Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00430 ATGGCTTCATTTTCTATGGGTACCCATTTGTGCCCTTCTTATCATCTCAAGAAACGTTTACTTCGCTCCTCCCCTTCTCCTATTTCGCTTGTACCTCAACCTTGTTATGGAAAATCTGTATTTGGAATTACATCTACTAGATCTCTTAGCAATGGCCTTCTAACCAGAGCAGAAGACAAGGCCAAAGATTCTTCCCCGTCCTCTCCCTCATCAGTTCAGCGACCGCAGGCTCGACCCAGCTCAGAAAAACAGCTTGAGGAACAATCATCTCAGTTATGCGACCCTTTATGTTCGGTTGACGAAACAAGCTCGCAGAATTTTGAAGCAAATTACCAGCCAAATACCGATTTTCTAAAAGGTCTTACAGTATTTGCTGCAGCTGCGAGTGGGGCAGCCGCAATTAACCATTCCTGGGTTGCTTCCAATCAGGATCTTGCAATGGCAATATTGTTTGGAATAGGATATGCAGGGATCATATTTGAGGAGTCTCTGGCCTTCAACAAGAGTGGAGTAGGATTACTGATGGCTGTGAGCTTATGGCTTGTCCGCAGTATCGGTGCTCCATCCACTGATGTAGTTATTGCAGAGCTATCACATGCATCTGCGGAAGTAAGTGAAATTGTATTTTTCTTGCTTGGTGCGATGACCATAGTGGAGATTGTTGATGCTCATCAAGGGTTTAAGTTGGTGACCGACAATATTACCACTCGAAAGCCTCGAACTCTCCTTTGGGTGGTCGGATTTGTGACCTTTTTTCTCAGCTCAATTTTAGACAACCTGACGTCCACTATTGTCATGGTTTCTTTGTTGCGGAAACTAGTGCCTCCATCAGAGTATCGCAAACTTCTTGGAGGTGTTGTGGTTATAGCAGCAAATGCAGGGGGTGCATGGACGCCAATTGGAGATGTGACCACTACTATGTTGTGGATAAATGGTCAAATATCTTCGGTGCCGACAATGAAGGGGTTGGTCCTACCATCTGTTATTTCTCTGGCGGTGCCACTGGCTCTTTTCTCTCTTACTAGGTATTTATTTTACTATTGGAGTGAAACTGATGAAAGAAAATATAAATTTAATTTTCTATTTTTCTCCAGTGAAGTAAATGGAAAGGGACAGGACTCTCCAAATGTTTTGGCATCTGAGCAGATGGCTCCTAGAGGGCAACTGGTTTTCTCAGTAGGCATTGGAGCACTCATTTTTGTTCCAGTGTTCAAGGCCCTCACGGGTTTGCCGCCTTACATGGGAATGTTGCTTGGACTTGGAGTTCTTTGGATTCTCACTGATGCTATCCACTTTGGCGAATCTGAAAGACAAAAGTTAAAAGTACCCCAAGCTTTGTCACGTATCGACACTCAAGGAGTTCTTTTCTTCCTTGGAATCCTTTTATCTGTTAGCAGTTTGGAGGCAGCTGGGATTCTTCGAGAATTAGCAAATTACCTAGATGCTCATATTCCTAATGTCGAGCTGATTGCATGTACAATAGGGGTTGTATCGGCAGTTATAGACAATGTGCCACTCGTTGCAGCCACTATGGGAATGTATGATCTCTCGACGTTTCCTAAGGACTCTGAGTTTTGGCAATTGGTGGCATTTTGTGCCGGCACGGGTGGATCTATGCTCTTGATTGGATCTGCAGCCGGAGTAGCATTCATGGGAATGGAGAAGGTCGACTTCTTTTGGTACTTCAAGAAGGTGAGTGCTTTCGCTTTTGCAGGTTATGCAGCCGGAATCGCCACCTATTTAGCCCTTCACAACTTCAACATCTCTCTCCCTAAAACTCTTGCTGAATCGACTTTCATTTCTGGTTCATAA 1812 44.32 MASFSMGTHLCPSYHLKKRLLRSSPSPISLVPQPCYGKSVFGITSTRSLSNGLLTRAEDKAKDSSPSSPSSVQRPQARPSSEKQLEEQSSQLCDPLCSVDETSSQNFEANYQPNTDFLKGLTVFAAAASGAAAINHSWVASNQDLAMAILFGIGYAGIIFEESLAFNKSGVGLLMAVSLWLVRSIGAPSTDVVIAELSHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRKPRTLLWVVGFVTFFLSSILDNLTSTIVMVSLLRKLVPPSEYRKLLGGVVVIAANAGGAWTPIGDVTTTMLWINGQISSVPTMKGLVLPSVISLAVPLALFSLTRYLFYYWSETDERKYKFNFLFFSSEVNGKGQDSPNVLASEQMAPRGQLVFSVGIGALIFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHFGESERQKLKVPQALSRIDTQGVLFFLGILLSVSSLEAAGILRELANYLDAHIPNVELIACTIGVVSAVIDNVPLVAATMGMYDLSTFPKDSEFWQLVAFCAGTGGSMLLIGSAAGVAFMGMEKVDFFWYFKKVSAFAFAGYAAGIATYLALHNFNISLPKTLAESTFISGS 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10867344 10879262 - Bma007429.1 Bma12g00430 91856

