Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00418 ATGGGAGAGAGGCAGCAGCGCCATGACCCGGAGATCGTCAGTCGCTCGCATCATCGGTTGCTGGCCGATTTGCTCGGAAGTGTTTGTGAATCTCTCTCGCTCGATGAGAGTATGGTAGCTGGTAAGGTGGTGCTTTGCTTCACTACATCCTCTCGTAGTTCAGCTGTTATTTCCGCCCAAGCGGCCGTGAAAGCTGCAGGCGGCGTTGGGGTGATCGCAGCCAAGAATCCGACCAACGTTGTCATGGCATGCGATCACAGTAGTTTCCCATGCATTCAAGTTGACTACGAGATTGGTACTAGATTACTCTTCTACTTTCGCTCCACCAGTTCTCCAAAAGTGAAGTTGAGCACTTCCAGAACCGTTGTGGGCAAGCCTGTCTCAGCCAGTGTCTCCTATTTCTCGTCTCGAGGGCCTAACTCTGTGGCGCCTGAGATTCTGAAACCAGACATAGCAGCACCTGGTGTTAACATACTGGCCGCCACTTCTCCCCTCCAACGGGGGAGTGTCGGCGGGTACTCAATCATCTACGGAACTTCCATGGCTACTCCTCACGTCTCCGGCATCGTGGCGCTTCTCAAATCCGTCCACCCTGGTTGGTCTCCAGCCGCACTTAAATCTGCTCTTATCACGACAGCGTGGAATCACGACCCATCTGGGTTACCCATTTTCGCCGATGGTGCCACCAGAAAGCCTGCCGATGCATTCGACTACGGAGGTGGAATTGCTAATCCGAACGGAGCTGCCCGCCCTGGTTTGGTCTATGACATGGACACCGCCGACTACCTACGCTACCTCTGTTCTATGGGCTACAACAGTAACGGGATATCTGGACTAGCACGCAATGAGACGACTTGCCCGTCGGAGAAGTCATCTCTAACGAACCTAAACTTTCCTTCCATCACAATCCCAAGGCTCACAAACTCTACCACCGTGCGAAGGACGGTGACAAATGTCGAAAAATCTGGGTCAATCTACAGAGCGACGGTTGAGGCTCCGATGGGAACTACGGTTCAGGTGAGACCTCAGATTTTGTCCTTCACTCCCGCCGTGGAGAAACAGTCGTTTGAGGTTATTATCTCTACGAGACAGCCGGTGTACGGAGGTTATACTTTCGGGAGCCTCATTTGGTCCGACGGAGTGCATGTCGTTAGAATTCCCTTGTCCGTCCGAATAGAGATTCCACCTAGAGCCTATACATAG 1203 52.78 MGERQQRHDPEIVSRSHHRLLADLLGSVCESLSLDESMVAGKVVLCFTTSSRSSAVISAQAAVKAAGGVGVIAAKNPTNVVMACDHSSFPCIQVDYEIGTRLLFYFRSTSSPKVKLSTSRTVVGKPVSASVSYFSSRGPNSVAPEILKPDIAAPGVNILAATSPLQRGSVGGYSIIYGTSMATPHVSGIVALLKSVHPGWSPAALKSALITTAWNHDPSGLPIFADGATRKPADAFDYGGGIANPNGAARPGLVYDMDTADYLRYLCSMGYNSNGISGLARNETTCPSEKSSLTNLNFPSITIPRLTNSTTVRRTVTNVEKSGSIYRATVEAPMGTTVQVRPQILSFTPAVEKQSFEVIISTRQPVYGGYTFGSLIWSDGVHVVRIPLSVRIEIPPRAYT 400
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 9393661 9396596 - Bma007396.1 Bma12g00418 91844
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00418 400 Gene3D - 266 393 - -
Bma12g00418 400 ProSiteProfiles Serine proteases, subtilase domain profile. 1 249 - -
Bma12g00418 400 ProSitePatterns Serine proteases, subtilase family, serine active site. 178 188 IPR023828 -
Bma12g00418 400 Gene3D - 26 123 - -
Bma12g00418 400 Gene3D Peptidase S8/S53 domain 124 262 IPR036852 GO:0004252|GO:0006508
Bma12g00418 400 Pfam Fibronectin type-III domain 295 390 IPR041469 -
Bma12g00418 400 SUPERFAMILY Subtilisin-like 100 253 IPR036852 GO:0004252|GO:0006508
Bma12g00418 400 CDD PA_subtilisin_like 26 116 - -
Bma12g00418 400 PANTHER SUBTILISIN-LIKE PROTEASE SBT3.1-RELATED 56 393 - -
Bma12g00418 400 PANTHER PEPTIDASE S8 56 393 - -
Bma12g00418 400 Pfam Subtilase family 85 218 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00418 Bma-Chr12:9393661 Bma05g00427 Bma-Chr5:13663105 4.87E-86 dispersed
Bma12g00418 Bma-Chr12:9393661 Bma05g00545 Bma-Chr5:29815588 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00418 - - pop:7455028 452.21