Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00435 ATGGCGGCCAATGGCGAAGAGCAGCAAAACCAAGGCGGAAGACACCAGGAGGTCGGCCACAAGAGTCTTTTGCAGAGTGATGCCCTTTACCAGTATATTTTAGAGACTAGTGTGTACCCAAGAGAGCCAGAATCCATGAAAGAACTCAGAGAAGTAACGGCCAAACATCCCTGGTCAGTTGCGTTGAACAGAGATCTTAGATTAACGCTCGAATTTAAACATAAAATTTCTCATTTGGATTATAATATGAACAGGAATCTGATGACAACTTCAGCAGATGAAGGGCAGTTTCTGAACATGCTCTTGAAGCTCATAAACGCCAAGAACACGATGGAGATCGGCGTTTACACCGGCTACTCTCTCCTAGCCACCGCCCTCGCCATTCCCGACGACGGAAAGATTTTGGCGATGGACATTAACCGAGAGAACTACGAACTCGGGCTTCCGATCATTGAAAAAGCTGGCGTTGCCCATAAAATCGAATTCAAAGAAGGTCCGGCTCTTCCTGTTCTCGACCAACTCGTTGAAGACGCAAACAACCACGGAAGCTACGATTTCATCTTCGTGGACGCTGACAAGGACAACTACATCAACTACCACAAACGACTAATCGATCTGGTTAAGGTTGGGGGGATAATCGGGTACGACAACACCCTATGGAACGGATCAGTGGTGGCCCCACCCGATGCACCAATGAGAAAGTATGTTAGGTACTACAGAGACTTTGTGCTGGAGCTCAACAAGGCCCTAGCTGTTGACCCCAGGATTGAGATCTGCATGCTCCCTGTTGGTGATGGGATCACTCTCTGCCGTCGGATCAAGTGA 825 48.24 MAANGEEQQNQGGRHQEVGHKSLLQSDALYQYILETSVYPREPESMKELREVTAKHPWSVALNRDLRLTLEFKHKISHLDYNMNRNLMTTSADEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALAIPDDGKILAMDINRENYELGLPIIEKAGVAHKIEFKEGPALPVLDQLVEDANNHGSYDFIFVDADKDNYINYHKRLIDLVKVGGIIGYDNTLWNGSVVAPPDAPMRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITLCRRIK 274
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 10926811 10928133 - Bma007436.1 Bma12g00435 91861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00435 274 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 22 273 IPR002935 GO:0008171
Bma12g00435 274 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 26 272 IPR029063 -
Bma12g00435 274 Pfam O-methyltransferase 80 273 IPR002935 GO:0008171
Bma12g00435 274 PANTHER O-METHYLTRANSFERASE-RELATED 1 60 - -
Bma12g00435 274 Gene3D Vaccinia Virus protein VP39 21 274 IPR029063 -
Bma12g00435 274 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 82 274 - -
Bma12g00435 274 PANTHER CAFFEOYL-COA O-METHYLTRANSFERASE 1 1 60 - -
Bma12g00435 274 CDD AdoMet_MTases 112 213 - -
Bma12g00435 274 PANTHER O-METHYLTRANSFERASE-RELATED 82 274 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Bma03g00515 Bma12g00435 CCT
Bma08g00803 Bma12g00435 CCT
Bma03g00515 Bma12g00435 ECH
Bma08g00803 Bma12g00435 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma03g00515 Bma-Chr3:3991540 Bma12g00435 Bma-Chr12:10926811 5.23E-112 dispersed
Bma08g00804 Bma-Chr8:45646997 Bma12g00435 Bma-Chr12:10926811 4.44E-09 dispersed
Bma12g00435 Bma-Chr12:10926811 Bma08g00803 Bma-Chr8:45633751 6.18E-123 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00435 K00588 - pop:7457542 458.373