Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00372 ATGGAGTTGTTCAATAGTTTCCAGAGAAATTCTCTCTTTCTAAATCTCTTGTTCATCCTGGCTATGGCTTCCTCTAACTTGGTCCATGCCCAAGGAACAAGAGTGGGTTTTTATTCAAGTACATGTCCTAACGTAGAATCCATAGTTCGAACAACTGTTCAGTCCCATTTTCGTTCTGATCCCACCATAGCACCCGGCTTGCTGAGAATGCACTTCCATGACTGCTTTGTTCAAGGTTGTGACGGCTCGATTCTCATCGACGGCACTAACACCGAAAAAACCGGCGGGCCAAACCGCCTGCTCAGAGGCTACGATGTTATCGATGACGCCAAGTCCCAGCTGGAGACTGCATGCCCTGGCATCGTCTCTTGCGCTGACATTCTTGCTCTTGCTGCTCGGGATTCCGTCGTCTTGACCGGTGGTCTAACTTGGCGGGTGCCTACTGGACGAAGAGATGGAAGAGTTTCTTTGGCGTCTGAGACGTCCAATCTGCCTGGATTTAGAGACTCGGTGGATGTGCAAAAACAGAAGTTTTCAGACAAAGGCTTAAACGCACAAGATTTAGTCACCCTTGTTGGTGGACACACGATTGGAACTGCAGCTTGCCAGCTCTTCAGCTACAGATTGTATAATACGACCTCAGCAACTTCTGATCCGTCCATTGCCTCTGCATTCCTTCCTCAACTCCAAACTCTCTGCCCTCTAAACGGAGACGGTTCAAGAAGAGTCGCTCTGGACACGGGAAGCCAAAACCAGTTCGACAATTCTTTCTTCTCGAATTTGAGGAGCGGGCGAGGAGTTCTCGAGTCCGATCAAATGCTGTGGACCGATCCCTCGACGCAGACCATCGTTCAACGATTCTTGGGGATTCGAGGATTGCTTGGACTGACATTCAGTGTTGAGTTTGGAAAATCCATGGTGAAGATGAGTAATATTGAAGTGAAGACGGGCAGTGCTGGAGAAATTCGGAGAATATGTTCTGCAATAAATTAA 993 48.24 MELFNSFQRNSLFLNLLFILAMASSNLVHAQGTRVGFYSSTCPNVESIVRTTVQSHFRSDPTIAPGLLRMHFHDCFVQGCDGSILIDGTNTEKTGGPNRLLRGYDVIDDAKSQLETACPGIVSCADILALAARDSVVLTGGLTWRVPTGRRDGRVSLASETSNLPGFRDSVDVQKQKFSDKGLNAQDLVTLVGGHTIGTAACQLFSYRLYNTTSATSDPSIASAFLPQLQTLCPLNGDGSRRVALDTGSQNQFDNSFFSNLRSGRGVLESDQMLWTDPSTQTIVQRFLGIRGLLGLTFSVEFGKSMVKMSNIEVKTGSAGEIRRICSAIN 330
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7081697 7082867 + Bma007312.1 Bma12g00372 91798
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00372 330 Gene3D - 36 330 - -
Bma12g00372 330 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 Gene3D Peroxidase, domain 2 165 309 - -
Bma12g00372 330 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Bma12g00372 330 PANTHER PEROXIDASE 25-RELATED 17 328 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PANTHER PEROXIDASE 17 328 - -
Bma12g00372 330 Pfam Peroxidase 49 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 SUPERFAMILY Heme-dependent peroxidases 34 330 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 ProSiteProfiles Plant heme peroxidase family profile. 32 330 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00372 330 CDD secretory_peroxidase 34 329 IPR033905 GO:0004601|GO:0042744
Bma12g00372 330 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g01415 Bma-Chr3:37141928 Bma12g00372 Bma-Chr12:7081697 3.46E-128 dispersed
Bma03g01416 Bma-Chr3:37171462 Bma12g00372 Bma-Chr12:7081697 1.04E-128 dispersed
Bma12g00372 Bma-Chr12:7081697 Bma12g00390 Bma-Chr12:8183438 0 dispersed
Bma12g00372 Bma-Chr12:7081697 Bma12g00373 Bma-Chr12:7173094 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00372 K00430 - qsu:111997082 505.753