Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00374 AGAGAAATGGCTGCGACATCTGGGTCTGTGCTTAATGGATTAAGCTCTCCTTTCTTGTGCGGAGGGAAGAGAAGCCAGGCCTTGCTGGCCGGGCCAGCCAGAGTCGCCGTCAGTGCCTCTGTTCCTCGCAGGCAGCTGGTGGTGGTCGCCGCCAAGAAATCTTGGCTTCCGGGTGTTCGAGGTGGTGGCAACTTGGTCGACCCAGAATGGCTCGATGGCTCGCTACCAGGAGACTACGGTTTCGACCCACTTGGATTAGGGAAGGACCCGGCATTTCTAAAATGGTACAGAGAGGCAGAGCTAATCCACGGACGATGGGCAATGGCCGCCGTCATCGGAATCTTGATCGGCCAAGCTTATAGCGGCATCCCCTGGTTCGAGGCCGGAGCTGCCCCTGGCGCAGTGTCGCCCTTCTCCTTCGGCACCCTGCTCGGCACCCAACTCCTGCTAATGGGGTGGGTCGAGAACAAGAGATGGGTAGATTTCTTCAACCCGGACTCGCAGTCGGTGGAGTGGGCGACGCCATGGTCGAGAACAGCCGAAAATTTCTCCAATGCCACCGGTGAGCAGGGGTACCCCGGCGGAAAATTCTTCGACCCGCTAGGCGTGGCCGGAACCATTAAAGATGGGGTTTACATTCCGGACGTGGAGAAGCTGGAGAGACTGAAGTTGGCGGAGATAAAGCATGCGAGAATCGCCATGTTAGCGATGCTTATTTTCTACTTTGAAGCTGGACAGGGGAAGACTCCCCTCGGTGCCATTGGATTGTGA 771 57.2 REMAATSGSVLNGLSSPFLCGGKRSQALLAGPARVAVSASVPRRQLVVVAAKKSWLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVIGILIGQAYSGIPWFEAGAAPGAVSPFSFGTLLGTQLLLMGWVENKRWVDFFNPDSQSVEWATPWSRTAENFSNATGEQGYPGGKFFDPLGVAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAMLIFYFEAGQGKTPLGAIGL 256
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 7192871 7193955 + Bma007316.1 Bma12g00374 91800
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00374 256 PANTHER CHLOROPHYLL A-B BINDING PROTEIN CP24 10A, CHLOROPLASTIC 3 256 - -
Bma12g00374 256 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 3 256 IPR001344 GO:0009765|GO:0016020
Bma12g00374 256 Gene3D Chlorophyll a/b binding protein domain 68 254 - -
Bma12g00374 256 Pfam Chlorophyll A-B binding protein 68 244 IPR022796 -
Bma12g00374 256 SUPERFAMILY Chlorophyll a-b binding protein 65 255 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma05g00575 Bma-Chr5:33408283 Bma12g00374 Bma-Chr12:7192871 2.39E-164 dispersed
Bma12g00374 Bma-Chr12:7192871 Bma10g00275 Bma-Chr10:2490354 9.44E-35 dispersed
Bma14g01040 Bma-Chr14:12357473 Bma12g00374 Bma-Chr12:7192871 6.60E-11 dispersed
Bma12g00374 Bma-Chr12:7192871 Bma12g00392 Bma-Chr12:8244902 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00374 K08917 - jre:109007089 448.358