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00430 603 MobiDBLite consensus disorder prediction 64 85 - -
Bma12g00430 603 MobiDBLite consensus disorder prediction 57 85 - -
Bma12g00430 603 PANTHER BNAC03G40960D PROTEIN 1 341 - -
Bma12g00430 603 PANTHER BNAC03G40960D PROTEIN 361 603 - -
Bma12g00430 603 Pfam Citrate transporter 156 534 IPR004680 GO:0016021|GO:0055085
Bma12g00430 603 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 361 603 IPR045016 GO:0006814|GO:0015297
Bma12g00430 603 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 1 341 IPR045016 GO:0006814|GO:0015297
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00430 - - - twl:120002987 853.973
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma12g00430 Bma-Chr12:10867344 Bma05g00524 Bma-Chr5:26485074 0 wgd
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Bma11g00421 BCT 1 406 Antiporters AT5G46110 77.3 1.0e-171 599.7
Bma07g00393 BCT 1 294 Antiporters AT5G46110 87.8 5.7e-146 514.2
Bma14g00350 BCT 1 389 Antiporters AT5G54800 75.4 2.2e-160 562.0
Bma07g01308 BCT 1 390 Antiporters AT5G54800 76.1 4.2e-159 557.8
Bma14g01489 . 20 402 Antiporters AT3G01550 61.9 1.4e-122 436.4
Bma14g01504 . 71 402 Antiporters AT3G01550 67.0 8.9e-122 433.7
Bma08g00100 CCT,ECH 56 415 Antiporters AT3G01550 59.9 1.1e-111 400.2
Bma12g01040 BCT,CCT,ECH 56 418 Antiporters AT3G01550 58.0 2.3e-109 392.5
Bma06g00217 BCT,CCT,ECH 71 429 Antiporters AT3G01550 59.0 7.3e-108 387.5
Bma08g00100 CCT,ECH 4 415 Antiporters AT5G33320 69.0 1.7e-150 529.3
Bma06g00217 BCT,CCT,ECH 19 435 Antiporters AT5G33320 67.8 3.6e-145 511.5
Bma12g01040 BCT,CCT,ECH 3 419 Antiporters AT5G33320 65.6 2.9e-142 501.9
Bma14g01489 . 63 402 Antiporters AT5G33320 61.5 1.8e-115 412.9
Bma14g01504 . 75 402 Antiporters AT5G33320 62.8 1.5e-114 409.8
Bma14g00350 BCT 43 390 Antiporters AT1G61800 79.0 5.4e-157 550.8
Bma07g01308 BCT 20 391 Antiporters AT1G61800 74.9 1.9e-154 542.3
Bma14g00350 BCT 85 389 Antiporters AT5G17630 55.5 8.1e-92 334.3
Bma07g01308 BCT 84 390 Antiporters AT5G17630 55.2 1.5e-90 330.1
Bma12g00897 . 37 429 Antiporters AT3G13320 74.4 1.8e-158 555.8
Bma02g01269 . 75 447 Antiporters AT3G13320 76.7 1.5e-157 552.7
Bma09g01003 . 33 405 Antiporters AT3G13320 73.9 4.5e-149 524.6
Bma14g00662 . 2 434 Antiporters AT3G13320 62.8 4.5e-133 471.5
Bma01g01790 . 5 408 Antiporters AT2G38170 73.8 1.4e-164 576.2
Bma01g01790 . 4 376 Antiporters AT3G51860 75.8 6.0e-152 534.3
Bma01g01790 . 12 405 Antiporters AT5G01490 62.4 1.2e-136 483.4
Bma12g00897 . 52 425 Antiporters AT1G55720 74.4 3.7e-151 531.6
Bma02g01269 . 19 447 Antiporters AT1G55720 67.7 1.6e-149 526.2
Bma09g01003 . 25 401 Antiporters AT1G55720 68.3 1.2e-136 483.4
Bma14g00662 . 2 433 Antiporters AT1G55720 62.3 6.4e-127 451.1
