Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bma12g00588 ATGGGGAAGAAAAGCAAAAGCCACAAGCACAAGATACTTCTTCCTCCGGACCTTCCTCCCGATGTTGCTGATGAAGAAATCCAAGTCTCAGACGAGGACTTACAGTTCGTCAACGAAAACCAAGACTACGCCGGCTTTGTTTCTCGCTTGGACACCCAATCCATTACAAAGCATGTTACTCGTGTGGCTGATGTTAAAGAAGATGCTTTGGAAGCATTGTATGAGAAGCGTTTGAAGAAGAAGGCGATGCAAAAAGATAATGAACAGACCAACCATCCAGTTGATCAAGTAGATGCCATTCCTGTTAAAACCCTGGAAGGGAAACTTTACTACCGGAAATTGACAAATATATCAGAAATGAAACAAAGTAGGCAGAACGAAGAGGAAGCTGGTCAGAATGGTGCTGTTGATAATAGTATTGCAAAATTAACTAAAGCAGAACGAAGAGCAAAGCTTAAGAAAAGTAAGAAAGAGCTGAAAAAACAAGGAAAGGAGTTAGATAAAGCAGAAGTTGTTCAACAAACTCCACAGGCAGCAGTTCTGGCTGAGGTTGAGGAAAATCTCACTGCAGAAGAAGCATTTGAGGACAAGAAGCGAAAACTTGCCGAACTAGGGAGTGCACTGCTTGCAGATCCGGAGTCCAATATCAAATCTTTGAGAGAGATGCTGCAGCTCATTAAGGATACAAATCATACCATTGTAAAACTGGGACTGCTATCCTTGTTAACTGTTTTCAAGGACATCATTCCTGGTTATAGGATAAGGCTTCCTACTGAAAAGGAGCTGGAAATGAAAGTTTCAAAGGATGTTAAGAGGATGCGATTTTATGAATCAACACTTCTTTCCTGTTACAAGGTATATTTACAGAAGTTGGTGTCATTGGAGAAGCATTCCTCATTTCGTCATGTAGCTGTGCGCTGTGTCTGTGATTTGGTTGAGGCAGTTCCCCATTTCAACTTCCAAGAGAGCTTGTTAAATATTGTCGTTATGAACATTAGCTCTCCTGATGATATCATAAGAAAGCTCAGTTGCGCTGCTATTAAATCACTTTTTACCAATGAGGGAAAACATGGCGGTGAAGCTACTGTGGATGCTGTTAGGCTGATTGCTAATCAAACCTTCTTGTCCCTGTCCTTCGATGAGGATCTTGGCGGGCCAGAAAAGAAAGAGGTAGATCGAGGAAAAAACAAGAAAAGGAAAAAAGGAAAAAGATTTGAGGCTCACAGTCAATTGGAAGAAGATGAAAAAAAAAAGAGTACTAAAGAAATGAGGATGAGAATAGGGGAGGAGGTTGCTGCTGATTATAGGGCTGCTTCTTTTGCCCCAGATTTAATGAGACGAAGACAGATGCAATCAGATACACTTTCTGCTGTGTTTGAAACATATTTTCGCATTTTGAAGAATACAATGTTGTCAACCGCTATAGAGTCTGGAGCAAATCCTGGTCTATCTGCCGGCGGATCTGGATCGCACCCCCTGCTTGCTCCTTGTTTAAAAGGACTGGGAAAATTTACTCACTTTATTGACTTGGATTTTTTAAGTGACCTTCTGAATTATCTGAGAAGGCTCGCATCTAGTGGTGGCAAGCCCAGTGCATCTTTAGAGAAAATTTCCAAGTGTTTGAGCATATCTGAGCGCCTTCAGTGCTGCATCGTCGCCTTTAAAGTGGTGAAAAAGAATCTGGGTGCTCTGCATATTGATCTACAGGACTTCTTTGTACAGCTATATAATCTTGTACTTGAGTATCGGCCTGGAAGAGATCAAGGTGAAGTGTTGGCTGAAGCATTGAAAGTAATGTTGTGTGAGGATAGACAGCATGACATGCAAAAGGCTGCAGCATTTGTCAAACGCTTGGCTAGTTTCTCATTATGCTTTGGATCTGAAGAGGCCATGGCTGCCTTGGTGACATTAAAGCATCTTCTCCAAAAAAATGTAAAATGCAGAAATTTGTTGGAAAATGATGATGGAGGTGGCTCTGTTTCAGGCTCGATTGCGAAATACCAACAATATGCGACTGATCCCAATTTGAGTGGCGCTCTTGCATCAGTCCTGTGGGAACTAGATCTTCTATCCAGGCATTATCATCCTGCAGTCTCCAAAATGGCTTCGAGCATTTCAAGCATGAACAATGCTAATAACCAAGTTTATGTCTCCACACTTTTCCCTCTGCAAGCATTTACAGAATCCTCGCTTGAACAGGAGACATTCAACCGACAGATTGATGTCCGAAAAGGCAATAAGAAGAGAAAAAGAAGTAGCGAGACCTCCTCGTTAGGTAGCAACCCCAGTGTTTCAGACATAAGTACTATAAATGAAGACGAGGTGAGAAAGAAACTTGGTGATCATTTCATGCTTCTACGGGACATCAAGGAAAATGAAAGACTGAGGGAAGAGTTGCAGCGGACGGCATTATCCTTGCAGGTATACGAAGAATATCGAAAGCAGCTGAAGAAAAAAGGTCAGAGATTAGTGAATTATGGTTGA 2484 41.79 MGKKSKSHKHKILLPPDLPPDVADEEIQVSDEDLQFVNENQDYAGFVSRLDTQSITKHVTRVADVKEDALEALYEKRLKKKAMQKDNEQTNHPVDQVDAIPVKTLEGKLYYRKLTNISEMKQSRQNEEEAGQNGAVDNSIAKLTKAERRAKLKKSKKELKKQGKELDKAEVVQQTPQAAVLAEVEENLTAEEAFEDKKRKLAELGSALLADPESNIKSLREMLQLIKDTNHTIVKLGLLSLLTVFKDIIPGYRIRLPTEKELEMKVSKDVKRMRFYESTLLSCYKVYLQKLVSLEKHSSFRHVAVRCVCDLVEAVPHFNFQESLLNIVVMNISSPDDIIRKLSCAAIKSLFTNEGKHGGEATVDAVRLIANQTFLSLSFDEDLGGPEKKEVDRGKNKKRKKGKRFEAHSQLEEDEKKKSTKEMRMRIGEEVAADYRAASFAPDLMRRRQMQSDTLSAVFETYFRILKNTMLSTAIESGANPGLSAGGSGSHPLLAPCLKGLGKFTHFIDLDFLSDLLNYLRRLASSGGKPSASLEKISKCLSISERLQCCIVAFKVVKKNLGALHIDLQDFFVQLYNLVLEYRPGRDQGEVLAEALKVMLCEDRQHDMQKAAAFVKRLASFSLCFGSEEAMAALVTLKHLLQKNVKCRNLLENDDGGGSVSGSIAKYQQYATDPNLSGALASVLWELDLLSRHYHPAVSKMASSISSMNNANNQVYVSTLFPLQAFTESSLEQETFNRQIDVRKGNKKRKRSSETSSLGSNPSVSDISTINEDEVRKKLGDHFMLLRDIKENERLREELQRTALSLQVYEEYRKQLKKKGQRLVNYG 827
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
12 25994192 26000934 + Bma007756.1 Bma12g00588 92014
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bma12g00588 827 MobiDBLite consensus disorder prediction 743 766 - -
Bma12g00588 827 Pfam Nucleolar complex-associated protein 197 287 IPR011501 -
Bma12g00588 827 Coils Coil 149 172 - -
Bma12g00588 827 SUPERFAMILY ARM repeat 189 709 IPR016024 -
Bma12g00588 827 MobiDBLite consensus disorder prediction 1 22 - -
Bma12g00588 827 MobiDBLite consensus disorder prediction 385 422 - -
Bma12g00588 827 Pfam CBF/Mak21 family 547 702 IPR005612 -
Bma12g00588 827 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 6 768 IPR016903 -
Bma12g00588 827 MobiDBLite consensus disorder prediction 405 422 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bma12g00588 K14834 - jre:109001766 1033.86