Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00454 ATGGAGATTACAGACATTCTCTTTTACCTGGTGATATTTCTCTCTGCACTGCTGCCATGTCTATTCATCAAGAGAGAAAGAAAAGGGGCATCGAAGCTTCCTCCAGGTTCTATGGGGTGGCCCTTCATTGGAGAGACTCTCCAACTCTACTCGCAAGACCCAAATGTCTTCTTCTCCAAGAAGCAAAATAGATATGGAGAAATTTTTAAAACCCACATTCTGGGTGACCCTTGTGTGATGTTAGCAAGCCCTGAGGCTGCACGCCTTGTTCTCCAAACTCATGCTCAGCTATTCAAACCAACTTACCCAAAAAGCAAGGAGAAGCTGATTGGCCCGTCAGCTCTCTTTTTTCACCAAGGCGACTTCCATGCTCACTTGAGAAAGCTTGTCCAAACTTCTCTATCTCCTGACAGAATCCGAAAGCTCATTCCCAGTATCGAAAGTTCAGCCATTTCTGCTCTCGAATCATGGGCTGCTTCCGGGATGGTCATCAACACCTTTCAAGAAATGAAAAAGTTATCGTTCGGTGTTGGCATTCTTGCTACGTTTGGTGAATTGGATGGGAAGTATAAAGAAATGATGAAGGAGAATTACAGCATAGTAGACAAGGGTTACAATTCTTTTCCAACAAATATGCCAGGAACCGCATATGCGAAAGCACTTCAGGCGAGGAAGAGACTGAGCCAAATTATGAGTGAAATAAGGAGGGAGAGGAAAGGGGAGAGAGTGCAGGAGGAGAATGATCTTCTGTTTGACCTTATCAACTTCAAGAATGAAAAGGGACAAACTTTAAGTGAAGAAGAGATTGCTGATAATATCATTGGAGTGCTGTTTGCTGCTCAGGACACAACGGCTAGTGTCCTAACATGGATTCTCAAATACCTCCATGATCATCCCAAGCTTTGTGAAGCTGTTCAGGAAGAGCAAAACTCAATTATTGAAACTAATAATGGTGGAAGCAGGCCTTTGACATGGACTCACATTAAAAACATGCCTATCACGTATAGGGTTGTTTTAGAGAGCTTAAGAATGGCTAGCATCATTTCCTTTACCTTCAGAGAAGCTGTGGTTGATGTGGAATATAAAGGTGAGAATTTCTTTAATTTAATAAATATCATTTATCTGAAAATATTAATTTACTATTTCTTTTGTTTGAATTCAGGATATCTAATTCGAAAAGGTTGGAAAGTGATGCCATTATTCAGAAACATTCATCATAACCCAGAATTTTTCACTGACCCTCAGGCATTCGATCCCGCTAAGGTTGCGCCAAAGCCCAATACATTCATGCCATTTGGCAATGGAGTACATGCTTGCCCTGGAAATGAGCTTGCTAAGCTGGAGATTCTGATTTTACTTCACCATCTTGTAACCAAATTCAGGTGGGAAGTGGTGGGGTTGCAAAGTGGGATTCAATATGCCCCATTTCCAGTTCCTCAACAGGGACTCCCAGCTAGATTCTTTAAGAAATCCATCATTCCCTCTTCTTCTCCATGCTGA 1500 41.87 MEITDILFYLVIFLSALLPCLFIKRERKGASKLPPGSMGWPFIGETLQLYSQDPNVFFSKKQNRYGEIFKTHILGDPCVMLASPEAARLVLQTHAQLFKPTYPKSKEKLIGPSALFFHQGDFHAHLRKLVQTSLSPDRIRKLIPSIESSAISALESWAASGMVINTFQEMKKLSFGVGILATFGELDGKYKEMMKENYSIVDKGYNSFPTNMPGTAYAKALQARKRLSQIMSEIRRERKGERVQEENDLLFDLINFKNEKGQTLSEEEIADNIIGVLFAAQDTTASVLTWILKYLHDHPKLCEAVQEEQNSIIETNNGGSRPLTWTHIKNMPITYRVVLESLRMASIISFTFREAVVDVEYKGENFFNLINIIYLKILIYYFFCLNSGYLIRKGWKVMPLFRNIHHNPEFFTDPQAFDPAKVAPKPNTFMPFGNGVHACPGNELAKLEILILLHHLVTKFRWEVVGLQSGIQYAPFPVPQQGLPARFFKKSIIPSSSPC 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 11694491 11697110 + Bma007465.2 Bma12g00454 91880
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00454 499 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Bma12g00454 499 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS E-class P450 group I signature 288 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS E-class P450 group I signature 268 285 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PANTHER CYTOCHROME P450 26 9 363 - -
Bma12g00454 499 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS P450 superfamily signature 336 347 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS P450 superfamily signature 279 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PRINTS P450 superfamily signature 439 450 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 Gene3D Cytochrome P450 23 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 Pfam Cytochrome P450 34 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 Pfam Cytochrome P450 387 465 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 Coils Coil 217 237 - -
Bma12g00454 499 PANTHER CYTOCHROME P450 26 387 489 - -
Bma12g00454 499 SUPERFAMILY Cytochrome P450 31 489 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Bma12g00454 499 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 387 489 - -
Bma12g00454 499 PANTHER CYTOCHROME P450 FAMILY ABA 8'-HYDROXYLASE 9 363 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma01g00684 Bma-Chr1:6291672 Bma12g00454 Bma-Chr12:11694491 0 dispersed
Bma07g01215 Bma-Chr7:46958253 Bma12g00454 Bma-Chr12:11694491 5.97E-163 dispersed
Bma07g01545 Bma-Chr7:50963017 Bma12g00454 Bma-Chr12:11694491 4.81E-102 dispersed
Bma12g00454 Bma-Chr12:11694491 Bma03g00256 Bma-Chr3:1966144 1.36E-75 dispersed
Bma12g00454 Bma-Chr12:11694491 Bma03g00991 Bma-Chr3:10712519 2.01E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00454 K09843 - tcc:18607939 697.582