Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00390 TATCCGCTTCAAACCCCCTTAGGGATTTCCTCTCTCTGTATCTTAGTTTTCATGGAGTTGTTAAATAGTTTCCAGAGAAATTCTCTCTTTCTAAATCTCTTGTTCATCCTGGCTATGGCTTCCTCTAACTTGGTCCATGCCCAAGGGACAAGAGTGGGTTTTTATTCAAGTACATGTCCTAACGTAGAATCCATAGTTCGAACAACTGTTCAGTCCCATTTTCGTTCTGATCCCACCATAGCACCCGGCTTGCTGAGAATGCACTTCCATGACTGCTTTGTTCAAGGTTGTGACGGCTCGATTCTCATCGACGGCACTAACACCGAAAAAACCGGCGGGCCAAACCGCTTGCTCAGAGGCTACGATGTTATCGATGACGCCAAGTCCCAGCTGGAGACTGCATGCCCTGGCATCGTCTCTTGCGCTGACATTCTTGCTCTTGCTGCTCGGGATTCCGTCGTCTTGACCGGTGGTCTAACTTGGCGGGTGCCTACTGGACGAAGAGATGGAAGAGTTTCTTTGGCGTCTGAGACGTCCAATCTGCCTGGATTTAGAGACTCGGTGGATGTGCAAAAACAGAAGTTTTCAGACAAAGGCTTAAACGCACAAGATTTAGTCACCCTTGTTGGTGGACACACGATTGGAACTGCAGCTTGCCAGCTCTTCAGCTACAGATTGTATAATACGACCTCAGCAACTTCTGATCCGTCCATTGCCTCTGCATTCCTTCCTCAACTCCAAACTCTCTGCCCTCTAAACGGAGACGGTTCAAGAAGAGTCGCTCTGGACACGGGAAGCCAAAACCAGTTCGACAATTCTTTCTTCTCGAATTTGAGGAGCGGGCGAGGAGTTCTCGAGTCCGATCAAATGCTGTGGACCGATCCCTCGACGCAGACCATCGTTCAACGATTCTTGGGGATTCGAGGATTGCTTGGACTGACATTCAGTGTTGAGTTTGGAAAATCTATGGTGAAGATGAGTAATATTGAAGTGAAGACGGGCAGTGCTGGAGAAATTCGGAGAATATGTTCTGCAATAAATTAA 1044 47.8 YPLQTPLGISSLCILVFMELLNSFQRNSLFLNLLFILAMASSNLVHAQGTRVGFYSSTCPNVESIVRTTVQSHFRSDPTIAPGLLRMHFHDCFVQGCDGSILIDGTNTEKTGGPNRLLRGYDVIDDAKSQLETACPGIVSCADILALAARDSVVLTGGLTWRVPTGRRDGRVSLASETSNLPGFRDSVDVQKQKFSDKGLNAQDLVTLVGGHTIGTAACQLFSYRLYNTTSATSDPSIASAFLPQLQTLCPLNGDGSRRVALDTGSQNQFDNSFFSNLRSGRGVLESDQMLWTDPSTQTIVQRFLGIRGLLGLTFSVEFGKSMVKMSNIEVKTGSAGEIRRICSAIN 347
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 8183438 8184667 + Bma007354.1 Bma12g00390 91816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00390 347 ProSitePatterns Peroxidases active site signature. 81 92 IPR019794 GO:0004601
Bma12g00390 347 SUPERFAMILY Heme-dependent peroxidases 51 347 IPR010255 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 Gene3D - 53 347 - -
Bma12g00390 347 Pfam Peroxidase 66 304 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 Gene3D Peroxidase, domain 2 182 326 - -
Bma12g00390 347 CDD secretory_peroxidase 51 346 IPR033905 GO:0004601|GO:0042744
Bma12g00390 347 PRINTS Plant peroxidase signature 321 334 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 83 103 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 59 78 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 157 172 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 261 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 138 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 119 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 203 215 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Plant peroxidase signature 277 294 IPR000823 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PANTHER PEROXIDASE 34 345 - -
Bma12g00390 347 ProSitePatterns Peroxidases proximal heme-ligand signature. 204 214 IPR019793 -
Bma12g00390 347 ProSiteProfiles Plant heme peroxidase family profile. 49 347 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Haem peroxidase superfamily signature 263 278 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Haem peroxidase superfamily signature 157 169 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Haem peroxidase superfamily signature 81 95 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Haem peroxidase superfamily signature 139 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PRINTS Haem peroxidase superfamily signature 204 219 IPR002016 GO:0004601|GO:0006979|GO:0020037
Bma12g00390 347 PANTHER PEROXIDASE 25-RELATED 34 345 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00372 Bma-Chr12:7081697 Bma12g00390 Bma-Chr12:8183438 0 dispersed
Bma12g00373 Bma-Chr12:7173094 Bma12g00390 Bma-Chr12:8183438 0 dispersed
Bma12g00390 Bma-Chr12:8183438 Bma12g00391 Bma-Chr12:8225846 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00390 K00430 - qsu:111999599 505.753