Bma01g01790 . 43 405 Antiporters AT1G55720 50.4 1.6e-90 330.1
Bma12g00897 . 55 425 Antiporters AT1G55730 78.3 7.9e-162 567.0
Bma02g01269 . 19 447 Antiporters AT1G55730 70.2 8.7e-161 563.5
Bma09g01003 . 33 406 Antiporters AT1G55730 72.6 2.6e-149 525.4
Bma14g00662 . 10 434 Antiporters AT1G55730 65.6 1.9e-139 492.7
Bma01g01790 . 43 405 Antiporters AT1G55730 52.0 6.8e-97 351.3
Bma05g00316 . 4 537 Antiporters AT5G27150 78.3 3.7e-238 820.8
Bma01g00565 . 1 524 Antiporters AT5G27150 77.0 1.1e-226 782.7
Bma05g01064 . 21 534 Antiporters AT5G27150 72.5 3.5e-212 734.6
Bma09g00716 . 15 526 Antiporters AT5G27150 65.2 7.1e-189 657.1
Bma01g00580 . 12 487 Antiporters AT5G27150 62.6 7.9e-164 573.9
Bma14g00316 . 17 514 Antiporters AT5G27150 56.9 3.1e-152 535.4
Bma05g00316 . 5 540 Antiporters AT3G06370 71.7 2.7e-212 734.9
Bma05g01064 . 21 543 Antiporters AT3G06370 72.8 2.8e-209 724.9
Bma01g00565 . 1 528 Antiporters AT3G06370 70.1 1.7e-201 699.1
Bma09g00716 . 19 532 Antiporters AT3G06370 64.7 1.1e-184 643.3
Bma01g00580 . 3 467 Antiporters AT3G06370 60.7 1.8e-155 546.2
Bma14g00316 . 14 519 Antiporters AT3G06370 56.5 6.4e-145 511.1
Bma14g00316 . 12 522 Antiporters AT5G55470 69.0 5.5e-202 700.7
Bma05g00316 . 18 521 Antiporters AT5G55470 59.6 8.8e-168 587.0
Bma01g00565 . 1 509 Antiporters AT5G55470 58.9 9.1e-165 577.0
Bma05g01064 . 19 521 Antiporters AT5G55470 58.2 6.6e-163 570.9
Bma09g00716 . 1 516 Antiporters AT5G55470 55.3 6.6e-155 544.3
Bma01g00580 . 21 448 Antiporters AT5G55470 60.2 1.1e-146 516.9
Bma05g00316 . 14 536 Antiporters AT3G05030 79.9 1.4e-240 828.9
Bma01g00565 . 1 526 Antiporters AT3G05030 79.8 2.7e-236 814.7
Bma05g01064 . 21 534 Antiporters AT3G05030 74.1 2.1e-217 751.9
Bma09g00716 . 15 526 Antiporters AT3G05030 66.7 1.3e-195 679.5
Bma01g00580 . 12 484 Antiporters AT3G05030 61.7 2.3e-163 572.4
Bma14g00316 . 17 514 Antiporters AT3G05030 57.9 2.6e-154 542.3
Bma02g00032 . 99 653 Antiporters AT1G15460 67.1 4.1e-219 757.7
Bma03g00779 CCT 103 645 Antiporters AT1G15460 56.5 3.4e-173 605.1
Bma13g00097 . 102 636 Antiporters AT1G15460 57.4 2.9e-172 602.1
Bma04g00727 . 112 671 Antiporters AT1G15460 54.9 9.3e-171 597.0
Bma06g00218 CCT 102 431 Antiporters AT1G15460 59.9 9.5e-115 411.0
Bma04g00727 . 3 673 Antiporters AT3G06450 73.1 2.0e-287 984.9
Bma13g00097 . 3 690 Antiporters AT3G06450 69.1 1.1e-280 962.6
Bma03g00779 CCT 4 652 Antiporters AT3G06450 70.8 2.2e-273 938.3
Bma02g00032 . 4 591 Antiporters AT3G06450 58.7 2.8e-212 735.3
Bma06g00218 CCT 3 445 Antiporters AT3G06450 72.5 1.5e-189 659.8
Bma13g00097 . 1 697 Antiporters AT2G47160 78.6 0.0e+00 1113.6
Bma04g00727 . 1 694 Antiporters AT2G47160 74.5 7.8e-308 1052.7
Bma03g00779 CCT 2 704 Antiporters AT2G47160 72.0 6.0e-300 1026.5
