Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00373 ATGGAGTTGTTCAATAGTTTCCAGAGAAATTCTCTCTTTCTAAATCTCTTGTTTATCCTGGCTATGGCTTCCTCTAACTTGGTCCATGCCCAAGGAACAAGAGTGGGTTTTTATTCAAGAACATGTCCTAGCGTAGAATCCATAGTTCGAACAACTGTTCAGTCCCATTTTCGTTCTGATCCCACCATAGCACCCGGCTTGCTGAGAATGCACTTCCATGACTGCTTTGTTCAAGGTTGTGACGGCTCGATTCTCATCGACGGCACTGACACCGAAAAAACCGGCGGCCCAAACCTCTTGCTCAGAGGCTACGATGTTATCGATGATGCCAAGTCCCAGCTTGAGACTGCATGCCCTGGCATCGTCTCTTGCGCTGACATTCTTGCTCTTGCTGCTCGGGATTCCGTCGTCTTGGTAATTACAGTCTTCATTTGGTTATTATTATTACTTTGTTTTTTGCAGACCGGTGGTCTAACTTGGCAGGTGCCTACTGGACGAAGAGATGGAAGAGTTTCTTTGGCGTCTGAGACGTCCAATCTGCCTGGATTTAGAGACTCGGTAGATGTGCAAAAACAGTTGTTTTCAGACAAAGGCTTAAACGCACAAGATTTAGTCACCCTTGTTGGTGGACACACGATTGGAACTTCAGCTTGCCAGTTCTTCAGCTACAGATTGTATAATACGACCTCAGAAACTTCTGATCCGTCCATTGCCTCCGCATTCCTTCCTCAACTCCAAACTCTCTGCCCTCAAAACGGAGACGGTTCAAGAAGAGTCGCTCTCGACACGGGAAGCCAAAACCGGTTCGACAATTCTTTCTTCTCGAATTTGAGGAGCGGGCGAGGAGTTCTCGAGTCCGATCAAATGCTGTGGACAGATCCCTCGACGCAGACCATCGTTCAACGATTCTTGGGGATTCGAGGATTGCTTGGACTGACATTCAGTGTTGAGTTTGGAAAATCCATGGTGAAGATGAGTAATATTGAAGTGAAGACGGGCAGTGCTGGAGAAATTCGGAGAATATGTTCTGCAATAAATTAA 1041 46.49 MELFNSFQRNSLFLNLLFILAMASSNLVHAQGTRVGFYSRTCPSVESIVRTTVQSHFRSDPTIAPGLLRMHFHDCFVQGCDGSILIDGTDTEKTGGPNLLLRGYDVIDDAKSQLETACPGIVSCADILALAARDSVVLVITVFIWLLLLLCFLQTGGLTWQVPTGRRDGRVSLASETSNLPGFRDSVDVQKQLFSDKGLNAQDLVTLVGGHTIGTSACQFFSYRLYNTTSETSDPSIASAFLPQLQTLCPQNGDGSRRVALDTGSQNRFDNSFFSNLRSGRGVLESDQMLWTDPSTQTIVQRFLGIRGLLGLTFSVEFGKSMVKMSNIEVKTGSAGEIRRICSAIN 346
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7173094 7174259 + Bma007315.1 Bma12g00373 91799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00373 346 PRINTS Haem peroxidase superfamily signature 203 218 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Haem peroxidase superfamily signature 262 277 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 203 213 IPR019793 -
Bma12g00373 346 Gene3D - 36 346 - -
Bma12g00373 346 Gene3D Peroxidase, domain 2 181 325 - -
Bma12g00373 346 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Plant peroxidase signature 276 293 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Plant peroxidase signature 156 171 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Plant peroxidase signature 202 214 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Plant peroxidase signature 260 275 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Plant peroxidase signature 320 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PANTHER PEROXIDASE 10 344 - -
Bma12g00373 346 CDD secretory_peroxidase 34 345 IPR033905 GO:0004601|GO:0042744
Bma12g00373 346 ProSiteProfiles Plant heme peroxidase family profile. 32 346 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 PANTHER PEROXIDASE 25-RELATED 10 344 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Bma12g00373 346 SUPERFAMILY Heme-dependent peroxidases 34 346 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma12g00373 346 Pfam Peroxidase 49 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00373 Bma-Chr12:7173094 Bma12g00390 Bma-Chr12:8183438 0 dispersed
Bma14g00406 Bma-Chr14:4809329 Bma12g00373 Bma-Chr12:7173094 5.94E-80 dispersed
Bma12g00372 Bma-Chr12:7081697 Bma12g00373 Bma-Chr12:7173094 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00373 K00430 - qsu:111999599 498.049