Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00577 ATGAAGATGTTTAAGTACTTGGACGTGGTGGGTCAGAAGATACAACACCTTGGCATTGATGGGGTCGATTCACCCAACACAGAGCCATACCCGAATTCTCCATTTTCTCTCCCACCCTTTGATTCACTACCTCCGATTCCTCTCCCCCCAAACGCGCCTCCTTATTGCATTTACCCGCCCAACACTCCTCAAACGCCGGCGATAACTATTCCGACGCCATATGCTTACGCTCCTCCGCCGCCTCCTTTCTACTCCTCTCTCCCTCCTCTTCTTCCCATTTACAATCCACCTCCACCTCCGGCGATAACTATTCCGACGCCTTATGCTTACGCTCCTCCGCCGCCTCCTTTCTACTCCTCTCTCCCTCCTCTTCTTCCCATTTACAATCCACCTCCACCTCCGGCTCCATCGGGGACGATTCCCCCTACCGTGTTCGAGCCGCCCGTGGTGTACCCTCCGCCGTCAGTGCCACCGCCCCCCAACTCGGCTCCAGACATTGCTCGTTGGTGCGTGGCCAAGCCGTCGGTGCCCGACCCCATCATCCAAGAGGCCATGAACTATGCTTGTGGTTCTGGTGCAGACTGCGATTCCATTCAGCCCAATGGCTTCTGCTTTCATCCCGACACATTGTTCGCCCACGCTTCCTTCGCTTTCAACAGCTACTGGCAAAGGACCAAAGTCGCTGGTGGCACCTGCGACTTTGGAGGGACGGCCATGTTTGTCACTGTTGATCCAAGTAACTTCAAACTTTCCACTTCATGCTCTGCCATGTTTTAG 777 54.83 MKMFKYLDVVGQKIQHLGIDGVDSPNTEPYPNSPFSLPPFDSLPPIPLPPNAPPYCIYPPNTPQTPAITIPTPYAYAPPPPPFYSSLPPLLPIYNPPPPPAITIPTPYAYAPPPPPFYSSLPPLLPIYNPPPPPAPSGTIPPTVFEPPVVYPPPSVPPPPNSAPDIARWCVAKPSVPDPIIQEAMNYACGSGADCDSIQPNGFCFHPDTLFAHASFAFNSYWQRTKVAGGTCDFGGTAMFVTVDPSNFKLSTSCSAMF 258
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25021996 25022922 - Bma007738.1 Bma12g00577 92003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00577 258 PANTHER BETA-1,3 GLUCANASE 125 246 IPR044788 -
Bma12g00577 258 Pfam X8 domain 169 239 IPR012946 -
Bma12g00577 258 PANTHER EXTENSIN-LIKE 125 246 - -
Bma12g00577 258 Gene3D - 164 258 - -
Bma12g00577 258 SMART X8_cls 168 256 IPR012946 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Bma06g00348 Bma-Chr6:7740320 Bma12g00577 Bma-Chr12:25021996 4.74E-36 dispersed
Bma07g01106 Bma-Chr7:44208314 Bma12g00577 Bma-Chr12:25021996 6.24E-42 dispersed
Bma12g00577 Bma-Chr12:25021996 Bma12g00970 Bma-Chr12:41688295 2.19E-25 dispersed
Bma12g00577 Bma-Chr12:25021996 Bma07g00899 Bma-Chr7:31377916 6.39E-46 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00577 - - tcc:18602749 175.637