Bma02g00032 . 4 639 Antiporters AT2G47160 56.4 9.5e-213 736.9
Bma06g00218 CCT 1 445 Antiporters AT2G47160 75.5 3.2e-208 721.8
Bma02g00032 . 4 653 Antiporters AT1G74810 68.2 3.7e-259 891.0
Bma03g00779 CCT 8 645 Antiporters AT1G74810 58.0 2.3e-213 738.8
Bma13g00097 . 7 636 Antiporters AT1G74810 57.1 4.1e-210 728.0
Bma04g00727 . 1 668 Antiporters AT1G74810 54.6 9.5e-207 716.8
Bma06g00218 CCT 7 431 Antiporters AT1G74810 60.2 1.7e-150 530.0
Bma13g00097 . 1 697 Antiporters AT3G62270 80.5 0.0e+00 1119.0
Bma03g00779 CCT 2 686 Antiporters AT3G62270 76.2 2.7e-305 1044.3
Bma04g00727 . 1 695 Antiporters AT3G62270 74.6 2.5e-303 1037.7
Bma02g00032 . 4 639 Antiporters AT3G62270 57.8 1.0e-216 750.0
Bma06g00218 CCT 1 445 Antiporters AT3G62270 78.7 7.3e-210 727.2
Bma02g00032 . 4 658 Antiporters AT4G32510 70.1 2.2e-272 934.9
Bma04g00727 . 1 653 Antiporters AT4G32510 54.1 8.3e-203 703.7
Bma13g00097 . 1 637 Antiporters AT4G32510 54.4 1.6e-201 699.5
Bma03g00779 CCT 2 651 Antiporters AT4G32510 53.3 4.5e-201 698.0
Bma06g00218 CCT 1 410 Antiporters AT4G32510 58.8 2.0e-148 523.1
Bma02g00032 . 4 647 Antiporters AT5G25430 69.1 2.5e-260 894.8
Bma13g00097 . 7 636 Antiporters AT5G25430 55.9 1.1e-202 703.4
Bma03g00779 CCT 8 645 Antiporters AT5G25430 53.8 3.7e-195 678.3
Bma04g00727 . 7 672 Antiporters AT5G25430 52.1 8.2e-195 677.2
Bma06g00218 CCT 7 431 Antiporters AT5G25430 56.7 2.7e-145 512.7
Bma14g01894 . 1 1139 Antiporters AT2G01980 63.2 0.0e+00 1340.5
Bma14g01894 . 21 735 Antiporters AT1G14660 62.1 8.3e-257 883.2
Bma01g00926 . 58 592 Antiporters AT5G11800 82.5 6.3e-239 823.5
Bma01g02217 . 46 582 Antiporters AT5G11800 80.9 1.2e-237 819.3
Bma07g00532 . 17 594 Antiporters AT5G11800 71.7 5.2e-209 724.2
Bma12g01144 . 50 572 Antiporters AT5G11800 70.8 4.0e-193 671.4
Bma12g01144 . 33 566 Antiporters AT5G51710 83.0 1.4e-240 828.9
Bma01g02217 . 48 555 Antiporters AT5G51710 69.6 1.2e-186 649.8
Bma01g00926 . 53 563 Antiporters AT5G51710 69.2 3.4e-186 648.3
Bma07g00532 . 45 566 Antiporters AT5G51710 66.3 4.4e-173 604.7
Bma01g00926 . 20 592 Antiporters AT2G19600 77.2 1.1e-235 812.8
Bma01g02217 . 10 583 Antiporters AT2G19600 75.1 4.5e-229 790.8
Bma07g00532 . 6 591 Antiporters AT2G19600 74.2 2.9e-220 761.5
Bma12g01144 . 31 563 Antiporters AT2G19600 69.4 3.9e-188 654.8
Bma12g00430 . 147 588 Antiporters AT1G49810 70.5 3.7e-169 591.3
Bma05g00524 . 169 595 Antiporters AT1G49810 71.3 2.4e-168 588.6
Bma05g00524 . 1 611 Antiporters AT3G19490 71.4 1.2e-231 799.3
Bma12g00430 . 1 603 Antiporters AT3G19490 70.7 5.7e-229 790.4
Bma07g01393 . 89 593 Antiporters AT5G12860 86.3 5.9e-247 850.1
Bma03g01546 . 113 583 Antiporters AT5G64280 72.0 2.0e-199 692.2
