACGTATGAGGAAATGGTTTGATTTACTGATTTCACACAAGGAAGAGCTTGGCCAACTCATAACCTTAGAGCAAGGAAAGCCCCTTAAAGACGCCATTGGTGAGGTCGTCTTCGGAGCTAGCTACATTGAGTTTTTTGCAGAAGAGGCTAAACGAGTCTATGGTGATATAATTCCATCTACTTTAGGCGATCGCCGTCTTCTGATCTTAAGACAGCCCGTTGGAGTTGTTGGTGCAATTACACCATGGAACTTTCCTTTCGCTATGATTGCACGAAAGAAGCTTCATGAACACCTAATTGCACAATTTGTTGGTCCTGCTCTTGCATGTGGCTGCACTATTGTCATAAAACCCTCTGAACTTACACCTCTCACGGCCTTAGCTGCTGCTGAGCTCTCCCTTCAGGCCGGAATCCCCCCAGGTGTTGTGAATGTGGTCATGGGAATTGCTCCTGAAATTGGGGAGGCTTTACTTGTCAGCAAAGAGGTAAGAAAGATAACTTTTACGGGCTCAACAGCAGTAGGGAAGATGTTGATGGCTGGTTGTGCCGATACCGTTAAAAAGGTATCTCTGGAGCTTGGTGGCAATGCACCTTGCATTGTGTTTGATGATGCAGACATTGAGGTTGCAATACAAGGAACTCTTGCTGCAAAGTTCCGAAACACTGGACAAACTTGTGTCTGCGCCAACAGGATCTTTGTTCAGGAAGGCATATACGATAAATTCGCTGCTGCATTGACGAAAGAAATTCGGAATCTGCGAGTAGGAGATGGCTTTGGTGAAGGAGTGGTTCTGGTAATAACTTATGCATTTTACATTTTTTATACTGATTCTCCTAGCCAGTCAGGAGCAAAAGTTCTTCTCGGGGGCCGAAGGCATAGGCTTGGAATGACCTTTTATGAGCCGACGGTTATTAAGGATGTGAAGAACGACATGCGGATAGCCAGAGAGGAAGTATTTGGTCCTGTCGCACCTTTATTGCGTTTTAAAACTGAAGAGGAAGTCATTGCCCTTGCCAACGATACCAATGCAGGTTGGTTGGCTGCTTACGTATTCACGACCAATGTCCAAAGATCTTGGCGTATGACTGAATCTCTTGAATACGGCATTGTTGGTGTCAACGAAGGACTCATTTCTACAGAGGTAGCTCCATTTGGAGGCTTTAAACAGTCGGGACTTGGTCGGGAAGGTTCGAAATACGGGATGGATGACTTTCTGGAGGTATTGTCTTTCTTAAATTCTTTTCTAGTCTATCTATTGAATTTTTGA 1512 46.03 AMEAGIVRTQLNGSRVWRTKGLIGGKWTDAYDGKTIKVYNPSTGEVVADVACMGRREAEDAIACAAEAFKTWGKLTALERSKRMRKWFDLLISHKEELGQLITLEQGKPLKDAIGEVVFGASYIEFFAEEAKRVYGDIIPSTLGDRRLLILRQPVGVVGAITPWNFPFAMIARKKLHEHLIAQFVGPALACGCTIVIKPSELTPLTALAAAELSLQAGIPPGVVNVVMGIAPEIGEALLVSKEVRKITFTGSTAVGKMLMAGCADTVKKVSLELGGNAPCIVFDDADIEVAIQGTLAAKFRNTGQTCVCANRIFVQEGIYDKFAAALTKEIRNLRVGDGFGEGVVLVITYAFYIFYTDSPSQSGAKVLLGGRRHRLGMTFYEPTVIKDVKNDMRIAREEVFGPVAPLLRFKTEEEVIALANDTNAGWLAAYVFTTNVQRSWRMTESLEYGIVGVNEGLISTEVAPFGGFKQSGLGREGSKYGMDDFLEVLSFLNSFLVYLLNF 503
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 6536750 6541247 + Bma007299.1 Bma12g00367 91793
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00367 503 CDD ALDH_F5_SSADH_GabD 38 489 - -
Bma12g00367 503 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 16 489 - -
Bma12g00367 503 PANTHER SUCCINATE-SEMIALDEHYDE DEHYDROGENASE, MITOCHONDRIAL 16 489 - -
Bma12g00367 503 Pfam Aldehyde dehydrogenase family 27 489 IPR015590 GO:0016491
Bma12g00367 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 33 486 IPR016162 GO:0016491
Bma12g00367 503 SUPERFAMILY ALDH-like 13 489 IPR016161 GO:0016491
Bma12g00367 503 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 276 461 IPR016163 GO:0016620
Bma12g00367 503 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 300 311 IPR016160 GO:0016491
Bma12g00367 503 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 272 279 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00591 Bma-Chr5:35840271 Bma12g00367 Bma-Chr12:6536750 0 dispersed
Bma12g00367 Bma-Chr12:6536750 Bma12g00574 Bma-Chr12:24926926 0 dispersed
Bma12g00367 Bma-Chr12:6536750 Bma07g00481 Bma-Chr7:5816668 2.39E-97 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00367 K17761 - mnt:21402189 698.738