Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00448 ATGGGTATTGCTGCCAATCGTAGGGGCTCGAGAACTATGACGAACCAGGACAGCTTGCTAGTACAAAATGGCGTTCAGACGACGGCGCAGAAAAAATGGACCAATCTGATGCCTTTGGTTGTAGCCCTTGTTGTTATTGCAGAAATTGCCTTTCTGGGTCGCCTCGACATTGTAAAAAATGCTGCGTTGGTCGATTCCTTGGCCGACCTATTCTATCAGTCGCCACCTTCGCGGGAGATGTTGCAGGGTGTTGGTGATTTCAATTCTGGATCTACTCTCGGCGATGAGAATGTTGAATTGGAAAGCTGCGAGGAGTGGTTAGAGAAAGAAGACGCTGTTGTGTATTCTAGAGACTTCGGGAAAGAACCCATCTTAGTTTCTGGTGCTGAGACGGAGTGGAAATCTTGTGCTGTGGGGTGTAAATTTGGATTTAATCCTGATAAGAATCTTGATGCTGCATTTGGTTTTGAAGGGGGAACATATAGTGTAATCCTATCTATGGAATCGGCCAAGTACTATCCAGTGAATGATATTGCATTTGCACGACGGAAAGGTTATAGTGTTATAATGACCACTAGTCTCTCGTCAGATGTTCCTGTTGGATATTTTTCATGGGCTGAGTATGATATCATGGCACCAGTGCGGCCAAAGACTGAGAAGTCCCTTGCAGTTGCTTTTATTTCAAATTGTGGTGCTCTTAACTTTCGGTTGCAAGCTCTTGAGGCTCTTGAAAAGCTGAAAGTCAAGATCGATTCTTATGGACGTTGCCACAGAACTCATGATGGACAAGTGGATAAGGTGGAGACTCTTAGGCGATATAAATTTAGCCTGGCATTTGAAAACTCCAACGAGGAGGATTATGTCACTGAGAAATTTTTCCAATCTCTTGTAGCAGGAACGATTCCGGTTGTGGTTGGAGCGCCAAATATAGAAGATTTTGCTCCTTCTCCTGGTTCGATTATACATATTAAGGAACTGTCAGATGTCGAGGCAGTTGCGAAATCCATGAAGTATCTTTCGGAAAATCCAGATGCGTATAACCAGTCGATGAGGTGGAAATATGAAGGTCCATCTGATTCTTTCAAGGCTCTAGTGGACATGGCAGCTGTTCACTCATCATGCCGCCTTTGCATTCACTTGGCGACTTTGATTCGTGACAAAGAAGAAAAGAGCCCCGCCTTTAAGAAACGCCCTTGCAAGTGTCACAGAGGCTCGGAAACGGTTTACCATTTATTCGTCAGAGAAAGGGGGAGGTTTGATTTGGAGTCCATTTTCTTGAGGTCCGGAAATTTGAGTTTAGAGGCTCTACGGTCAACAGTGGTCGAAAAGTTCAGTTCTCGAAAGCATACTCCGGTATGGAAGGAGGAAAGGCCAGAAAGCATAAGGGGTGGGGATGAGCTGAAAGTGTATAGAATATATCCTGTGGGTTTGACTCAAAGACAGGCTTTGTATACCTTTAGATTTGAACTGGATTCTGATCTCAGAAACCATGTGGAAAGCAATCCTTGTGCAAAGCTTGAAGTCATCTTTGTTTAG 1536 44.27 MGIAANRRGSRTMTNQDSLLVQNGVQTTAQKKWTNLMPLVVALVVIAEIAFLGRLDIVKNAALVDSLADLFYQSPPSREMLQGVGDFNSGSTLGDENVELESCEEWLEKEDAVVYSRDFGKEPILVSGAETEWKSCAVGCKFGFNPDKNLDAAFGFEGGTYSVILSMESAKYYPVNDIAFARRKGYSVIMTTSLSSDVPVGYFSWAEYDIMAPVRPKTEKSLAVAFISNCGALNFRLQALEALEKLKVKIDSYGRCHRTHDGQVDKVETLRRYKFSLAFENSNEEDYVTEKFFQSLVAGTIPVVVGAPNIEDFAPSPGSIIHIKELSDVEAVAKSMKYLSENPDAYNQSMRWKYEGPSDSFKALVDMAAVHSSCRLCIHLATLIRDKEEKSPAFKKRPCKCHRGSETVYHLFVRERGRFDLESIFLRSGNLSLEALRSTVVEKFSSRKHTPVWKEERPESIRGGDELKVYRIYPVGLTQRQALYTFRFELDSDLRNHVESNPCAKLEVIFV 511
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11296475 11302808 - Bma007454.2 Bma12g00448 91874
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00448 511 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 30 489 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bma12g00448 511 PANTHER BNAA06G03030D PROTEIN 30 489 - -
Bma12g00448 511 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 219 382 IPR001503 GO:0006486|GO:0008417|GO:0016020
Bma12g00448 511 Gene3D - 181 360 IPR038577 -
Bma12g00448 511 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 108 386 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma02g00194 Bma-Chr2:1816214 Bma12g00448 Bma-Chr12:11296475 1.39E-17 dispersed
Bma05g00514 Bma-Chr5:25445802 Bma12g00448 Bma-Chr12:11296475 0 dispersed
Bma12g00445 Bma-Chr12:11235371 Bma12g00448 Bma-Chr12:11296475 0 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00448 K00753 - zju:107427081 769.229