Bma03g01546 . 112 583 Antiporters AT5G64290 82.4 1.5e-218 755.7
Bma08g00567 . 3 379 Antiporters AT4G28390 82.0 8.8e-178 619.8
Bma09g00848 . 2 389 Antiporters AT4G28390 76.4 5.0e-165 577.4
Bma15g00461 . 2 390 Antiporters AT4G28390 75.8 3.0e-162 568.2
Bma10g00889 . 2 385 Antiporters AT4G28390 75.4 7.5e-161 563.5
Bma10g00896 . 2 385 Antiporters AT4G28390 75.8 2.2e-160 562.0
Bma13g00138 . 3 385 Antiporters AT4G28390 74.2 2.0e-158 555.4
Bma13g00137 . 71 390 Antiporters AT4G28390 79.5 2.3e-146 515.4
Bma06g00434 . 6 305 Antiporters AT4G28390 61.2 1.2e-105 380.2
Bma06g00146 . 5 298 Antiporters AT4G28390 61.4 1.7e-104 376.3
Bma15g00461 . 1 391 Antiporters AT3G08580 79.2 1.6e-171 599.0
Bma09g00848 . 1 390 Antiporters AT3G08580 78.4 6.4e-168 587.0
Bma10g00896 . 1 386 Antiporters AT3G08580 77.9 9.2e-167 583.2
Bma10g00889 . 1 386 Antiporters AT3G08580 77.6 1.2e-166 582.8
Bma13g00138 . 1 386 Antiporters AT3G08580 77.1 2.5e-164 575.1
Bma13g00137 . 1 391 Antiporters AT3G08580 70.1 1.6e-150 529.3
Bma08g00567 . 1 378 Antiporters AT3G08580 69.8 6.2e-147 517.3
Bma06g00434 . 8 299 Antiporters AT3G08580 57.3 7.2e-95 344.4
Bma06g00146 . 7 298 Antiporters AT3G08580 56.7 7.9e-94 340.9
Bma15g00461 . 1 391 Antiporters AT5G13490 82.2 5.1e-181 630.6
Bma09g00848 . 1 390 Antiporters AT5G13490 82.2 1.1e-180 629.4
Bma10g00896 . 1 386 Antiporters AT5G13490 81.2 1.8e-178 622.1
Bma10g00889 . 1 386 Antiporters AT5G13490 80.7 5.3e-178 620.5
Bma13g00138 . 1 386 Antiporters AT5G13490 79.7 2.7e-174 608.2
Bma08g00567 . 1 378 Antiporters AT5G13490 75.1 6.9e-162 567.0
Bma13g00137 . 1 391 Antiporters AT5G13490 73.4 1.5e-161 565.8
Bma06g00434 . 9 305 Antiporters AT5G13490 61.7 7.7e-105 377.5
Bma06g00146 . 8 298 Antiporters AT5G13490 62.0 1.1e-103 373.6
Bma06g00146 . 4 301 Antiporters AT5G17400 75.5 7.0e-133 470.3
Bma06g00434 . 5 301 Antiporters AT5G17400 75.8 9.1e-133 469.9
Bma15g00461 . 87 382 Antiporters AT5G17400 63.2 1.8e-109 392.5
Bma08g00567 . 77 370 Antiporters AT5G17400 62.9 3.2e-109 391.7
Bma09g00848 . 86 376 Antiporters AT5G17400 63.2 2.7e-108 388.7
Bma10g00889 . 82 372 Antiporters AT5G17400 62.5 4.6e-108 387.9
Bma10g00896 . 82 372 Antiporters AT5G17400 62.5 6.0e-108 387.5
Bma13g00138 . 86 372 Antiporters AT5G17400 63.1 2.3e-107 385.6
Bma13g00137 . 81 381 Antiporters AT5G17400 56.8 7.0e-101 364.0
Bma04g01441 . 1 552 Antiporters AT5G17850 51.1 3.1e-147 518.8
Bma13g00082 . 1 521 Antiporters AT2G47600 65.6 2.5e-194 675.2
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0007767 4 1 2 2 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 36
       

Transcriptome

Select Gene Chr Type da1 da2 da3 da4 da5 da6 da7 da8 da9 da10
Bma12g00430 Bma_Chr12 FPKM 0.0 0.0 0.0 0.0 0.38947 0.253081 0.0 0.0 0.0 0.0